Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0236:0237
Extra
PDB:
ATOM 1 O3' A A 235 91.625 124.012 -8.244 1.00 49.19 O
ATOM 2 P A A 236 91.094 124.753 -9.553 1.00 50.17 P
ATOM 3 OP1 A A 236 92.133 124.594 -10.607 1.00 49.65 O
ATOM 4 OP2 A A 236 90.648 126.112 -9.144 1.00 50.21 O
ATOM 5 O5' A A 236 89.813 123.917 -9.987 1.00 48.66 O
ATOM 6 C5' A A 236 88.621 123.893 -9.180 1.00 45.97 C
ATOM 7 C4' A A 236 87.723 122.785 -9.654 1.00 44.64 C
ATOM 8 O4' A A 236 88.524 121.593 -9.793 1.00 45.04 O
ATOM 9 C3' A A 236 86.591 122.389 -8.726 1.00 44.37 C
ATOM 10 O3' A A 236 85.429 123.156 -9.004 1.00 46.17 O
ATOM 11 C2' A A 236 86.331 120.939 -9.116 1.00 45.02 C
ATOM 12 O2' A A 236 85.457 120.838 -10.220 1.00 44.74 O
ATOM 13 C1' A A 236 87.731 120.460 -9.522 1.00 45.58 C
ATOM 14 N9 A A 236 88.454 119.633 -8.562 1.00 46.84 N
ATOM 15 C8 A A 236 89.018 118.407 -8.798 1.00 48.25 C
ATOM 16 N7 A A 236 89.642 117.904 -7.765 1.00 49.80 N
ATOM 17 C5 A A 236 89.469 118.862 -6.776 1.00 50.16 C
ATOM 18 C6 A A 236 89.893 118.928 -5.443 1.00 51.16 C
ATOM 19 N6 A A 236 90.616 117.974 -4.848 1.00 52.64 N
ATOM 20 N1 A A 236 89.550 120.020 -4.730 1.00 51.67 N
ATOM 21 C2 A A 236 88.831 120.975 -5.327 1.00 51.03 C
ATOM 22 N3 A A 236 88.378 121.029 -6.570 1.00 50.01 N
ATOM 23 C4 A A 236 88.735 119.929 -7.252 1.00 48.83 C
ATOM 24 P G A 237 85.117 124.479 -8.155 1.00 50.40 P
ATOM 25 OP1 G A 237 83.658 124.739 -8.252 1.00 49.66 O
ATOM 26 OP2 G A 237 86.083 125.529 -8.558 1.00 50.58 O
ATOM 27 O5' G A 237 85.446 124.073 -6.653 1.00 52.37 O
TER
ATOM 1 O3' A B 236 85.429 123.156 -9.004 1.00 46.17 O
ATOM 2 P G B 237 85.117 124.479 -8.155 1.00 50.40 P
ATOM 3 OP1 G B 237 83.658 124.739 -8.252 1.00 49.66 O
ATOM 4 OP2 G B 237 86.083 125.529 -8.558 1.00 50.58 O
ATOM 5 O5' G B 237 85.446 124.073 -6.653 1.00 52.37 O
ATOM 6 C5' G B 237 84.698 123.053 -5.980 1.00 51.27 C
ATOM 7 C4' G B 237 84.841 123.222 -4.494 1.00 50.17 C
ATOM 8 O4' G B 237 86.240 123.102 -4.136 1.00 49.16 O
ATOM 9 C3' G B 237 84.441 124.588 -3.965 1.00 49.10 C
ATOM 10 O3' G B 237 83.030 124.654 -3.781 1.00 50.64 O
ATOM 11 C2' G B 237 85.212 124.665 -2.656 1.00 48.80 C
ATOM 12 O2' G B 237 84.582 123.978 -1.596 1.00 48.53 O
ATOM 13 C1' G B 237 86.508 123.935 -3.024 1.00 50.51 C
ATOM 14 N9 G B 237 87.610 124.833 -3.352 1.00 52.23 N
ATOM 15 C8 G B 237 88.178 125.064 -4.581 1.00 53.53 C
ATOM 16 N7 G B 237 89.140 125.946 -4.541 1.00 54.52 N
ATOM 17 C5 G B 237 89.213 126.313 -3.204 1.00 54.14 C
ATOM 18 C6 G B 237 90.064 127.238 -2.546 1.00 54.34 C
ATOM 19 O6 G B 237 90.956 127.945 -3.028 1.00 55.53 O
ATOM 20 N1 G B 237 89.794 127.298 -1.183 1.00 54.19 N
ATOM 21 C2 G B 237 88.831 126.565 -0.536 1.00 54.53 C
ATOM 22 N2 G B 237 88.710 126.756 0.785 1.00 54.03 N
ATOM 23 N3 G B 237 88.037 125.705 -1.136 1.00 55.09 N
ATOM 24 C4 G B 237 88.280 125.630 -2.460 1.00 53.94 C
