Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01111:01176
Extra
PDB:
ATOM 1 O3' G A1110 37.999 80.235 175.074 1.00 82.28 O
ATOM 2 P A A1111 39.362 81.042 175.322 1.00 83.25 P
ATOM 3 OP1 A A1111 40.111 80.371 176.422 1.00 84.28 O
ATOM 4 OP2 A A1111 38.996 82.473 175.455 1.00 82.96 O
ATOM 5 O5' A A1111 40.168 80.834 173.963 1.00 82.13 O
ATOM 6 C5' A A1111 40.538 79.512 173.515 1.00 83.06 C
ATOM 7 C4' A A1111 40.146 79.327 172.070 1.00 84.11 C
ATOM 8 O4' A A1111 38.711 79.485 171.958 1.00 84.63 O
ATOM 9 C3' A A1111 40.729 80.355 171.115 1.00 85.36 C
ATOM 10 O3' A A1111 42.015 79.941 170.659 1.00 86.91 O
ATOM 11 C2' A A1111 39.700 80.390 169.994 1.00 85.06 C
ATOM 12 O2' A A1111 39.856 79.320 169.085 1.00 84.15 O
ATOM 13 C1' A A1111 38.395 80.199 170.776 1.00 85.39 C
ATOM 14 N9 A A1111 37.722 81.441 171.167 1.00 85.20 N
ATOM 15 C8 A A1111 37.627 81.971 172.430 1.00 85.05 C
ATOM 16 N7 A A1111 36.962 83.098 172.484 1.00 85.19 N
ATOM 17 C5 A A1111 36.591 83.329 171.169 1.00 85.22 C
ATOM 18 C6 A A1111 35.869 84.370 170.564 1.00 84.87 C
ATOM 19 N6 A A1111 35.367 85.411 171.233 1.00 84.37 N
ATOM 20 N1 A A1111 35.677 84.305 169.229 1.00 84.85 N
ATOM 21 C2 A A1111 36.181 83.260 168.558 1.00 84.82 C
ATOM 22 N3 A A1111 36.876 82.221 169.014 1.00 85.09 N
ATOM 23 C4 A A1111 37.050 82.316 170.345 1.00 85.48 C
ATOM 24 P C A1112 43.308 80.842 170.980 1.00 88.39 P
ATOM 25 OP1 C A1112 44.487 80.108 170.439 1.00 87.18 O
ATOM 26 OP2 C A1112 43.281 81.236 172.420 1.00 87.21 O
ATOM 27 O5' C A1112 43.090 82.147 170.092 1.00 87.89 O
TER
ATOM 1 O3' G B1175 33.806 86.278 164.426 1.00 87.89 O
ATOM 2 P G B1176 34.895 86.637 163.299 1.00 86.47 P
ATOM 3 OP1 G B1176 35.217 88.078 163.447 1.00 86.78 O
ATOM 4 OP2 G B1176 34.400 86.127 161.996 1.00 86.43 O
ATOM 5 O5' G B1176 36.181 85.797 163.723 1.00 86.26 O
ATOM 6 C5' G B1176 36.877 86.084 164.949 1.00 85.70 C
ATOM 7 C4' G B1176 38.006 85.102 165.162 1.00 85.83 C
ATOM 8 O4' G B1176 37.473 83.763 165.321 1.00 85.99 O
ATOM 9 C3' G B1176 38.996 84.948 164.021 1.00 85.83 C
ATOM 10 O3' G B1176 39.960 85.992 164.006 1.00 85.32 O
ATOM 11 C2' G B1176 39.633 83.598 164.329 1.00 85.99 C
ATOM 12 O2' G B1176 40.630 83.670 165.330 1.00 87.27 O
ATOM 13 C1' G B1176 38.433 82.818 164.868 1.00 85.94 C
ATOM 14 N9 G B1176 37.814 81.943 163.877 1.00 86.12 N
ATOM 15 C8 G B1176 36.588 82.093 163.273 1.00 86.47 C
ATOM 16 N7 G B1176 36.306 81.129 162.439 1.00 86.21 N
ATOM 17 C5 G B1176 37.414 80.295 162.490 1.00 85.80 C
ATOM 18 C6 G B1176 37.687 79.087 161.800 1.00 85.97 C
ATOM 19 O6 G B1176 36.978 78.492 160.978 1.00 85.62 O
ATOM 20 N1 G B1176 38.931 78.571 162.148 1.00 85.75 N
ATOM 21 C2 G B1176 39.801 79.147 163.042 1.00 86.36 C
ATOM 22 N2 G B1176 40.957 78.504 163.245 1.00 88.11 N
ATOM 23 N3 G B1176 39.559 80.272 163.690 1.00 85.63 N
ATOM 24 C4 G B1176 38.356 80.787 163.369 1.00 85.87 C
