Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XDB:G16:G24
Extra
PDB:
ATOM 1 O3' U A 15 -3.250 -0.810 15.573 1.00 51.86 O
ATOM 2 P A A 16 -2.290 -0.127 16.654 1.00 61.05 P
ATOM 3 OP1 A A 16 -0.979 -0.786 16.516 1.00 64.59 O
ATOM 4 OP2 A A 16 -2.958 -0.157 17.969 1.00 70.25 O
ATOM 5 O5' A A 16 -2.236 1.367 16.154 1.00 50.54 O
ATOM 6 C5' A A 16 -1.480 1.782 15.036 1.00 48.62 C
ATOM 7 C4' A A 16 -1.551 3.281 14.933 1.00 52.06 C
ATOM 8 O4' A A 16 -2.930 3.700 14.739 1.00 56.32 O
ATOM 9 C3' A A 16 -1.104 4.031 16.175 1.00 45.72 C
ATOM 10 O3' A A 16 0.296 4.199 16.213 1.00 43.82 O
ATOM 11 C2' A A 16 -1.829 5.349 16.014 1.00 44.57 C
ATOM 12 O2' A A 16 -1.172 6.077 14.997 1.00 49.10 O
ATOM 13 C1' A A 16 -3.174 4.887 15.454 1.00 54.62 C
ATOM 14 N9 A A 16 -4.135 4.601 16.539 1.00 57.09 N
ATOM 15 C8 A A 16 -4.523 3.387 17.034 1.00 54.52 C
ATOM 16 N7 A A 16 -5.379 3.467 18.019 1.00 55.72 N
ATOM 17 C5 A A 16 -5.573 4.826 18.185 1.00 58.66 C
ATOM 18 C6 A A 16 -6.378 5.569 19.063 1.00 58.59 C
ATOM 19 N6 A A 16 -7.175 5.037 19.982 1.00 52.32 N
ATOM 20 N1 A A 16 -6.344 6.910 18.959 1.00 64.30 N
ATOM 21 C2 A A 16 -5.554 7.459 18.031 1.00 68.11 C
ATOM 22 N3 A A 16 -4.755 6.873 17.146 1.00 70.10 N
ATOM 23 C4 A A 16 -4.813 5.536 17.279 1.00 63.95 C
ATOM 24 P C A 17 1.098 4.262 17.592 1.00 59.78 P
ATOM 25 OP1 C A 17 2.475 4.615 17.161 1.00 54.91 O
ATOM 26 OP2 C A 17 0.813 3.008 18.356 1.00 58.69 O
ATOM 27 O5' C A 17 0.453 5.507 18.315 1.00 62.19 O
TER
ATOM 1 O3' A B 23 -2.575 13.117 19.912 1.00 44.18 O
ATOM 2 P G B 24 -3.550 13.876 18.896 1.00 50.21 P
ATOM 3 OP1 G B 24 -2.656 14.399 17.852 1.00 52.44 O
ATOM 4 OP2 G B 24 -4.448 14.770 19.661 1.00 51.17 O
ATOM 5 O5' G B 24 -4.384 12.724 18.231 1.00 51.97 O
ATOM 6 C5' G B 24 -5.534 12.165 18.829 1.00 43.28 C
ATOM 7 C4' G B 24 -6.388 11.576 17.748 1.00 39.09 C
ATOM 8 O4' G B 24 -7.294 10.634 18.358 1.00 48.19 O
ATOM 9 C3' G B 24 -7.255 12.569 16.983 1.00 42.68 C
ATOM 10 O3' G B 24 -7.468 12.067 15.659 1.00 41.57 O
ATOM 11 C2' G B 24 -8.556 12.491 17.774 1.00 46.88 C
ATOM 12 O2' G B 24 -9.704 12.958 17.106 1.00 48.65 O
ATOM 13 C1' G B 24 -8.617 10.994 18.023 1.00 51.60 C
ATOM 14 N9 G B 24 -9.488 10.581 19.115 1.00 56.21 N
ATOM 15 C8 G B 24 -9.915 11.333 20.174 1.00 58.36 C
ATOM 16 N7 G B 24 -10.687 10.658 20.973 1.00 63.45 N
ATOM 17 C5 G B 24 -10.761 9.396 20.405 1.00 60.60 C
ATOM 18 C6 G B 24 -11.456 8.241 20.826 1.00 61.75 C
ATOM 19 O6 G B 24 -12.159 8.107 21.829 1.00 65.22 O
ATOM 20 N1 G B 24 -11.264 7.172 19.957 1.00 61.44 N
ATOM 21 C2 G B 24 -10.491 7.214 18.824 1.00 58.20 C
ATOM 22 N2 G B 24 -10.430 6.071 18.119 1.00 52.86 N
ATOM 23 N3 G B 24 -9.843 8.297 18.414 1.00 54.34 N
ATOM 24 C4 G B 24 -10.025 9.334 19.252 1.00 56.26 C
