Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VTQ:A13:A21
Extra
PDB:
ATOM 1 P A A 13 18.633 14.933 -0.897 1.00 1.00 P
ATOM 2 OP1 A A 13 19.972 15.620 -0.792 1.00 1.00 O
ATOM 3 OP2 A A 13 18.320 14.035 0.254 1.00 1.00 O
ATOM 4 O5' A A 13 17.499 16.034 -1.151 1.00 1.00 O
ATOM 5 C5' A A 13 17.337 16.980 -0.060 1.00 1.00 C
ATOM 6 C4' A A 13 16.119 17.816 -0.344 1.00 1.00 C
ATOM 7 O4' A A 13 15.057 17.020 -0.852 1.00 1.00 O
ATOM 8 C3' A A 13 15.498 18.462 0.912 1.00 1.00 C
ATOM 9 O3' A A 13 16.263 19.570 1.360 1.00 1.00 O
ATOM 10 C2' A A 13 14.087 18.788 0.404 1.00 1.00 C
ATOM 11 O2' A A 13 14.195 19.965 -0.389 1.00 1.00 O
ATOM 12 C1' A A 13 13.803 17.558 -0.434 1.00 1.00 C
ATOM 13 N9 A A 13 13.098 16.551 0.359 1.00 1.00 N
ATOM 14 C8 A A 13 13.598 15.307 0.688 1.00 1.00 C
ATOM 15 N7 A A 13 12.778 14.586 1.405 1.00 1.00 N
ATOM 16 C5 A A 13 11.675 15.409 1.570 1.00 1.00 C
ATOM 17 C6 A A 13 10.450 15.205 2.257 1.00 1.00 C
ATOM 18 N6 A A 13 10.167 14.090 2.900 1.00 1.00 N
ATOM 19 N1 A A 13 9.582 16.245 2.198 1.00 1.00 N
ATOM 20 C2 A A 13 9.884 17.388 1.525 1.00 1.00 C
ATOM 21 N3 A A 13 11.011 17.653 0.867 1.00 1.00 N
ATOM 22 C4 A A 13 11.861 16.619 0.927 1.00 1.00 C
ATOM 23 P A A 14 17.391 19.353 2.497 1.00 1.00 P
ATOM 24 OP1 A A 14 18.609 20.189 2.272 1.00 1.00 O
ATOM 25 OP2 A A 14 17.711 17.898 2.407 1.00 1.00 O
ATOM 26 O5' A A 14 16.571 19.761 3.812 1.00 1.00 O
TER
ATOM 1 O3' A B 20 3.619 17.694 1.988 1.00 1.00 O
ATOM 2 P G B 21 3.637 17.442 0.404 1.00 1.00 P
ATOM 3 OP1 G B 21 2.382 17.979 -0.209 1.00 1.00 O
ATOM 4 OP2 G B 21 3.649 15.953 0.299 1.00 1.00 O
ATOM 5 O5' G B 21 4.933 18.176 -0.120 1.00 1.00 O
ATOM 6 C5' G B 21 4.939 19.604 -0.434 1.00 1.00 C
ATOM 7 C4' G B 21 6.284 19.829 -1.076 1.00 1.00 C
ATOM 8 O4' G B 21 7.273 19.190 -0.299 1.00 1.00 O
ATOM 9 C3' G B 21 6.440 19.176 -2.452 1.00 1.00 C
ATOM 10 O3' G B 21 5.844 19.931 -3.498 1.00 1.00 O
ATOM 11 C2' G B 21 7.972 19.094 -2.571 1.00 1.00 C
ATOM 12 O2' G B 21 8.436 20.373 -2.915 1.00 1.00 O
ATOM 13 C1' G B 21 8.328 18.720 -1.136 1.00 1.00 C
ATOM 14 N9 G B 21 8.491 17.265 -1.017 1.00 1.00 N
ATOM 15 C8 G B 21 7.646 16.361 -0.419 1.00 1.00 C
ATOM 16 N7 G B 21 8.075 15.123 -0.478 1.00 1.00 N
ATOM 17 C5 G B 21 9.281 15.212 -1.151 1.00 1.00 C
ATOM 18 C6 G B 21 10.227 14.219 -1.525 1.00 1.00 C
ATOM 19 O6 G B 21 10.203 13.002 -1.331 1.00 1.00 O
ATOM 20 N1 G B 21 11.313 14.729 -2.183 1.00 1.00 N
ATOM 21 C2 G B 21 11.475 16.048 -2.467 1.00 1.00 C
ATOM 22 N2 G B 21 12.597 16.368 -3.125 1.00 1.00 N
ATOM 23 N3 G B 21 10.619 17.014 -2.138 1.00 1.00 N
ATOM 24 C4 G B 21 9.546 16.524 -1.480 1.00 1.00 C
