Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12395:11070
Extra
PDB:
ATOM 1 O3' A A2394 32.291 -29.406 50.725 1.00 36.99 O
ATOM 2 P A A2395 30.792 -29.555 51.353 1.00 36.82 P
ATOM 3 OP1 A A2395 30.954 -29.343 52.771 1.00 36.64 O
ATOM 4 OP2 A A2395 30.199 -30.836 50.898 1.00 37.08 O
ATOM 5 O5' A A2395 30.000 -28.341 50.706 1.00 36.78 O
ATOM 6 C5' A A2395 30.055 -27.066 51.289 1.00 36.57 C
ATOM 7 C4' A A2395 29.215 -26.105 50.531 1.00 36.59 C
ATOM 8 O4' A A2395 29.633 -26.057 49.141 1.00 36.72 O
ATOM 9 C3' A A2395 27.747 -26.439 50.461 1.00 36.74 C
ATOM 10 O3' A A2395 27.055 -26.063 51.654 1.00 36.62 O
ATOM 11 C2' A A2395 27.297 -25.654 49.234 1.00 36.83 C
ATOM 12 O2' A A2395 27.082 -24.327 49.580 1.00 36.67 O
ATOM 13 C1' A A2395 28.527 -25.726 48.326 1.00 36.86 C
ATOM 14 N9 A A2395 28.365 -26.775 47.329 1.00 37.11 N
ATOM 15 C8 A A2395 28.566 -28.088 47.620 1.00 37.22 C
ATOM 16 N7 A A2395 28.310 -28.847 46.601 1.00 37.47 N
ATOM 17 C5 A A2395 27.887 -27.988 45.589 1.00 37.53 C
ATOM 18 C6 A A2395 27.432 -28.222 44.278 1.00 37.79 C
ATOM 19 N6 A A2395 27.336 -29.459 43.720 1.00 38.04 N
ATOM 20 N1 A A2395 27.083 -27.124 43.550 1.00 37.80 N
ATOM 21 C2 A A2395 27.148 -25.921 44.108 1.00 37.57 C
ATOM 22 N3 A A2395 27.566 -25.633 45.343 1.00 37.32 N
ATOM 23 C4 A A2395 27.923 -26.707 46.035 1.00 37.31 C
ATOM 24 P C A2396 26.839 -27.097 52.887 1.00 39.73 P
ATOM 25 OP1 C A2396 27.526 -26.513 54.055 1.00 39.50 O
ATOM 26 OP2 C A2396 27.222 -28.449 52.414 1.00 39.91 O
ATOM 27 O5' C A2396 25.276 -27.034 53.125 1.00 39.82 O
TER
ATOM 1 O3' U B1069 25.229 -26.785 38.273 1.00 38.30 O
ATOM 2 P G B1070 24.122 -25.648 37.990 1.00 37.47 P
ATOM 3 OP1 G B1070 22.854 -26.395 37.751 1.00 37.73 O
ATOM 4 OP2 G B1070 24.631 -24.679 36.884 1.00 37.54 O
ATOM 5 O5' G B1070 24.040 -24.881 39.372 1.00 37.14 O
ATOM 6 C5' G B1070 23.347 -25.404 40.472 1.00 37.06 C
ATOM 7 C4' G B1070 23.370 -24.418 41.612 1.00 36.76 C
ATOM 8 O4' G B1070 24.747 -24.118 41.977 1.00 36.54 O
ATOM 9 C3' G B1070 22.806 -23.054 41.317 1.00 36.74 C
ATOM 10 O3' G B1070 21.389 -23.014 41.303 1.00 36.89 O
ATOM 11 C2' G B1070 23.457 -22.204 42.412 1.00 36.41 C
ATOM 12 O2' G B1070 22.871 -22.462 43.677 1.00 36.29 O
ATOM 13 C1' G B1070 24.855 -22.786 42.423 1.00 36.33 C
ATOM 14 N9 G B1070 25.739 -22.063 41.513 1.00 36.33 N
ATOM 15 C8 G B1070 26.077 -22.474 40.265 1.00 36.55 C
ATOM 16 N7 G B1070 26.864 -21.604 39.730 1.00 36.50 N
ATOM 17 C5 G B1070 27.050 -20.591 40.649 1.00 36.25 C
ATOM 18 C6 G B1070 27.803 -19.419 40.567 1.00 36.11 C
ATOM 19 O6 G B1070 28.492 -19.004 39.634 1.00 36.19 O
ATOM 20 N1 G B1070 27.677 -18.684 41.721 1.00 35.88 N
ATOM 21 C2 G B1070 26.963 -19.051 42.816 1.00 35.78 C
ATOM 22 N2 G B1070 27.004 -18.232 43.863 1.00 35.56 N
ATOM 23 N3 G B1070 26.269 -20.159 42.883 1.00 35.91 N
ATOM 24 C4 G B1070 26.358 -20.869 41.763 1.00 36.14 C