ATOM 25 P U B1177 40.780 86.292 162.661 1.00 84.45 P
ATOM 26 OP1 U B1177 41.664 87.469 162.882 1.00 84.29 O
ATOM 27 OP2 U B1177 39.769 86.322 161.569 1.00 83.90 O
ATOM 28 O5' U B1177 41.704 85.005 162.479 1.00 82.58 O
TER
ATOM 2 P A A1111 39.362 81.042 175.322 1.00 83.25 P
ATOM 3 OP1 A A1111 40.111 80.371 176.422 1.00 84.28 O
ATOM 4 OP2 A A1111 38.996 82.473 175.455 1.00 82.96 O
ATOM 5 O5' A A1111 40.168 80.834 173.963 1.00 82.13 O
ATOM 6 C5' A A1111 40.538 79.512 173.515 1.00 83.06 C
ATOM 7 C4' A A1111 40.146 79.327 172.070 1.00 84.11 C
ATOM 8 O4' A A1111 38.711 79.485 171.958 1.00 84.63 O
ATOM 9 C3' A A1111 40.729 80.355 171.115 1.00 85.36 C
ATOM 10 O3' A A1111 42.015 79.941 170.659 1.00 86.91 O
ATOM 11 C2' A A1111 39.700 80.390 169.994 1.00 85.06 C
ATOM 12 O2' A A1111 39.856 79.320 169.085 1.00 84.15 O
ATOM 13 C1' A A1111 38.395 80.199 170.776 1.00 85.39 C
ATOM 14 N9 A A1111 37.722 81.441 171.167 1.00 85.20 N
ATOM 15 C8 A A1111 37.627 81.971 172.430 1.00 85.05 C
ATOM 16 N7 A A1111 36.962 83.098 172.484 1.00 85.19 N
ATOM 17 C5 A A1111 36.591 83.329 171.169 1.00 85.22 C
ATOM 18 C6 A A1111 35.869 84.370 170.564 1.00 84.87 C
ATOM 19 N6 A A1111 35.367 85.411 171.233 1.00 84.37 N
ATOM 20 N1 A A1111 35.677 84.305 169.229 1.00 84.85 N
ATOM 21 C2 A A1111 36.181 83.260 168.558 1.00 84.82 C
ATOM 22 N3 A A1111 36.876 82.221 169.014 1.00 85.09 N
ATOM 23 C4 A A1111 37.050 82.316 170.345 1.00 85.48 C
ATOM 24 P C A1112 43.308 80.842 170.980 1.00 88.39 P
ATOM 25 OP1 C A1112 44.487 80.108 170.439 1.00 87.18 O
ATOM 26 OP2 C A1112 43.281 81.236 172.420 1.00 87.21 O
ATOM 27 O5' C A1112 43.090 82.147 170.092 1.00 87.89 O
TER
ATOM 1 O3' G B1175 33.806 86.278 164.426 1.00 87.89 O
ATOM 2 P G B1176 34.895 86.637 163.299 1.00 86.47 P
ATOM 3 OP1 G B1176 35.217 88.078 163.447 1.00 86.78 O
ATOM 4 OP2 G B1176 34.400 86.127 161.996 1.00 86.43 O
ATOM 5 O5' G B1176 36.181 85.797 163.723 1.00 86.26 O
ATOM 6 C5' G B1176 36.877 86.084 164.949 1.00 85.70 C
ATOM 7 C4' G B1176 38.006 85.102 165.162 1.00 85.83 C
ATOM 8 O4' G B1176 37.473 83.763 165.321 1.00 85.99 O
ATOM 9 C3' G B1176 38.996 84.948 164.021 1.00 85.83 C
ATOM 10 O3' G B1176 39.960 85.992 164.006 1.00 85.32 O
ATOM 11 C2' G B1176 39.633 83.598 164.329 1.00 85.99 C
ATOM 12 O2' G B1176 40.630 83.670 165.330 1.00 87.27 O
ATOM 13 C1' G B1176 38.433 82.818 164.868 1.00 85.94 C
ATOM 14 N9 G B1176 37.814 81.943 163.877 1.00 86.12 N
ATOM 15 C8 G B1176 36.588 82.093 163.273 1.00 86.47 C
ATOM 16 N7 G B1176 36.306 81.129 162.439 1.00 86.21 N
ATOM 17 C5 G B1176 37.414 80.295 162.490 1.00 85.80 C
ATOM 18 C6 G B1176 37.687 79.087 161.800 1.00 85.97 C
ATOM 19 O6 G B1176 36.978 78.492 160.978 1.00 85.62 O
ATOM 20 N1 G B1176 38.931 78.571 162.148 1.00 85.75 N
ATOM 21 C2 G B1176 39.801 79.147 163.042 1.00 86.36 C
ATOM 22 N2 G B1176 40.957 78.504 163.245 1.00 88.11 N
