ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1065:A1217

Extra

PDB:
ATOM 1 O3' C A1064 17.317 112.072 117.445 1.00 42.87 O
ATOM 2 P A A1065 15.765 112.353 117.216 1.00 41.78 P
ATOM 3 OP1 A A1065 15.656 113.379 116.173 1.00 39.43 O
ATOM 4 OP2 A A1065 15.136 112.572 118.532 1.00 43.27 O
ATOM 5 O5' A A1065 15.224 110.989 116.626 1.00 40.74 O
ATOM 6 C5' A A1065 14.085 110.955 115.761 1.00 37.70 C
ATOM 7 C4' A A1065 13.912 109.562 115.232 1.00 38.53 C
ATOM 8 O4' A A1065 15.048 109.216 114.407 1.00 37.35 O
ATOM 9 C3' A A1065 13.908 108.540 116.348 1.00 37.17 C
ATOM 10 O3' A A1065 12.598 108.450 116.857 1.00 36.76 O
ATOM 11 C2' A A1065 14.449 107.286 115.685 1.00 36.47 C
ATOM 12 O2' A A1065 13.454 106.576 114.992 1.00 36.74 O
ATOM 13 C1' A A1065 15.444 107.888 114.687 1.00 37.38 C
ATOM 14 N9 A A1065 16.834 107.920 115.135 1.00 37.60 N
ATOM 15 C8 A A1065 17.541 108.932 115.743 1.00 37.89 C
ATOM 16 N7 A A1065 18.789 108.629 115.982 1.00 38.23 N
ATOM 17 C5 A A1065 18.912 107.330 115.507 1.00 37.73 C
ATOM 18 C6 A A1065 19.996 106.441 115.455 1.00 38.42 C
ATOM 19 N6 A A1065 21.203 106.712 115.951 1.00 39.09 N
ATOM 20 N1 A A1065 19.791 105.235 114.877 1.00 39.74 N
ATOM 21 C2 A A1065 18.569 104.943 114.416 1.00 39.76 C
ATOM 22 N3 A A1065 17.472 105.684 114.430 1.00 39.29 N
ATOM 23 C4 A A1065 17.716 106.884 114.989 1.00 37.92 C
ATOM 24 P A A1066 12.323 108.892 118.356 1.00 37.54 P
ATOM 25 OP1 A A1066 10.958 109.421 118.439 1.00 37.24 O
ATOM 26 OP2 A A1066 13.459 109.726 118.816 1.00 37.50 O
ATOM 27 O5' A A1066 12.350 107.486 119.081 1.00 39.22 O
TER

ATOM 1 O3' C B1216 12.942 104.264 113.314 1.00 44.40 O
ATOM 2 P G B1217 13.010 104.107 111.719 1.00 43.42 P
ATOM 3 OP1 G B1217 12.910 105.479 111.159 1.00 44.06 O
ATOM 4 OP2 G B1217 12.042 103.068 111.303 1.00 42.26 O
ATOM 5 O5' G B1217 14.499 103.624 111.455 1.00 42.92 O
ATOM 6 C5' G B1217 15.596 104.562 111.520 1.00 41.46 C
ATOM 7 C4' G B1217 16.900 103.839 111.323 1.00 41.20 C
ATOM 8 O4' G B1217 16.987 102.768 112.298 1.00 41.88 O
ATOM 9 C3' G B1217 16.979 103.145 109.980 1.00 40.88 C
ATOM 10 O3' G B1217 17.432 104.048 108.981 1.00 39.25 O
ATOM 11 C2' G B1217 17.898 101.960 110.245 1.00 41.73 C
ATOM 12 O2' G B1217 19.253 102.342 110.159 1.00 42.92 O
ATOM 13 C1' G B1217 17.525 101.599 111.693 1.00 42.07 C
ATOM 14 N9 G B1217 16.576 100.496 111.891 1.00 42.08 N
ATOM 15 C8 G B1217 15.201 100.584 111.936 1.00 42.00 C
ATOM 16 N7 G B1217 14.617 99.429 112.107 1.00 43.03 N
ATOM 17 C5 G B1217 15.663 98.519 112.186 1.00 43.02 C
ATOM 18 C6 G B1217 15.640 97.107 112.354 1.00 43.59 C
ATOM 19 O6 G B1217 14.654 96.354 112.438 1.00 45.14 O
ATOM 20 N1 G B1217 16.925 96.581 112.406 1.00 42.64 N
ATOM 21 C2 G B1217 18.081 97.313 112.298 1.00 42.70 C
ATOM 22 N2 G B1217 19.228 96.618 112.403 1.00 42.62 N
ATOM 23 N3 G B1217 18.116 98.625 112.111 1.00 41.95 N
ATOM 24 C4 G B1217 16.881 99.160 112.069 1.00 42.38 C
ATOM 25 P A B1218 16.796 103.975 107.514 1.00 39.81 P
ATOM 26 OP1 A B1218 16.937 105.292 106.828 1.00 39.17 O
ATOM 27 OP2 A B1218 15.467 103.319 107.588 1.00 39.32 O
ATOM 28 O5' A B1218 17.720 102.930 106.770 1.00 37.99 O
TER

Atoms:
OP1: (15.656,113.379,116.173)
OP2: (15.136,112.572,118.532)
C3': (13.908,108.540,116.348)
C1': (15.444,107.888,114.687)
C5': (14.085,110.955,115.761)
O4': (15.048,109.216,114.407)
C8: (17.541,108.932,115.743)
O2': (13.454,106.576,114.992)
C6: (19.996,106.441,115.455)
C5: (18.912,107.330,115.507)
C4: (17.716,106.884,114.989)
P: (15.765,112.353,117.216)
C4': (13.912,109.562,115.232)
C2': (14.449,107.286,115.685)
C2: (18.569,104.943,114.416)
N1: (19.791,105.235,114.877)
N3: (17.472,105.684,114.430)
N6: (21.203,106.712,115.951)
N7: (18.789,108.629,115.982)
N9: (16.834,107.920,115.135)
O5': (15.224,110.989,116.626)
O3': (12.598,108.450,116.857)
OP1: (12.910,105.479,111.159)
OP2: (12.042,103.068,111.303)
C3': (16.979,103.145,109.980)
C1': (17.525,101.599,111.693)
C5': (15.596,104.562,111.520)
O6: (14.654,96.354,112.438)
O4': (16.987,102.768,112.298)
C8: (15.201,100.584,111.936)
C2: (18.081,97.313,112.298)
C6: (15.640,97.107,112.354)
C5: (15.663,98.519,112.186)
C4: (16.881,99.160,112.069)
P: (13.010,104.107,111.719)
C4': (16.900,103.839,111.323)
C2': (17.898,101.960,110.245)
O2': (19.253,102.342,110.159)
N1: (16.925,96.581,112.406)
N2: (19.228,96.618,112.403)
N3: (18.116,98.625,112.111)
N7: (14.617,99.429,112.107)
N9: (16.576,100.496,111.891)
O5': (14.499,103.624,111.455)
O3': (17.432,104.048,108.981)
Image (generated by PyMOL):
PyMOL image
show in jmol