Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:060:046
Extra
PDB:
ATOM 1 O3' A A 59 53.787 161.491 31.404 1.00 56.45 O
ATOM 2 P A A 60 52.806 161.685 32.684 1.00 55.16 P
ATOM 3 OP1 A A 60 52.094 162.977 32.559 1.00 55.36 O
ATOM 4 OP2 A A 60 53.549 161.390 33.923 1.00 57.10 O
ATOM 5 O5' A A 60 51.729 160.523 32.518 1.00 55.67 O
ATOM 6 C5' A A 60 50.341 160.745 32.827 1.00 58.63 C
ATOM 7 C4' A A 60 49.578 159.437 32.797 1.00 60.69 C
ATOM 8 O4' A A 60 50.108 158.546 33.814 1.00 60.96 O
ATOM 9 C3' A A 60 48.086 159.549 33.084 1.00 62.45 C
ATOM 10 O3' A A 60 47.375 158.532 32.387 1.00 65.42 O
ATOM 11 C2' A A 60 48.011 159.294 34.582 1.00 62.21 C
ATOM 12 O2' A A 60 46.756 158.770 34.958 1.00 63.49 O
ATOM 13 C1' A A 60 49.110 158.252 34.770 1.00 61.38 C
ATOM 14 N9 A A 60 49.742 158.290 36.089 1.00 62.24 N
ATOM 15 C8 A A 60 49.806 157.274 37.005 1.00 62.82 C
ATOM 16 N7 A A 60 50.491 157.574 38.080 1.00 63.32 N
ATOM 17 C5 A A 60 50.893 158.882 37.866 1.00 63.07 C
ATOM 18 C6 A A 60 51.664 159.768 38.632 1.00 63.03 C
ATOM 19 N6 A A 60 52.186 159.455 39.818 1.00 63.32 N
ATOM 20 N1 A A 60 51.886 161.002 38.131 1.00 62.17 N
ATOM 21 C2 A A 60 51.367 161.309 36.941 1.00 62.31 C
ATOM 22 N3 A A 60 50.628 160.562 36.126 1.00 62.97 N
ATOM 23 C4 A A 60 50.426 159.344 36.652 1.00 62.67 C
ATOM 24 P G A 61 46.880 158.794 30.878 1.00 67.38 P
ATOM 25 OP1 G A 61 46.258 160.152 30.790 1.00 65.84 O
ATOM 26 OP2 G A 61 46.105 157.594 30.444 1.00 67.24 O
ATOM 27 O5' G A 61 48.244 158.823 30.067 1.00 64.71 O
TER
ATOM 1 O3' U B 45 55.665 165.835 36.211 1.00 62.80 O
ATOM 2 P G B 46 54.631 166.751 37.031 1.00 62.77 P
ATOM 3 OP1 G B 46 54.264 167.890 36.149 1.00 62.94 O
ATOM 4 OP2 G B 46 55.195 167.024 38.370 1.00 64.88 O
ATOM 5 O5' G B 46 53.356 165.818 37.195 1.00 62.47 O
ATOM 6 C5' G B 46 52.655 165.355 36.040 1.00 62.19 C
ATOM 7 C4' G B 46 51.174 165.460 36.257 1.00 62.71 C
ATOM 8 O4' G B 46 50.741 164.382 37.123 1.00 63.26 O
ATOM 9 C3' G B 46 50.671 166.751 36.893 1.00 63.00 C
ATOM 10 O3' G B 46 49.418 167.090 36.306 1.00 65.10 O
ATOM 11 C2' G B 46 50.474 166.349 38.352 1.00 61.56 C
ATOM 12 O2' G B 46 49.477 167.112 38.996 1.00 59.98 O
ATOM 13 C1' G B 46 49.999 164.908 38.200 1.00 62.95 C
ATOM 14 N9 G B 46 50.178 164.023 39.352 1.00 65.17 N
ATOM 15 C8 G B 46 50.893 164.262 40.505 1.00 65.01 C
ATOM 16 N7 G B 46 50.863 163.262 41.345 1.00 64.17 N
ATOM 17 C5 G B 46 50.085 162.304 40.711 1.00 64.89 C
ATOM 18 C6 G B 46 49.706 161.010 41.132 1.00 64.69 C
ATOM 19 O6 G B 46 49.989 160.433 42.184 1.00 66.95 O
ATOM 20 N1 G B 46 48.915 160.373 40.183 1.00 64.56 N
ATOM 21 C2 G B 46 48.534 160.912 38.982 1.00 64.10 C
ATOM 22 N2 G B 46 47.776 160.136 38.206 1.00 64.25 N
ATOM 23 N3 G B 46 48.874 162.119 38.574 1.00 64.42 N
ATOM 24 C4 G B 46 49.649 162.757 39.483 1.00 65.44 C