ATOM 23 N3 G B1176 39.559 80.272 163.690 1.00 85.63 N
ATOM 24 C4 G B1176 38.356 80.787 163.369 1.00 85.87 C
ATOM 25 P U B1177 40.780 86.292 162.661 1.00 84.45 P
ATOM 26 OP1 U B1177 41.664 87.469 162.882 1.00 84.29 O
ATOM 27 OP2 U B1177 39.769 86.322 161.569 1.00 83.90 O
ATOM 28 O5' U B1177 41.704 85.005 162.479 1.00 82.58 O
TER
Atoms:
OP1: (40.111,80.371,176.422)
OP2: (38.996,82.473,175.455)
C3': (40.729,80.355,171.115)
C1': (38.395,80.199,170.776)
C5': (40.538,79.512,173.515)
O4': (38.711,79.485,171.958)
C8: (37.627,81.971,172.430)
O2': (39.856,79.320,169.085)
C6: (35.869,84.370,170.564)
C5: (36.591,83.329,171.169)
C4: (37.050,82.316,170.345)
P: (39.362,81.042,175.322)
C4': (40.146,79.327,172.070)
C2': (39.700,80.390,169.994)
C2: (36.181,83.260,168.558)
N1: (35.677,84.305,169.229)
N3: (36.876,82.221,169.014)
N6: (35.367,85.411,171.233)
N7: (36.962,83.098,172.484)
N9: (37.722,81.441,171.167)
O5': (40.168,80.834,173.963)
O3': (42.015,79.941,170.659)
OP2: (38.996,82.473,175.455)
C3': (40.729,80.355,171.115)
C1': (38.395,80.199,170.776)
C5': (40.538,79.512,173.515)
O4': (38.711,79.485,171.958)
C8: (37.627,81.971,172.430)
O2': (39.856,79.320,169.085)
C6: (35.869,84.370,170.564)
C5: (36.591,83.329,171.169)
C4: (37.050,82.316,170.345)
P: (39.362,81.042,175.322)
C4': (40.146,79.327,172.070)
C2': (39.700,80.390,169.994)
C2: (36.181,83.260,168.558)
N1: (35.677,84.305,169.229)
N3: (36.876,82.221,169.014)
N6: (35.367,85.411,171.233)
N7: (36.962,83.098,172.484)
N9: (37.722,81.441,171.167)
O5': (40.168,80.834,173.963)
O3': (42.015,79.941,170.659)
OP1: (35.217,88.078,163.447)
OP2: (34.400,86.127,161.996)
C3': (38.996,84.948,164.021)
C1': (38.433,82.818,164.868)
C5': (36.877,86.084,164.949)
O6: (36.978,78.492,160.978)
O4': (37.473,83.763,165.321)
C8: (36.588,82.093,163.273)
C2: (39.801,79.147,163.042)
C6: (37.687,79.087,161.800)
C5: (37.414,80.295,162.490)
C4: (38.356,80.787,163.369)
P: (34.895,86.637,163.299)
C4': (38.006,85.102,165.162)
C2': (39.633,83.598,164.329)
O2': (40.630,83.670,165.330)
N1: (38.931,78.571,162.148)
N2: (40.957,78.504,163.245)
N3: (39.559,80.272,163.690)
N7: (36.306,81.129,162.439)
N9: (37.814,81.943,163.877)
O5': (36.181,85.797,163.723)
O3': (39.960,85.992,164.006)
OP2: (34.400,86.127,161.996)
C3': (38.996,84.948,164.021)
C1': (38.433,82.818,164.868)
C5': (36.877,86.084,164.949)
O6: (36.978,78.492,160.978)
O4': (37.473,83.763,165.321)
C8: (36.588,82.093,163.273)
C2: (39.801,79.147,163.042)
C6: (37.687,79.087,161.800)
C5: (37.414,80.295,162.490)
C4: (38.356,80.787,163.369)
P: (34.895,86.637,163.299)
C4': (38.006,85.102,165.162)
C2': (39.633,83.598,164.329)
O2': (40.630,83.670,165.330)
N1: (38.931,78.571,162.148)
N2: (40.957,78.504,163.245)
N3: (39.559,80.272,163.690)
N7: (36.306,81.129,162.439)
N9: (37.814,81.943,163.877)
O5': (36.181,85.797,163.723)
O3': (39.960,85.992,164.006)
Image (generated by PyMOL):