ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCJ:0554:01053

Extra

PDB:
ATOM 1 O3' A A 553 -0.686 91.198 98.140 1.00 70.82 O
ATOM 2 P A A 554 -0.855 90.702 99.667 1.00 71.45 P
ATOM 3 OP1 A A 554 -1.134 89.237 99.601 1.00 70.60 O
ATOM 4 OP2 A A 554 -1.803 91.603 100.384 1.00 69.47 O
ATOM 5 O5' A A 554 0.587 90.923 100.306 1.00 67.98 O
ATOM 6 C5' A A 554 1.753 90.312 99.729 1.00 63.08 C
ATOM 7 C4' A A 554 2.974 91.122 100.064 1.00 59.14 C
ATOM 8 O4' A A 554 2.861 92.429 99.462 1.00 57.57 O
ATOM 9 C3' A A 554 3.124 91.424 101.532 1.00 58.64 C
ATOM 10 O3' A A 554 3.721 90.336 102.187 1.00 61.88 O
ATOM 11 C2' A A 554 3.996 92.658 101.509 1.00 57.74 C
ATOM 12 O2' A A 554 5.322 92.320 101.165 1.00 57.79 O
ATOM 13 C1' A A 554 3.380 93.409 100.337 1.00 56.58 C
ATOM 14 N9 A A 554 2.269 94.273 100.716 1.00 55.81 N
ATOM 15 C8 A A 554 0.947 93.931 100.738 1.00 55.82 C
ATOM 16 N7 A A 554 0.152 94.912 101.080 1.00 56.39 N
ATOM 17 C5 A A 554 1.013 95.974 101.309 1.00 56.30 C
ATOM 18 C6 A A 554 0.788 97.313 101.703 1.00 56.33 C
ATOM 19 N6 A A 554 -0.423 97.825 101.951 1.00 54.82 N
ATOM 20 N1 A A 554 1.865 98.114 101.838 1.00 55.40 N
ATOM 21 C2 A A 554 3.077 97.598 101.601 1.00 56.27 C
ATOM 22 N3 A A 554 3.414 96.360 101.231 1.00 56.70 N
ATOM 23 C4 A A 554 2.323 95.591 101.097 1.00 56.19 C
ATOM 24 P U A 555 2.982 89.697 103.446 1.00 64.22 P
ATOM 25 OP1 U A 555 3.644 88.415 103.786 1.00 62.88 O
ATOM 26 OP2 U A 555 1.543 89.706 103.109 1.00 66.69 O
ATOM 27 O5' U A 555 3.204 90.770 104.601 1.00 62.11 O
TER

ATOM 1 O3' G B1052 3.920 102.677 102.611 1.00 59.24 O
ATOM 2 P G B1053 4.723 102.588 104.001 1.00 62.50 P
ATOM 3 OP1 G B1053 3.728 102.876 105.076 1.00 62.07 O
ATOM 4 OP2 G B1053 5.937 103.443 103.879 1.00 61.86 O
ATOM 5 O5' G B1053 5.179 101.053 104.104 1.00 58.82 O
ATOM 6 C5' G B1053 4.230 100.029 104.468 1.00 54.33 C
ATOM 7 C4' G B1053 4.873 98.654 104.516 1.00 50.93 C
ATOM 8 O4' G B1053 5.525 98.363 103.265 1.00 48.62 O
ATOM 9 C3' G B1053 5.969 98.352 105.526 1.00 50.09 C
ATOM 10 O3' G B1053 5.435 98.105 106.827 1.00 52.72 O
ATOM 11 C2' G B1053 6.515 97.050 104.963 1.00 48.91 C
ATOM 12 O2' G B1053 5.648 95.975 105.221 1.00 48.82 O
ATOM 13 C1' G B1053 6.451 97.315 103.464 1.00 48.71 C
ATOM 14 N9 G B1053 7.738 97.719 102.922 1.00 49.63 N
ATOM 15 C8 G B1053 8.077 98.963 102.466 1.00 50.98 C
ATOM 16 N7 G B1053 9.297 99.023 102.009 1.00 51.74 N
ATOM 17 C5 G B1053 9.794 97.739 102.177 1.00 49.55 C
ATOM 18 C6 G B1053 11.056 97.201 101.853 1.00 49.05 C
ATOM 19 O6 G B1053 12.019 97.764 101.312 1.00 50.26 O
ATOM 20 N1 G B1053 11.146 95.865 102.215 1.00 46.51 N
ATOM 21 C2 G B1053 10.153 95.146 102.803 1.00 45.26 C
ATOM 22 N2 G B1053 10.445 93.888 103.099 1.00 43.90 N
ATOM 23 N3 G B1053 8.963 95.627 103.088 1.00 46.74 N
ATOM 24 C4 G B1053 8.853 96.925 102.753 1.00 48.77 C
ATOM 25 P U B1054 6.411 97.998 108.105 1.00 52.33 P
ATOM 26 OP1 U B1054 5.534 97.652 109.235 1.00 52.63 O
ATOM 27 OP2 U B1054 7.252 99.202 108.199 1.00 56.04 O
ATOM 28 O5' U B1054 7.367 96.765 107.786 1.00 52.57 O
TER

Atoms:
OP1: (-1.134,89.237,99.601)
OP2: (-1.803,91.603,100.384)
C3': (3.124,91.424,101.532)
C1': (3.380,93.409,100.337)
C5': (1.753,90.312,99.729)
O4': (2.861,92.429,99.462)
C8: (0.947,93.931,100.738)
O2': (5.322,92.320,101.165)
C6: (0.788,97.313,101.703)
C5: (1.013,95.974,101.309)
C4: (2.323,95.591,101.097)
P: (-0.855,90.702,99.667)
C4': (2.974,91.122,100.064)
C2': (3.996,92.658,101.509)
C2: (3.077,97.598,101.601)
N1: (1.865,98.114,101.838)
N3: (3.414,96.360,101.231)
N6: (-0.423,97.825,101.951)
N7: (0.152,94.912,101.080)
N9: (2.269,94.273,100.716)
O5': (0.587,90.923,100.306)
O3': (3.721,90.336,102.187)
OP1: (3.728,102.876,105.076)
OP2: (5.937,103.443,103.879)
C3': (5.969,98.352,105.526)
C1': (6.451,97.315,103.464)
C5': (4.230,100.029,104.468)
O6: (12.019,97.764,101.312)
O4': (5.525,98.363,103.265)
C8: (8.077,98.963,102.466)
C2: (10.153,95.146,102.803)
C6: (11.056,97.201,101.853)
C5: (9.794,97.739,102.177)
C4: (8.853,96.925,102.753)
P: (4.723,102.588,104.001)
C4': (4.873,98.654,104.516)
C2': (6.515,97.050,104.963)
O2': (5.648,95.975,105.221)
N1: (11.146,95.865,102.215)
N2: (10.445,93.888,103.099)
N3: (8.963,95.627,103.088)
N7: (9.297,99.023,102.009)
N9: (7.738,97.719,102.922)
O5': (5.179,101.053,104.104)
O3': (5.435,98.105,106.827)
Image (generated by PyMOL):
PyMOL image
show in jmol