ATOM 25 P A B 22 5.234 19.101 -4.754 1.00 1.00 P
ATOM 26 OP1 A B 22 4.613 19.958 -5.801 1.00 1.00 O
ATOM 27 OP2 A B 22 4.227 18.251 -4.051 1.00 1.00 O
ATOM 28 O5' A B 22 6.537 18.360 -5.292 1.00 1.00 O
TER
ATOM 2 OP1 A A 13 19.972 15.620 -0.792 1.00 1.00 O
ATOM 3 OP2 A A 13 18.320 14.035 0.254 1.00 1.00 O
ATOM 4 O5' A A 13 17.499 16.034 -1.151 1.00 1.00 O
ATOM 5 C5' A A 13 17.337 16.980 -0.060 1.00 1.00 C
ATOM 6 C4' A A 13 16.119 17.816 -0.344 1.00 1.00 C
ATOM 7 O4' A A 13 15.057 17.020 -0.852 1.00 1.00 O
ATOM 8 C3' A A 13 15.498 18.462 0.912 1.00 1.00 C
ATOM 9 O3' A A 13 16.263 19.570 1.360 1.00 1.00 O
ATOM 10 C2' A A 13 14.087 18.788 0.404 1.00 1.00 C
ATOM 11 O2' A A 13 14.195 19.965 -0.389 1.00 1.00 O
ATOM 12 C1' A A 13 13.803 17.558 -0.434 1.00 1.00 C
ATOM 13 N9 A A 13 13.098 16.551 0.359 1.00 1.00 N
ATOM 14 C8 A A 13 13.598 15.307 0.688 1.00 1.00 C
ATOM 15 N7 A A 13 12.778 14.586 1.405 1.00 1.00 N
ATOM 16 C5 A A 13 11.675 15.409 1.570 1.00 1.00 C
ATOM 17 C6 A A 13 10.450 15.205 2.257 1.00 1.00 C
ATOM 18 N6 A A 13 10.167 14.090 2.900 1.00 1.00 N
ATOM 19 N1 A A 13 9.582 16.245 2.198 1.00 1.00 N
ATOM 20 C2 A A 13 9.884 17.388 1.525 1.00 1.00 C
ATOM 21 N3 A A 13 11.011 17.653 0.867 1.00 1.00 N
ATOM 22 C4 A A 13 11.861 16.619 0.927 1.00 1.00 C
ATOM 23 P A A 14 17.391 19.353 2.497 1.00 1.00 P
ATOM 24 OP1 A A 14 18.609 20.189 2.272 1.00 1.00 O
ATOM 25 OP2 A A 14 17.711 17.898 2.407 1.00 1.00 O
ATOM 26 O5' A A 14 16.571 19.761 3.812 1.00 1.00 O
TER
ATOM 1 O3' A B 20 3.619 17.694 1.988 1.00 1.00 O
ATOM 2 P G B 21 3.637 17.442 0.404 1.00 1.00 P
ATOM 3 OP1 G B 21 2.382 17.979 -0.209 1.00 1.00 O
ATOM 4 OP2 G B 21 3.649 15.953 0.299 1.00 1.00 O
ATOM 5 O5' G B 21 4.933 18.176 -0.120 1.00 1.00 O
ATOM 6 C5' G B 21 4.939 19.604 -0.434 1.00 1.00 C
ATOM 7 C4' G B 21 6.284 19.829 -1.076 1.00 1.00 C
ATOM 8 O4' G B 21 7.273 19.190 -0.299 1.00 1.00 O
ATOM 9 C3' G B 21 6.440 19.176 -2.452 1.00 1.00 C
ATOM 10 O3' G B 21 5.844 19.931 -3.498 1.00 1.00 O
ATOM 11 C2' G B 21 7.972 19.094 -2.571 1.00 1.00 C
ATOM 12 O2' G B 21 8.436 20.373 -2.915 1.00 1.00 O
ATOM 13 C1' G B 21 8.328 18.720 -1.136 1.00 1.00 C
ATOM 14 N9 G B 21 8.491 17.265 -1.017 1.00 1.00 N
ATOM 15 C8 G B 21 7.646 16.361 -0.419 1.00 1.00 C
ATOM 16 N7 G B 21 8.075 15.123 -0.478 1.00 1.00 N
ATOM 17 C5 G B 21 9.281 15.212 -1.151 1.00 1.00 C
ATOM 18 C6 G B 21 10.227 14.219 -1.525 1.00 1.00 C
ATOM 19 O6 G B 21 10.203 13.002 -1.331 1.00 1.00 O
ATOM 20 N1 G B 21 11.313 14.729 -2.183 1.00 1.00 N
ATOM 21 C2 G B 21 11.475 16.048 -2.467 1.00 1.00 C
ATOM 22 N2 G B 21 12.597 16.368 -3.125 1.00 1.00 N
ATOM 23 N3 G B 21 10.619 17.014 -2.138 1.00 1.00 N