ATOM 25 P U B 25 -8.037 12.941 14.436 1.00 54.33 P
ATOM 26 OP1 U B 25 -7.642 14.341 14.712 1.00 51.16 O
ATOM 27 OP2 U B 25 -9.463 12.614 14.214 1.00 52.93 O
ATOM 28 O5' U B 25 -7.240 12.352 13.205 1.00 52.27 O
TER
ATOM 2 P A A 16 -2.290 -0.127 16.654 1.00 61.05 P
ATOM 3 OP1 A A 16 -0.979 -0.786 16.516 1.00 64.59 O
ATOM 4 OP2 A A 16 -2.958 -0.157 17.969 1.00 70.25 O
ATOM 5 O5' A A 16 -2.236 1.367 16.154 1.00 50.54 O
ATOM 6 C5' A A 16 -1.480 1.782 15.036 1.00 48.62 C
ATOM 7 C4' A A 16 -1.551 3.281 14.933 1.00 52.06 C
ATOM 8 O4' A A 16 -2.930 3.700 14.739 1.00 56.32 O
ATOM 9 C3' A A 16 -1.104 4.031 16.175 1.00 45.72 C
ATOM 10 O3' A A 16 0.296 4.199 16.213 1.00 43.82 O
ATOM 11 C2' A A 16 -1.829 5.349 16.014 1.00 44.57 C
ATOM 12 O2' A A 16 -1.172 6.077 14.997 1.00 49.10 O
ATOM 13 C1' A A 16 -3.174 4.887 15.454 1.00 54.62 C
ATOM 14 N9 A A 16 -4.135 4.601 16.539 1.00 57.09 N
ATOM 15 C8 A A 16 -4.523 3.387 17.034 1.00 54.52 C
ATOM 16 N7 A A 16 -5.379 3.467 18.019 1.00 55.72 N
ATOM 17 C5 A A 16 -5.573 4.826 18.185 1.00 58.66 C
ATOM 18 C6 A A 16 -6.378 5.569 19.063 1.00 58.59 C
ATOM 19 N6 A A 16 -7.175 5.037 19.982 1.00 52.32 N
ATOM 20 N1 A A 16 -6.344 6.910 18.959 1.00 64.30 N
ATOM 21 C2 A A 16 -5.554 7.459 18.031 1.00 68.11 C
ATOM 22 N3 A A 16 -4.755 6.873 17.146 1.00 70.10 N
ATOM 23 C4 A A 16 -4.813 5.536 17.279 1.00 63.95 C
ATOM 24 P C A 17 1.098 4.262 17.592 1.00 59.78 P
ATOM 25 OP1 C A 17 2.475 4.615 17.161 1.00 54.91 O
ATOM 26 OP2 C A 17 0.813 3.008 18.356 1.00 58.69 O
ATOM 27 O5' C A 17 0.453 5.507 18.315 1.00 62.19 O
TER
ATOM 1 O3' A B 23 -2.575 13.117 19.912 1.00 44.18 O
ATOM 2 P G B 24 -3.550 13.876 18.896 1.00 50.21 P
ATOM 3 OP1 G B 24 -2.656 14.399 17.852 1.00 52.44 O
ATOM 4 OP2 G B 24 -4.448 14.770 19.661 1.00 51.17 O
ATOM 5 O5' G B 24 -4.384 12.724 18.231 1.00 51.97 O
ATOM 6 C5' G B 24 -5.534 12.165 18.829 1.00 43.28 C
ATOM 7 C4' G B 24 -6.388 11.576 17.748 1.00 39.09 C
ATOM 8 O4' G B 24 -7.294 10.634 18.358 1.00 48.19 O
ATOM 9 C3' G B 24 -7.255 12.569 16.983 1.00 42.68 C
ATOM 10 O3' G B 24 -7.468 12.067 15.659 1.00 41.57 O
ATOM 11 C2' G B 24 -8.556 12.491 17.774 1.00 46.88 C
ATOM 12 O2' G B 24 -9.704 12.958 17.106 1.00 48.65 O
ATOM 13 C1' G B 24 -8.617 10.994 18.023 1.00 51.60 C
ATOM 14 N9 G B 24 -9.488 10.581 19.115 1.00 56.21 N
ATOM 15 C8 G B 24 -9.915 11.333 20.174 1.00 58.36 C
ATOM 16 N7 G B 24 -10.687 10.658 20.973 1.00 63.45 N
ATOM 17 C5 G B 24 -10.761 9.396 20.405 1.00 60.60 C
ATOM 18 C6 G B 24 -11.456 8.241 20.826 1.00 61.75 C
ATOM 19 O6 G B 24 -12.159 8.107 21.829 1.00 65.22 O
ATOM 20 N1 G B 24 -11.264 7.172 19.957 1.00 61.44 N
ATOM 21 C2 G B 24 -10.491 7.214 18.824 1.00 58.20 C
ATOM 22 N2 G B 24 -10.430 6.071 18.119 1.00 52.86 N