ATOM 25 P C B 47 49.252 168.491 35.538 1.00 64.04 P
ATOM 26 OP1 C B 47 48.028 168.416 34.695 1.00 63.97 O
ATOM 27 OP2 C B 47 50.566 168.801 34.914 1.00 61.97 O
ATOM 28 O5' C B 47 48.973 169.543 36.700 1.00 64.31 O
TER
ATOM 2 P A A 60 52.806 161.685 32.684 1.00 55.16 P
ATOM 3 OP1 A A 60 52.094 162.977 32.559 1.00 55.36 O
ATOM 4 OP2 A A 60 53.549 161.390 33.923 1.00 57.10 O
ATOM 5 O5' A A 60 51.729 160.523 32.518 1.00 55.67 O
ATOM 6 C5' A A 60 50.341 160.745 32.827 1.00 58.63 C
ATOM 7 C4' A A 60 49.578 159.437 32.797 1.00 60.69 C
ATOM 8 O4' A A 60 50.108 158.546 33.814 1.00 60.96 O
ATOM 9 C3' A A 60 48.086 159.549 33.084 1.00 62.45 C
ATOM 10 O3' A A 60 47.375 158.532 32.387 1.00 65.42 O
ATOM 11 C2' A A 60 48.011 159.294 34.582 1.00 62.21 C
ATOM 12 O2' A A 60 46.756 158.770 34.958 1.00 63.49 O
ATOM 13 C1' A A 60 49.110 158.252 34.770 1.00 61.38 C
ATOM 14 N9 A A 60 49.742 158.290 36.089 1.00 62.24 N
ATOM 15 C8 A A 60 49.806 157.274 37.005 1.00 62.82 C
ATOM 16 N7 A A 60 50.491 157.574 38.080 1.00 63.32 N
ATOM 17 C5 A A 60 50.893 158.882 37.866 1.00 63.07 C
ATOM 18 C6 A A 60 51.664 159.768 38.632 1.00 63.03 C
ATOM 19 N6 A A 60 52.186 159.455 39.818 1.00 63.32 N
ATOM 20 N1 A A 60 51.886 161.002 38.131 1.00 62.17 N
ATOM 21 C2 A A 60 51.367 161.309 36.941 1.00 62.31 C
ATOM 22 N3 A A 60 50.628 160.562 36.126 1.00 62.97 N
ATOM 23 C4 A A 60 50.426 159.344 36.652 1.00 62.67 C
ATOM 24 P G A 61 46.880 158.794 30.878 1.00 67.38 P
ATOM 25 OP1 G A 61 46.258 160.152 30.790 1.00 65.84 O
ATOM 26 OP2 G A 61 46.105 157.594 30.444 1.00 67.24 O
ATOM 27 O5' G A 61 48.244 158.823 30.067 1.00 64.71 O
TER
ATOM 1 O3' U B 45 55.665 165.835 36.211 1.00 62.80 O
ATOM 2 P G B 46 54.631 166.751 37.031 1.00 62.77 P
ATOM 3 OP1 G B 46 54.264 167.890 36.149 1.00 62.94 O
ATOM 4 OP2 G B 46 55.195 167.024 38.370 1.00 64.88 O
ATOM 5 O5' G B 46 53.356 165.818 37.195 1.00 62.47 O
ATOM 6 C5' G B 46 52.655 165.355 36.040 1.00 62.19 C
ATOM 7 C4' G B 46 51.174 165.460 36.257 1.00 62.71 C
ATOM 8 O4' G B 46 50.741 164.382 37.123 1.00 63.26 O
ATOM 9 C3' G B 46 50.671 166.751 36.893 1.00 63.00 C
ATOM 10 O3' G B 46 49.418 167.090 36.306 1.00 65.10 O
ATOM 11 C2' G B 46 50.474 166.349 38.352 1.00 61.56 C
ATOM 12 O2' G B 46 49.477 167.112 38.996 1.00 59.98 O
ATOM 13 C1' G B 46 49.999 164.908 38.200 1.00 62.95 C
ATOM 14 N9 G B 46 50.178 164.023 39.352 1.00 65.17 N
ATOM 15 C8 G B 46 50.893 164.262 40.505 1.00 65.01 C
ATOM 16 N7 G B 46 50.863 163.262 41.345 1.00 64.17 N
ATOM 17 C5 G B 46 50.085 162.304 40.711 1.00 64.89 C
ATOM 18 C6 G B 46 49.706 161.010 41.132 1.00 64.69 C
ATOM 19 O6 G B 46 49.989 160.433 42.184 1.00 66.95 O
ATOM 20 N1 G B 46 48.915 160.373 40.183 1.00 64.56 N
ATOM 21 C2 G B 46 48.534 160.912 38.982 1.00 64.10 C
ATOM 22 N2 G B 46 47.776 160.136 38.206 1.00 64.25 N
ATOM 23 N3 G B 46 48.874 162.119 38.574 1.00 64.42 N