ATOM 25 P G B1071 20.638 -22.309 40.089 1.00 42.90 P
ATOM 26 OP1 G B1071 19.195 -22.491 40.297 1.00 43.05 O
ATOM 27 OP2 G B1071 21.231 -22.819 38.844 1.00 43.11 O
ATOM 28 O5' G B1071 21.024 -20.793 40.288 1.00 42.70 O
TER
ATOM 2 P A A2395 30.792 -29.555 51.353 1.00 36.82 P
ATOM 3 OP1 A A2395 30.954 -29.343 52.771 1.00 36.64 O
ATOM 4 OP2 A A2395 30.199 -30.836 50.898 1.00 37.08 O
ATOM 5 O5' A A2395 30.000 -28.341 50.706 1.00 36.78 O
ATOM 6 C5' A A2395 30.055 -27.066 51.289 1.00 36.57 C
ATOM 7 C4' A A2395 29.215 -26.105 50.531 1.00 36.59 C
ATOM 8 O4' A A2395 29.633 -26.057 49.141 1.00 36.72 O
ATOM 9 C3' A A2395 27.747 -26.439 50.461 1.00 36.74 C
ATOM 10 O3' A A2395 27.055 -26.063 51.654 1.00 36.62 O
ATOM 11 C2' A A2395 27.297 -25.654 49.234 1.00 36.83 C
ATOM 12 O2' A A2395 27.082 -24.327 49.580 1.00 36.67 O
ATOM 13 C1' A A2395 28.527 -25.726 48.326 1.00 36.86 C
ATOM 14 N9 A A2395 28.365 -26.775 47.329 1.00 37.11 N
ATOM 15 C8 A A2395 28.566 -28.088 47.620 1.00 37.22 C
ATOM 16 N7 A A2395 28.310 -28.847 46.601 1.00 37.47 N
ATOM 17 C5 A A2395 27.887 -27.988 45.589 1.00 37.53 C
ATOM 18 C6 A A2395 27.432 -28.222 44.278 1.00 37.79 C
ATOM 19 N6 A A2395 27.336 -29.459 43.720 1.00 38.04 N
ATOM 20 N1 A A2395 27.083 -27.124 43.550 1.00 37.80 N
ATOM 21 C2 A A2395 27.148 -25.921 44.108 1.00 37.57 C
ATOM 22 N3 A A2395 27.566 -25.633 45.343 1.00 37.32 N
ATOM 23 C4 A A2395 27.923 -26.707 46.035 1.00 37.31 C
ATOM 24 P C A2396 26.839 -27.097 52.887 1.00 39.73 P
ATOM 25 OP1 C A2396 27.526 -26.513 54.055 1.00 39.50 O
ATOM 26 OP2 C A2396 27.222 -28.449 52.414 1.00 39.91 O
ATOM 27 O5' C A2396 25.276 -27.034 53.125 1.00 39.82 O
TER
ATOM 1 O3' U B1069 25.229 -26.785 38.273 1.00 38.30 O
ATOM 2 P G B1070 24.122 -25.648 37.990 1.00 37.47 P
ATOM 3 OP1 G B1070 22.854 -26.395 37.751 1.00 37.73 O
ATOM 4 OP2 G B1070 24.631 -24.679 36.884 1.00 37.54 O
ATOM 5 O5' G B1070 24.040 -24.881 39.372 1.00 37.14 O
ATOM 6 C5' G B1070 23.347 -25.404 40.472 1.00 37.06 C
ATOM 7 C4' G B1070 23.370 -24.418 41.612 1.00 36.76 C
ATOM 8 O4' G B1070 24.747 -24.118 41.977 1.00 36.54 O
ATOM 9 C3' G B1070 22.806 -23.054 41.317 1.00 36.74 C
ATOM 10 O3' G B1070 21.389 -23.014 41.303 1.00 36.89 O
ATOM 11 C2' G B1070 23.457 -22.204 42.412 1.00 36.41 C
ATOM 12 O2' G B1070 22.871 -22.462 43.677 1.00 36.29 O
ATOM 13 C1' G B1070 24.855 -22.786 42.423 1.00 36.33 C
ATOM 14 N9 G B1070 25.739 -22.063 41.513 1.00 36.33 N
ATOM 15 C8 G B1070 26.077 -22.474 40.265 1.00 36.55 C
ATOM 16 N7 G B1070 26.864 -21.604 39.730 1.00 36.50 N
ATOM 17 C5 G B1070 27.050 -20.591 40.649 1.00 36.25 C
ATOM 18 C6 G B1070 27.803 -19.419 40.567 1.00 36.11 C
ATOM 19 O6 G B1070 28.492 -19.004 39.634 1.00 36.19 O
ATOM 20 N1 G B1070 27.677 -18.684 41.721 1.00 35.88 N
ATOM 21 C2 G B1070 26.963 -19.051 42.816 1.00 35.78 C
ATOM 22 N2 G B1070 27.004 -18.232 43.863 1.00 35.56 N