ATOM 24 C4 G B 21 9.546 16.524 -1.480 1.00 1.00 C
ATOM 25 P A B 22 5.234 19.101 -4.754 1.00 1.00 P
ATOM 26 OP1 A B 22 4.613 19.958 -5.801 1.00 1.00 O
ATOM 27 OP2 A B 22 4.227 18.251 -4.051 1.00 1.00 O
ATOM 28 O5' A B 22 6.537 18.360 -5.292 1.00 1.00 O
TER
Atoms:
OP1: (19.972,15.620,-0.792)
OP2: (18.320,14.035,0.254)
C3': (15.498,18.462,0.912)
C1': (13.803,17.558,-0.434)
C5': (17.337,16.980,-0.060)
O4': (15.057,17.020,-0.852)
C8: (13.598,15.307,0.688)
O2': (14.195,19.965,-0.389)
C6: (10.450,15.205,2.257)
C5: (11.675,15.409,1.570)
C4: (11.861,16.619,0.927)
P: (18.633,14.933,-0.897)
C4': (16.119,17.816,-0.344)
C2': (14.087,18.788,0.404)
C2: (9.884,17.388,1.525)
N1: (9.582,16.245,2.198)
N3: (11.011,17.653,0.867)
N6: (10.167,14.090,2.900)
N7: (12.778,14.586,1.405)
N9: (13.098,16.551,0.359)
O5': (17.499,16.034,-1.151)
O3': (16.263,19.570,1.360)
OP2: (18.320,14.035,0.254)
C3': (15.498,18.462,0.912)
C1': (13.803,17.558,-0.434)
C5': (17.337,16.980,-0.060)
O4': (15.057,17.020,-0.852)
C8: (13.598,15.307,0.688)
O2': (14.195,19.965,-0.389)
C6: (10.450,15.205,2.257)
C5: (11.675,15.409,1.570)
C4: (11.861,16.619,0.927)
P: (18.633,14.933,-0.897)
C4': (16.119,17.816,-0.344)
C2': (14.087,18.788,0.404)
C2: (9.884,17.388,1.525)
N1: (9.582,16.245,2.198)
N3: (11.011,17.653,0.867)
N6: (10.167,14.090,2.900)
N7: (12.778,14.586,1.405)
N9: (13.098,16.551,0.359)
O5': (17.499,16.034,-1.151)
O3': (16.263,19.570,1.360)
OP1: (2.382,17.979,-0.209)
OP2: (3.649,15.953,0.299)
C3': (6.440,19.176,-2.452)
C1': (8.328,18.720,-1.136)
C5': (4.939,19.604,-0.434)
O6: (10.203,13.002,-1.331)
O4': (7.273,19.190,-0.299)
C8: (7.646,16.361,-0.419)
C2: (11.475,16.048,-2.467)
C6: (10.227,14.219,-1.525)
C5: (9.281,15.212,-1.151)
C4: (9.546,16.524,-1.480)
P: (3.637,17.442,0.404)
C4': (6.284,19.829,-1.076)
C2': (7.972,19.094,-2.571)
O2': (8.436,20.373,-2.915)
N1: (11.313,14.729,-2.183)
N2: (12.597,16.368,-3.125)
N3: (10.619,17.014,-2.138)
N7: (8.075,15.123,-0.478)
N9: (8.491,17.265,-1.017)
O5': (4.933,18.176,-0.120)
O3': (5.844,19.931,-3.498)
OP2: (3.649,15.953,0.299)
C3': (6.440,19.176,-2.452)
C1': (8.328,18.720,-1.136)
C5': (4.939,19.604,-0.434)
O6: (10.203,13.002,-1.331)
O4': (7.273,19.190,-0.299)
C8: (7.646,16.361,-0.419)
C2: (11.475,16.048,-2.467)
C6: (10.227,14.219,-1.525)
C5: (9.281,15.212,-1.151)
C4: (9.546,16.524,-1.480)
P: (3.637,17.442,0.404)
C4': (6.284,19.829,-1.076)
C2': (7.972,19.094,-2.571)
O2': (8.436,20.373,-2.915)
N1: (11.313,14.729,-2.183)
N2: (12.597,16.368,-3.125)
N3: (10.619,17.014,-2.138)
N7: (8.075,15.123,-0.478)
N9: (8.491,17.265,-1.017)
O5': (4.933,18.176,-0.120)
O3': (5.844,19.931,-3.498)
Image (generated by PyMOL):