ATOM 24 C4 G B 46 49.649 162.757 39.483 1.00 65.44 C
ATOM 25 P C B 47 49.252 168.491 35.538 1.00 64.04 P
ATOM 26 OP1 C B 47 48.028 168.416 34.695 1.00 63.97 O
ATOM 27 OP2 C B 47 50.566 168.801 34.914 1.00 61.97 O
ATOM 28 O5' C B 47 48.973 169.543 36.700 1.00 64.31 O
TER
Atoms:
OP1: (52.094,162.977,32.559)
OP2: (53.549,161.390,33.923)
C3': (48.086,159.549,33.084)
C1': (49.110,158.252,34.770)
C5': (50.341,160.745,32.827)
O4': (50.108,158.546,33.814)
C8: (49.806,157.274,37.005)
O2': (46.756,158.770,34.958)
C6: (51.664,159.768,38.632)
C5: (50.893,158.882,37.866)
C4: (50.426,159.344,36.652)
P: (52.806,161.685,32.684)
C4': (49.578,159.437,32.797)
C2': (48.011,159.294,34.582)
C2: (51.367,161.309,36.941)
N1: (51.886,161.002,38.131)
N3: (50.628,160.562,36.126)
N6: (52.186,159.455,39.818)
N7: (50.491,157.574,38.080)
N9: (49.742,158.290,36.089)
O5': (51.729,160.523,32.518)
O3': (47.375,158.532,32.387)
OP2: (53.549,161.390,33.923)
C3': (48.086,159.549,33.084)
C1': (49.110,158.252,34.770)
C5': (50.341,160.745,32.827)
O4': (50.108,158.546,33.814)
C8: (49.806,157.274,37.005)
O2': (46.756,158.770,34.958)
C6: (51.664,159.768,38.632)
C5: (50.893,158.882,37.866)
C4: (50.426,159.344,36.652)
P: (52.806,161.685,32.684)
C4': (49.578,159.437,32.797)
C2': (48.011,159.294,34.582)
C2: (51.367,161.309,36.941)
N1: (51.886,161.002,38.131)
N3: (50.628,160.562,36.126)
N6: (52.186,159.455,39.818)
N7: (50.491,157.574,38.080)
N9: (49.742,158.290,36.089)
O5': (51.729,160.523,32.518)
O3': (47.375,158.532,32.387)
OP1: (54.264,167.890,36.149)
OP2: (55.195,167.024,38.370)
C3': (50.671,166.751,36.893)
C1': (49.999,164.908,38.200)
C5': (52.655,165.355,36.040)
O6: (49.989,160.433,42.184)
O4': (50.741,164.382,37.123)
C8: (50.893,164.262,40.505)
C2: (48.534,160.912,38.982)
C6: (49.706,161.010,41.132)
C5: (50.085,162.304,40.711)
C4: (49.649,162.757,39.483)
P: (54.631,166.751,37.031)
C4': (51.174,165.460,36.257)
C2': (50.474,166.349,38.352)
O2': (49.477,167.112,38.996)
N1: (48.915,160.373,40.183)
N2: (47.776,160.136,38.206)
N3: (48.874,162.119,38.574)
N7: (50.863,163.262,41.345)
N9: (50.178,164.023,39.352)
O5': (53.356,165.818,37.195)
O3': (49.418,167.090,36.306)
OP2: (55.195,167.024,38.370)
C3': (50.671,166.751,36.893)
C1': (49.999,164.908,38.200)
C5': (52.655,165.355,36.040)
O6: (49.989,160.433,42.184)
O4': (50.741,164.382,37.123)
C8: (50.893,164.262,40.505)
C2: (48.534,160.912,38.982)
C6: (49.706,161.010,41.132)
C5: (50.085,162.304,40.711)
C4: (49.649,162.757,39.483)
P: (54.631,166.751,37.031)
C4': (51.174,165.460,36.257)
C2': (50.474,166.349,38.352)
O2': (49.477,167.112,38.996)
N1: (48.915,160.373,40.183)
N2: (47.776,160.136,38.206)
N3: (48.874,162.119,38.574)
N7: (50.863,163.262,41.345)
N9: (50.178,164.023,39.352)
O5': (53.356,165.818,37.195)
O3': (49.418,167.090,36.306)
Image (generated by PyMOL):