ATOM 25 P C B 238 82.313 126.073 -3.540 1.00 50.94 P
ATOM 26 OP1 C B 238 80.851 125.822 -3.483 1.00 49.78 O
ATOM 27 OP2 C B 238 82.847 127.048 -4.522 1.00 51.71 O
ATOM 28 O5' C B 238 82.795 126.508 -2.085 1.00 50.16 O
TER
ATOM 2 P A A 236 91.094 124.753 -9.553 1.00 50.17 P
ATOM 3 OP1 A A 236 92.133 124.594 -10.607 1.00 49.65 O
ATOM 4 OP2 A A 236 90.648 126.112 -9.144 1.00 50.21 O
ATOM 5 O5' A A 236 89.813 123.917 -9.987 1.00 48.66 O
ATOM 6 C5' A A 236 88.621 123.893 -9.180 1.00 45.97 C
ATOM 7 C4' A A 236 87.723 122.785 -9.654 1.00 44.64 C
ATOM 8 O4' A A 236 88.524 121.593 -9.793 1.00 45.04 O
ATOM 9 C3' A A 236 86.591 122.389 -8.726 1.00 44.37 C
ATOM 10 O3' A A 236 85.429 123.156 -9.004 1.00 46.17 O
ATOM 11 C2' A A 236 86.331 120.939 -9.116 1.00 45.02 C
ATOM 12 O2' A A 236 85.457 120.838 -10.220 1.00 44.74 O
ATOM 13 C1' A A 236 87.731 120.460 -9.522 1.00 45.58 C
ATOM 14 N9 A A 236 88.454 119.633 -8.562 1.00 46.84 N
ATOM 15 C8 A A 236 89.018 118.407 -8.798 1.00 48.25 C
ATOM 16 N7 A A 236 89.642 117.904 -7.765 1.00 49.80 N
ATOM 17 C5 A A 236 89.469 118.862 -6.776 1.00 50.16 C
ATOM 18 C6 A A 236 89.893 118.928 -5.443 1.00 51.16 C
ATOM 19 N6 A A 236 90.616 117.974 -4.848 1.00 52.64 N
ATOM 20 N1 A A 236 89.550 120.020 -4.730 1.00 51.67 N
ATOM 21 C2 A A 236 88.831 120.975 -5.327 1.00 51.03 C
ATOM 22 N3 A A 236 88.378 121.029 -6.570 1.00 50.01 N
ATOM 23 C4 A A 236 88.735 119.929 -7.252 1.00 48.83 C
ATOM 24 P G A 237 85.117 124.479 -8.155 1.00 50.40 P
ATOM 25 OP1 G A 237 83.658 124.739 -8.252 1.00 49.66 O
ATOM 26 OP2 G A 237 86.083 125.529 -8.558 1.00 50.58 O
ATOM 27 O5' G A 237 85.446 124.073 -6.653 1.00 52.37 O
TER
ATOM 1 O3' A B 236 85.429 123.156 -9.004 1.00 46.17 O
ATOM 2 P G B 237 85.117 124.479 -8.155 1.00 50.40 P
ATOM 3 OP1 G B 237 83.658 124.739 -8.252 1.00 49.66 O
ATOM 4 OP2 G B 237 86.083 125.529 -8.558 1.00 50.58 O
ATOM 5 O5' G B 237 85.446 124.073 -6.653 1.00 52.37 O
ATOM 6 C5' G B 237 84.698 123.053 -5.980 1.00 51.27 C
ATOM 7 C4' G B 237 84.841 123.222 -4.494 1.00 50.17 C
ATOM 8 O4' G B 237 86.240 123.102 -4.136 1.00 49.16 O
ATOM 9 C3' G B 237 84.441 124.588 -3.965 1.00 49.10 C
ATOM 10 O3' G B 237 83.030 124.654 -3.781 1.00 50.64 O
ATOM 11 C2' G B 237 85.212 124.665 -2.656 1.00 48.80 C
ATOM 12 O2' G B 237 84.582 123.978 -1.596 1.00 48.53 O
ATOM 13 C1' G B 237 86.508 123.935 -3.024 1.00 50.51 C
ATOM 14 N9 G B 237 87.610 124.833 -3.352 1.00 52.23 N
ATOM 15 C8 G B 237 88.178 125.064 -4.581 1.00 53.53 C
ATOM 16 N7 G B 237 89.140 125.946 -4.541 1.00 54.52 N
ATOM 17 C5 G B 237 89.213 126.313 -3.204 1.00 54.14 C
ATOM 18 C6 G B 237 90.064 127.238 -2.546 1.00 54.34 C
ATOM 19 O6 G B 237 90.956 127.945 -3.028 1.00 55.53 O
ATOM 20 N1 G B 237 89.794 127.298 -1.183 1.00 54.19 N
ATOM 21 C2 G B 237 88.831 126.565 -0.536 1.00 54.53 C
ATOM 22 N2 G B 237 88.710 126.756 0.785 1.00 54.03 N