ATOM 23 N3 G B1070 26.269 -20.159 42.883 1.00 35.91 N
ATOM 24 C4 G B1070 26.358 -20.869 41.763 1.00 36.14 C
ATOM 25 P G B1071 20.638 -22.309 40.089 1.00 42.90 P
ATOM 26 OP1 G B1071 19.195 -22.491 40.297 1.00 43.05 O
ATOM 27 OP2 G B1071 21.231 -22.819 38.844 1.00 43.11 O
ATOM 28 O5' G B1071 21.024 -20.793 40.288 1.00 42.70 O
TER
Atoms:
OP1: (30.954,-29.343,52.771)
OP2: (30.199,-30.836,50.898)
C3': (27.747,-26.439,50.461)
C1': (28.527,-25.726,48.326)
C5': (30.055,-27.066,51.289)
O4': (29.633,-26.057,49.141)
C8: (28.566,-28.088,47.620)
O2': (27.082,-24.327,49.580)
C6: (27.432,-28.222,44.278)
C5: (27.887,-27.988,45.589)
C4: (27.923,-26.707,46.035)
P: (30.792,-29.555,51.353)
C4': (29.215,-26.105,50.531)
C2': (27.297,-25.654,49.234)
C2: (27.148,-25.921,44.108)
N1: (27.083,-27.124,43.550)
N3: (27.566,-25.633,45.343)
N6: (27.336,-29.459,43.720)
N7: (28.310,-28.847,46.601)
N9: (28.365,-26.775,47.329)
O5': (30.000,-28.341,50.706)
O3': (27.055,-26.063,51.654)
OP2: (30.199,-30.836,50.898)
C3': (27.747,-26.439,50.461)
C1': (28.527,-25.726,48.326)
C5': (30.055,-27.066,51.289)
O4': (29.633,-26.057,49.141)
C8: (28.566,-28.088,47.620)
O2': (27.082,-24.327,49.580)
C6: (27.432,-28.222,44.278)
C5: (27.887,-27.988,45.589)
C4: (27.923,-26.707,46.035)
P: (30.792,-29.555,51.353)
C4': (29.215,-26.105,50.531)
C2': (27.297,-25.654,49.234)
C2: (27.148,-25.921,44.108)
N1: (27.083,-27.124,43.550)
N3: (27.566,-25.633,45.343)
N6: (27.336,-29.459,43.720)
N7: (28.310,-28.847,46.601)
N9: (28.365,-26.775,47.329)
O5': (30.000,-28.341,50.706)
O3': (27.055,-26.063,51.654)
OP1: (22.854,-26.395,37.751)
OP2: (24.631,-24.679,36.884)
C3': (22.806,-23.054,41.317)
C1': (24.855,-22.786,42.423)
C5': (23.347,-25.404,40.472)
O6: (28.492,-19.004,39.634)
O4': (24.747,-24.118,41.977)
C8: (26.077,-22.474,40.265)
C2: (26.963,-19.051,42.816)
C6: (27.803,-19.419,40.567)
C5: (27.050,-20.591,40.649)
C4: (26.358,-20.869,41.763)
P: (24.122,-25.648,37.990)
C4': (23.370,-24.418,41.612)
C2': (23.457,-22.204,42.412)
O2': (22.871,-22.462,43.677)
N1: (27.677,-18.684,41.721)
N2: (27.004,-18.232,43.863)
N3: (26.269,-20.159,42.883)
N7: (26.864,-21.604,39.730)
N9: (25.739,-22.063,41.513)
O5': (24.040,-24.881,39.372)
O3': (21.389,-23.014,41.303)
OP2: (24.631,-24.679,36.884)
C3': (22.806,-23.054,41.317)
C1': (24.855,-22.786,42.423)
C5': (23.347,-25.404,40.472)
O6: (28.492,-19.004,39.634)
O4': (24.747,-24.118,41.977)
C8: (26.077,-22.474,40.265)
C2: (26.963,-19.051,42.816)
C6: (27.803,-19.419,40.567)
C5: (27.050,-20.591,40.649)
C4: (26.358,-20.869,41.763)
P: (24.122,-25.648,37.990)
C4': (23.370,-24.418,41.612)
C2': (23.457,-22.204,42.412)
O2': (22.871,-22.462,43.677)
N1: (27.677,-18.684,41.721)
N2: (27.004,-18.232,43.863)
N3: (26.269,-20.159,42.883)
N7: (26.864,-21.604,39.730)
N9: (25.739,-22.063,41.513)
O5': (24.040,-24.881,39.372)
O3': (21.389,-23.014,41.303)
Image (generated by PyMOL):