ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTL:0236:0237

Extra

PDB:
ATOM 1 O3' A A 235 91.798 124.333 -8.028 1.00 66.59 O
ATOM 2 P A A 236 91.322 125.078 -9.365 1.00 68.96 P
ATOM 3 OP1 A A 236 92.401 124.887 -10.382 1.00 68.48 O
ATOM 4 OP2 A A 236 90.893 126.452 -8.985 1.00 68.80 O
ATOM 5 O5' A A 236 90.028 124.272 -9.842 1.00 67.18 O
ATOM 6 C5' A A 236 88.807 124.269 -9.070 1.00 64.30 C
ATOM 7 C4' A A 236 87.927 123.122 -9.513 1.00 63.41 C
ATOM 8 O4' A A 236 88.738 121.924 -9.582 1.00 63.59 O
ATOM 9 C3' A A 236 86.789 122.759 -8.574 1.00 63.22 C
ATOM 10 O3' A A 236 85.624 123.539 -8.858 1.00 64.99 O
ATOM 11 C2' A A 236 86.541 121.282 -8.891 1.00 62.40 C
ATOM 12 O2' A A 236 85.661 121.078 -9.975 1.00 60.97 O
ATOM 13 C1' A A 236 87.939 120.796 -9.289 1.00 62.07 C
ATOM 14 N9 A A 236 88.667 119.968 -8.333 1.00 62.27 N
ATOM 15 C8 A A 236 89.290 118.774 -8.591 1.00 62.97 C
ATOM 16 N7 A A 236 89.927 118.274 -7.559 1.00 63.37 N
ATOM 17 C5 A A 236 89.697 119.195 -6.547 1.00 63.04 C
ATOM 18 C6 A A 236 90.114 119.249 -5.205 1.00 62.92 C
ATOM 19 N6 A A 236 90.896 118.327 -4.631 1.00 61.57 N
ATOM 20 N1 A A 236 89.699 120.302 -4.463 1.00 63.95 N
ATOM 21 C2 A A 236 88.926 121.235 -5.045 1.00 63.57 C
ATOM 22 N3 A A 236 88.480 121.299 -6.298 1.00 63.24 N
ATOM 23 C4 A A 236 88.906 120.237 -7.006 1.00 63.22 C
ATOM 24 P G A 237 85.290 124.847 -7.978 1.00 67.19 P
ATOM 25 OP1 G A 237 83.816 125.041 -8.034 1.00 64.68 O
ATOM 26 OP2 G A 237 86.191 125.954 -8.389 1.00 66.61 O
ATOM 27 O5' G A 237 85.699 124.440 -6.490 1.00 68.75 O
TER

ATOM 1 O3' A B 236 85.624 123.539 -8.858 1.00 64.99 O
ATOM 2 P G B 237 85.290 124.847 -7.978 1.00 67.19 P
ATOM 3 OP1 G B 237 83.816 125.041 -8.034 1.00 64.68 O
ATOM 4 OP2 G B 237 86.191 125.954 -8.389 1.00 66.61 O
ATOM 5 O5' G B 237 85.699 124.440 -6.490 1.00 68.75 O
ATOM 6 C5' G B 237 85.015 123.381 -5.796 1.00 68.04 C
ATOM 7 C4' G B 237 85.171 123.551 -4.305 1.00 67.59 C
ATOM 8 O4' G B 237 86.569 123.424 -3.940 1.00 68.67 O
ATOM 9 C3' G B 237 84.769 124.903 -3.743 1.00 66.15 C
ATOM 10 O3' G B 237 83.365 124.964 -3.537 1.00 64.67 O
ATOM 11 C2' G B 237 85.529 124.937 -2.426 1.00 67.08 C
ATOM 12 O2' G B 237 84.881 124.191 -1.418 1.00 67.98 O
ATOM 13 C1' G B 237 86.834 124.234 -2.809 1.00 68.45 C
ATOM 14 N9 G B 237 87.901 125.166 -3.147 1.00 69.55 N
ATOM 15 C8 G B 237 88.494 125.356 -4.372 1.00 70.84 C
ATOM 16 N7 G B 237 89.409 126.290 -4.358 1.00 70.93 N
ATOM 17 C5 G B 237 89.423 126.738 -3.044 1.00 70.67 C
ATOM 18 C6 G B 237 90.206 127.744 -2.421 1.00 70.27 C
ATOM 19 O6 G B 237 91.075 128.466 -2.922 1.00 70.04 O
ATOM 20 N1 G B 237 89.894 127.871 -1.073 1.00 70.82 N
ATOM 21 C2 G B 237 88.952 127.126 -0.405 1.00 71.11 C
ATOM 22 N2 G B 237 88.798 127.392 0.899 1.00 72.19 N
ATOM 23 N3 G B 237 88.216 126.187 -0.972 1.00 70.52 N
ATOM 24 C4 G B 237 88.501 126.048 -2.283 1.00 70.59 C
ATOM 25 P C B 238 82.647 126.386 -3.346 1.00 64.15 P
ATOM 26 OP1 C B 238 81.184 126.153 -3.409 1.00 64.45 O
ATOM 27 OP2 C B 238 83.273 127.351 -4.287 1.00 63.50 O
ATOM 28 O5' C B 238 83.031 126.813 -1.857 1.00 63.21 O
TER

Atoms:
OP1: (92.401,124.887,-10.382)
OP2: (90.893,126.452,-8.985)
C3': (86.789,122.759,-8.574)
C1': (87.939,120.796,-9.289)
C5': (88.807,124.269,-9.070)
O4': (88.738,121.924,-9.582)
C8: (89.290,118.774,-8.591)
O2': (85.661,121.078,-9.975)
C6: (90.114,119.249,-5.205)
C5: (89.697,119.195,-6.547)
C4: (88.906,120.237,-7.006)
P: (91.322,125.078,-9.365)
C4': (87.927,123.122,-9.513)
C2': (86.541,121.282,-8.891)
C2: (88.926,121.235,-5.045)
N1: (89.699,120.302,-4.463)
N3: (88.480,121.299,-6.298)
N6: (90.896,118.327,-4.631)
N7: (89.927,118.274,-7.559)
N9: (88.667,119.968,-8.333)
O5': (90.028,124.272,-9.842)
O3': (85.624,123.539,-8.858)
OP1: (83.816,125.041,-8.034)
OP2: (86.191,125.954,-8.389)
C3': (84.769,124.903,-3.743)
C1': (86.834,124.234,-2.809)
C5': (85.015,123.381,-5.796)
O6: (91.075,128.466,-2.922)
O4': (86.569,123.424,-3.940)
C8: (88.494,125.356,-4.372)
C2: (88.952,127.126,-0.405)
C6: (90.206,127.744,-2.421)
C5: (89.423,126.738,-3.044)
C4: (88.501,126.048,-2.283)
P: (85.290,124.847,-7.978)
C4': (85.171,123.551,-4.305)
C2': (85.529,124.937,-2.426)
O2': (84.881,124.191,-1.418)
N1: (89.894,127.871,-1.073)
N2: (88.798,127.392,0.899)
N3: (88.216,126.187,-0.972)
N7: (89.409,126.290,-4.358)
N9: (87.901,125.166,-3.147)
O5': (85.699,124.440,-6.490)
O3': (83.365,124.964,-3.537)
Image (generated by PyMOL):
PyMOL image
show in jmol