ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A1065:A1217

Extra

PDB:
ATOM 1 O3' C A1064 17.346 112.154 117.427 1.00 38.48 O
ATOM 2 P A A1065 15.805 112.437 117.136 1.00 38.97 P
ATOM 3 OP1 A A1065 15.747 113.448 116.055 1.00 36.22 O
ATOM 4 OP2 A A1065 15.127 112.700 118.423 1.00 39.06 O
ATOM 5 O5' A A1065 15.294 111.054 116.561 1.00 36.54 O
ATOM 6 C5' A A1065 14.113 110.980 115.760 1.00 34.45 C
ATOM 7 C4' A A1065 13.951 109.579 115.256 1.00 34.05 C
ATOM 8 O4' A A1065 15.100 109.223 114.466 1.00 31.71 O
ATOM 9 C3' A A1065 13.939 108.566 116.374 1.00 33.21 C
ATOM 10 O3' A A1065 12.639 108.514 116.893 1.00 33.33 O
ATOM 11 C2' A A1065 14.453 107.301 115.714 1.00 32.25 C
ATOM 12 O2' A A1065 13.473 106.629 114.955 1.00 32.52 O
ATOM 13 C1' A A1065 15.475 107.893 114.747 1.00 32.70 C
ATOM 14 N9 A A1065 16.858 107.912 115.211 1.00 33.19 N
ATOM 15 C8 A A1065 17.562 108.911 115.841 1.00 33.41 C
ATOM 16 N7 A A1065 18.817 108.610 116.056 1.00 33.53 N
ATOM 17 C5 A A1065 18.940 107.321 115.559 1.00 33.79 C
ATOM 18 C6 A A1065 20.021 106.434 115.490 1.00 34.85 C
ATOM 19 N6 A A1065 21.223 106.691 115.993 1.00 36.04 N
ATOM 20 N1 A A1065 19.818 105.242 114.890 1.00 36.54 N
ATOM 21 C2 A A1065 18.592 104.955 114.431 1.00 36.35 C
ATOM 22 N3 A A1065 17.497 105.687 114.469 1.00 35.31 N
ATOM 23 C4 A A1065 17.741 106.879 115.044 1.00 34.15 C
ATOM 24 P A A1066 12.411 108.924 118.400 1.00 34.87 P
ATOM 25 OP1 A A1066 11.069 109.485 118.512 1.00 35.94 O
ATOM 26 OP2 A A1066 13.567 109.736 118.832 1.00 37.38 O
ATOM 27 O5' A A1066 12.443 107.503 119.096 1.00 36.72 O
TER

ATOM 1 O3' C B1216 13.054 104.276 113.340 1.00 42.31 O
ATOM 2 P G B1217 13.065 104.101 111.746 1.00 40.54 P
ATOM 3 OP1 G B1217 12.989 105.455 111.149 1.00 40.42 O
ATOM 4 OP2 G B1217 12.059 103.074 111.390 1.00 40.77 O
ATOM 5 O5' G B1217 14.535 103.599 111.448 1.00 38.89 O
ATOM 6 C5' G B1217 15.629 104.518 111.515 1.00 38.41 C
ATOM 7 C4' G B1217 16.920 103.778 111.333 1.00 38.89 C
ATOM 8 O4' G B1217 16.978 102.700 112.302 1.00 39.85 O
ATOM 9 C3' G B1217 16.988 103.089 109.992 1.00 38.31 C
ATOM 10 O3' G B1217 17.460 104.004 109.029 1.00 36.45 O
ATOM 11 C2' G B1217 17.901 101.900 110.250 1.00 40.49 C
ATOM 12 O2' G B1217 19.264 102.262 110.150 1.00 41.48 O
ATOM 13 C1' G B1217 17.522 101.534 111.697 1.00 40.46 C
ATOM 14 N9 G B1217 16.568 100.438 111.888 1.00 40.80 N
ATOM 15 C8 G B1217 15.193 100.544 111.971 1.00 41.78 C
ATOM 16 N7 G B1217 14.600 99.398 112.164 1.00 42.55 N
ATOM 17 C5 G B1217 15.640 98.478 112.209 1.00 41.20 C
ATOM 18 C6 G B1217 15.610 97.076 112.393 1.00 41.57 C
ATOM 19 O6 G B1217 14.630 96.340 112.550 1.00 42.75 O
ATOM 20 N1 G B1217 16.888 96.537 112.385 1.00 40.61 N
ATOM 21 C2 G B1217 18.046 97.250 112.224 1.00 39.81 C
ATOM 22 N2 G B1217 19.187 96.541 112.284 1.00 40.55 N
ATOM 23 N3 G B1217 18.089 98.556 112.031 1.00 39.79 N
ATOM 24 C4 G B1217 16.860 99.103 112.039 1.00 40.21 C
ATOM 25 P A B1218 16.823 103.991 107.569 1.00 37.34 P
ATOM 26 OP1 A B1218 17.015 105.303 106.916 1.00 38.83 O
ATOM 27 OP2 A B1218 15.475 103.391 107.622 1.00 37.92 O
ATOM 28 O5' A B1218 17.736 102.951 106.814 1.00 37.09 O
TER

Atoms:
OP1: (15.747,113.448,116.055)
OP2: (15.127,112.700,118.423)
C3': (13.939,108.566,116.374)
C1': (15.475,107.893,114.747)
C5': (14.113,110.980,115.760)
O4': (15.100,109.223,114.466)
C8: (17.562,108.911,115.841)
O2': (13.473,106.629,114.955)
C6: (20.021,106.434,115.490)
C5: (18.940,107.321,115.559)
C4: (17.741,106.879,115.044)
P: (15.805,112.437,117.136)
C4': (13.951,109.579,115.256)
C2': (14.453,107.301,115.714)
C2: (18.592,104.955,114.431)
N1: (19.818,105.242,114.890)
N3: (17.497,105.687,114.469)
N6: (21.223,106.691,115.993)
N7: (18.817,108.610,116.056)
N9: (16.858,107.912,115.211)
O5': (15.294,111.054,116.561)
O3': (12.639,108.514,116.893)
OP1: (12.989,105.455,111.149)
OP2: (12.059,103.074,111.390)
C3': (16.988,103.089,109.992)
C1': (17.522,101.534,111.697)
C5': (15.629,104.518,111.515)
O6: (14.630,96.340,112.550)
O4': (16.978,102.700,112.302)
C8: (15.193,100.544,111.971)
C2: (18.046,97.250,112.224)
C6: (15.610,97.076,112.393)
C5: (15.640,98.478,112.209)
C4: (16.860,99.103,112.039)
P: (13.065,104.101,111.746)
C4': (16.920,103.778,111.333)
C2': (17.901,101.900,110.250)
O2': (19.264,102.262,110.150)
N1: (16.888,96.537,112.385)
N2: (19.187,96.541,112.284)
N3: (18.089,98.556,112.031)
N7: (14.600,99.398,112.164)
N9: (16.568,100.438,111.888)
O5': (14.535,103.599,111.448)
O3': (17.460,104.004,109.029)
Image (generated by PyMOL):
PyMOL image
show in jmol