ATOM 23 N3 G B 237 88.037 125.705 -1.136 1.00 55.09 N
ATOM 24 C4 G B 237 88.280 125.630 -2.460 1.00 53.94 C
ATOM 25 P C B 238 82.313 126.073 -3.540 1.00 50.94 P
ATOM 26 OP1 C B 238 80.851 125.822 -3.483 1.00 49.78 O
ATOM 27 OP2 C B 238 82.847 127.048 -4.522 1.00 51.71 O
ATOM 28 O5' C B 238 82.795 126.508 -2.085 1.00 50.16 O
TER
Atoms:
OP1: (92.133,124.594,-10.607)
OP2: (90.648,126.112,-9.144)
C3': (86.591,122.389,-8.726)
C1': (87.731,120.460,-9.522)
C5': (88.621,123.893,-9.180)
O4': (88.524,121.593,-9.793)
C8: (89.018,118.407,-8.798)
O2': (85.457,120.838,-10.220)
C6: (89.893,118.928,-5.443)
C5: (89.469,118.862,-6.776)
C4: (88.735,119.929,-7.252)
P: (91.094,124.753,-9.553)
C4': (87.723,122.785,-9.654)
C2': (86.331,120.939,-9.116)
C2: (88.831,120.975,-5.327)
N1: (89.550,120.020,-4.730)
N3: (88.378,121.029,-6.570)
N6: (90.616,117.974,-4.848)
N7: (89.642,117.904,-7.765)
N9: (88.454,119.633,-8.562)
O5': (89.813,123.917,-9.987)
O3': (85.429,123.156,-9.004)
OP2: (90.648,126.112,-9.144)
C3': (86.591,122.389,-8.726)
C1': (87.731,120.460,-9.522)
C5': (88.621,123.893,-9.180)
O4': (88.524,121.593,-9.793)
C8: (89.018,118.407,-8.798)
O2': (85.457,120.838,-10.220)
C6: (89.893,118.928,-5.443)
C5: (89.469,118.862,-6.776)
C4: (88.735,119.929,-7.252)
P: (91.094,124.753,-9.553)
C4': (87.723,122.785,-9.654)
C2': (86.331,120.939,-9.116)
C2: (88.831,120.975,-5.327)
N1: (89.550,120.020,-4.730)
N3: (88.378,121.029,-6.570)
N6: (90.616,117.974,-4.848)
N7: (89.642,117.904,-7.765)
N9: (88.454,119.633,-8.562)
O5': (89.813,123.917,-9.987)
O3': (85.429,123.156,-9.004)
OP1: (83.658,124.739,-8.252)
OP2: (86.083,125.529,-8.558)
C3': (84.441,124.588,-3.965)
C1': (86.508,123.935,-3.024)
C5': (84.698,123.053,-5.980)
O6: (90.956,127.945,-3.028)
O4': (86.240,123.102,-4.136)
C8: (88.178,125.064,-4.581)
C2: (88.831,126.565,-0.536)
C6: (90.064,127.238,-2.546)
C5: (89.213,126.313,-3.204)
C4: (88.280,125.630,-2.460)
P: (85.117,124.479,-8.155)
C4': (84.841,123.222,-4.494)
C2': (85.212,124.665,-2.656)
O2': (84.582,123.978,-1.596)
N1: (89.794,127.298,-1.183)
N2: (88.710,126.756,0.785)
N3: (88.037,125.705,-1.136)
N7: (89.140,125.946,-4.541)
N9: (87.610,124.833,-3.352)
O5': (85.446,124.073,-6.653)
O3': (83.030,124.654,-3.781)
OP2: (86.083,125.529,-8.558)
C3': (84.441,124.588,-3.965)
C1': (86.508,123.935,-3.024)
C5': (84.698,123.053,-5.980)
O6: (90.956,127.945,-3.028)
O4': (86.240,123.102,-4.136)
C8: (88.178,125.064,-4.581)
C2: (88.831,126.565,-0.536)
C6: (90.064,127.238,-2.546)
C5: (89.213,126.313,-3.204)
C4: (88.280,125.630,-2.460)
P: (85.117,124.479,-8.155)
C4': (84.841,123.222,-4.494)
C2': (85.212,124.665,-2.656)
O2': (84.582,123.978,-1.596)
N1: (89.794,127.298,-1.183)
N2: (88.710,126.756,0.785)
N3: (88.037,125.705,-1.136)
N7: (89.140,125.946,-4.541)
N9: (87.610,124.833,-3.352)
O5': (85.446,124.073,-6.653)
O3': (83.030,124.654,-3.781)
Image (generated by PyMOL):