ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01065:01217

Extra

PDB:
ATOM 1 O3' C A1064 16.948 111.880 117.222 1.00 40.59 O
ATOM 2 P A A1065 15.409 112.129 116.842 1.00 41.50 P
ATOM 3 OP1 A A1065 15.278 113.459 116.199 1.00 39.21 O
ATOM 4 OP2 A A1065 14.600 111.818 118.043 1.00 42.98 O
ATOM 5 O5' A A1065 15.150 111.007 115.744 1.00 39.17 O
ATOM 6 C5' A A1065 13.862 110.820 115.144 1.00 38.36 C
ATOM 7 C4' A A1065 13.696 109.376 114.736 1.00 38.84 C
ATOM 8 O4' A A1065 14.835 108.976 113.933 1.00 38.24 O
ATOM 9 C3' A A1065 13.695 108.398 115.893 1.00 38.55 C
ATOM 10 O3' A A1065 12.381 108.284 116.389 1.00 39.99 O
ATOM 11 C2' A A1065 14.191 107.108 115.254 1.00 37.73 C
ATOM 12 O2' A A1065 13.178 106.427 114.544 1.00 36.54 O
ATOM 13 C1' A A1065 15.214 107.650 114.257 1.00 37.00 C
ATOM 14 N9 A A1065 16.597 107.695 114.729 1.00 36.63 N
ATOM 15 C8 A A1065 17.241 108.757 115.319 1.00 36.91 C
ATOM 16 N7 A A1065 18.506 108.535 115.565 1.00 38.01 N
ATOM 17 C5 A A1065 18.707 107.232 115.125 1.00 37.19 C
ATOM 18 C6 A A1065 19.846 106.411 115.094 1.00 37.12 C
ATOM 19 N6 A A1065 21.042 106.796 115.533 1.00 38.46 N
ATOM 20 N1 A A1065 19.713 105.167 114.589 1.00 37.75 N
ATOM 21 C2 A A1065 18.512 104.784 114.147 1.00 38.77 C
ATOM 22 N3 A A1065 17.367 105.464 114.121 1.00 38.46 N
ATOM 23 C4 A A1065 17.536 106.698 114.627 1.00 36.98 C
ATOM 24 P A A1066 12.061 108.726 117.891 1.00 42.77 P
ATOM 25 OP1 A A1066 10.692 109.308 117.910 1.00 42.25 O
ATOM 26 OP2 A A1066 13.208 109.535 118.388 1.00 41.38 O
ATOM 27 O5' A A1066 12.042 107.340 118.670 1.00 40.45 O
TER

ATOM 1 O3' C B1216 12.706 104.019 112.931 1.00 40.29 O
ATOM 2 P G B1217 12.725 103.823 111.341 1.00 39.44 P
ATOM 3 OP1 G B1217 12.528 105.183 110.789 1.00 37.98 O
ATOM 4 OP2 G B1217 11.791 102.720 110.956 1.00 37.87 O
ATOM 5 O5' G B1217 14.213 103.355 111.025 1.00 38.19 O
ATOM 6 C5' G B1217 15.325 104.248 111.201 1.00 37.74 C
ATOM 7 C4' G B1217 16.617 103.518 110.933 1.00 37.72 C
ATOM 8 O4' G B1217 16.816 102.478 111.924 1.00 38.05 O
ATOM 9 C3' G B1217 16.662 102.805 109.594 1.00 36.26 C
ATOM 10 O3' G B1217 17.098 103.723 108.605 1.00 36.63 O
ATOM 11 C2' G B1217 17.661 101.682 109.846 1.00 36.74 C
ATOM 12 O2' G B1217 19.005 102.098 109.744 1.00 35.42 O
ATOM 13 C1' G B1217 17.355 101.325 111.305 1.00 37.62 C
ATOM 14 N9 G B1217 16.380 100.252 111.460 1.00 38.98 N
ATOM 15 C8 G B1217 15.011 100.380 111.492 1.00 40.10 C
ATOM 16 N7 G B1217 14.394 99.244 111.660 1.00 40.81 N
ATOM 17 C5 G B1217 15.415 98.309 111.741 1.00 40.80 C
ATOM 18 C6 G B1217 15.360 96.907 111.934 1.00 42.46 C
ATOM 19 O6 G B1217 14.360 96.185 112.077 1.00 43.61 O
ATOM 20 N1 G B1217 16.636 96.345 111.957 1.00 42.01 N
ATOM 21 C2 G B1217 17.812 97.045 111.817 1.00 39.87 C
ATOM 22 N2 G B1217 18.941 96.327 111.873 1.00 37.65 N
ATOM 23 N3 G B1217 17.874 98.353 111.639 1.00 39.63 N
ATOM 24 C4 G B1217 16.648 98.917 111.613 1.00 39.45 C
ATOM 25 P A B1218 16.458 103.695 107.139 1.00 37.62 P
ATOM 26 OP1 A B1218 16.816 104.981 106.492 1.00 35.92 O
ATOM 27 OP2 A B1218 15.036 103.286 107.216 1.00 38.72 O
ATOM 28 O5' A B1218 17.261 102.535 106.412 1.00 36.33 O
TER

Atoms:
OP1: (15.278,113.459,116.199)
OP2: (14.600,111.818,118.043)
C3': (13.695,108.398,115.893)
C1': (15.214,107.650,114.257)
C5': (13.862,110.820,115.144)
O4': (14.835,108.976,113.933)
C8: (17.241,108.757,115.319)
O2': (13.178,106.427,114.544)
C6: (19.846,106.411,115.094)
C5: (18.707,107.232,115.125)
C4: (17.536,106.698,114.627)
P: (15.409,112.129,116.842)
C4': (13.696,109.376,114.736)
C2': (14.191,107.108,115.254)
C2: (18.512,104.784,114.147)
N1: (19.713,105.167,114.589)
N3: (17.367,105.464,114.121)
N6: (21.042,106.796,115.533)
N7: (18.506,108.535,115.565)
N9: (16.597,107.695,114.729)
O5': (15.150,111.007,115.744)
O3': (12.381,108.284,116.389)
OP1: (12.528,105.183,110.789)
OP2: (11.791,102.720,110.956)
C3': (16.662,102.805,109.594)
C1': (17.355,101.325,111.305)
C5': (15.325,104.248,111.201)
O6: (14.360,96.185,112.077)
O4': (16.816,102.478,111.924)
C8: (15.011,100.380,111.492)
C2: (17.812,97.045,111.817)
C6: (15.360,96.907,111.934)
C5: (15.415,98.309,111.741)
C4: (16.648,98.917,111.613)
P: (12.725,103.823,111.341)
C4': (16.617,103.518,110.933)
C2': (17.661,101.682,109.846)
O2': (19.005,102.098,109.744)
N1: (16.636,96.345,111.957)
N2: (18.941,96.327,111.873)
N3: (17.874,98.353,111.639)
N7: (14.394,99.244,111.660)
N9: (16.380,100.252,111.460)
O5': (14.213,103.355,111.025)
O3': (17.098,103.723,108.605)
Image (generated by PyMOL):
PyMOL image
show in jmol