ATOM 23 N3 G B 24 -9.843 8.297 18.414 1.00 54.34 N
ATOM 24 C4 G B 24 -10.025 9.334 19.252 1.00 56.26 C
ATOM 25 P U B 25 -8.037 12.941 14.436 1.00 54.33 P
ATOM 26 OP1 U B 25 -7.642 14.341 14.712 1.00 51.16 O
ATOM 27 OP2 U B 25 -9.463 12.614 14.214 1.00 52.93 O
ATOM 28 O5' U B 25 -7.240 12.352 13.205 1.00 52.27 O
TER
Atoms:
OP1: (-0.979,-0.786,16.516)
OP2: (-2.958,-0.157,17.969)
C3': (-1.104,4.031,16.175)
C1': (-3.174,4.887,15.454)
C5': (-1.480,1.782,15.036)
O4': (-2.930,3.700,14.739)
C8: (-4.523,3.387,17.034)
O2': (-1.172,6.077,14.997)
C6: (-6.378,5.569,19.063)
C5: (-5.573,4.826,18.185)
C4: (-4.813,5.536,17.279)
P: (-2.290,-0.127,16.654)
C4': (-1.551,3.281,14.933)
C2': (-1.829,5.349,16.014)
C2: (-5.554,7.459,18.031)
N1: (-6.344,6.910,18.959)
N3: (-4.755,6.873,17.146)
N6: (-7.175,5.037,19.982)
N7: (-5.379,3.467,18.019)
N9: (-4.135,4.601,16.539)
O5': (-2.236,1.367,16.154)
O3': (0.296,4.199,16.213)
OP2: (-2.958,-0.157,17.969)
C3': (-1.104,4.031,16.175)
C1': (-3.174,4.887,15.454)
C5': (-1.480,1.782,15.036)
O4': (-2.930,3.700,14.739)
C8: (-4.523,3.387,17.034)
O2': (-1.172,6.077,14.997)
C6: (-6.378,5.569,19.063)
C5: (-5.573,4.826,18.185)
C4: (-4.813,5.536,17.279)
P: (-2.290,-0.127,16.654)
C4': (-1.551,3.281,14.933)
C2': (-1.829,5.349,16.014)
C2: (-5.554,7.459,18.031)
N1: (-6.344,6.910,18.959)
N3: (-4.755,6.873,17.146)
N6: (-7.175,5.037,19.982)
N7: (-5.379,3.467,18.019)
N9: (-4.135,4.601,16.539)
O5': (-2.236,1.367,16.154)
O3': (0.296,4.199,16.213)
OP1: (-2.656,14.399,17.852)
OP2: (-4.448,14.770,19.661)
C3': (-7.255,12.569,16.983)
C1': (-8.617,10.994,18.023)
C5': (-5.534,12.165,18.829)
O6: (-12.159,8.107,21.829)
O4': (-7.294,10.634,18.358)
C8: (-9.915,11.333,20.174)
C2: (-10.491,7.214,18.824)
C6: (-11.456,8.241,20.826)
C5: (-10.761,9.396,20.405)
C4: (-10.025,9.334,19.252)
P: (-3.550,13.876,18.896)
C4': (-6.388,11.576,17.748)
C2': (-8.556,12.491,17.774)
O2': (-9.704,12.958,17.106)
N1: (-11.264,7.172,19.957)
N2: (-10.430,6.071,18.119)
N3: (-9.843,8.297,18.414)
N7: (-10.687,10.658,20.973)
N9: (-9.488,10.581,19.115)
O5': (-4.384,12.724,18.231)
O3': (-7.468,12.067,15.659)
OP2: (-4.448,14.770,19.661)
C3': (-7.255,12.569,16.983)
C1': (-8.617,10.994,18.023)
C5': (-5.534,12.165,18.829)
O6: (-12.159,8.107,21.829)
O4': (-7.294,10.634,18.358)
C8: (-9.915,11.333,20.174)
C2: (-10.491,7.214,18.824)
C6: (-11.456,8.241,20.826)
C5: (-10.761,9.396,20.405)
C4: (-10.025,9.334,19.252)
P: (-3.550,13.876,18.896)
C4': (-6.388,11.576,17.748)
C2': (-8.556,12.491,17.774)
O2': (-9.704,12.958,17.106)
N1: (-11.264,7.172,19.957)
N2: (-10.430,6.071,18.119)
N3: (-9.843,8.297,18.414)
N7: (-10.687,10.658,20.973)
N9: (-9.488,10.581,19.115)
O5': (-4.384,12.724,18.231)
O3': (-7.468,12.067,15.659)
Image (generated by PyMOL):