Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02744:02673
Extra
PDB:
ATOM 1 O3' U A2743 40.230 192.101 113.908 1.00 61.28 O
ATOM 2 P A A2744 38.846 191.292 113.956 1.00 61.61 P
ATOM 3 OP1 A A2744 38.117 191.530 112.681 1.00 61.53 O
ATOM 4 OP2 A A2744 38.179 191.582 115.251 1.00 61.45 O
ATOM 5 O5' A A2744 39.309 189.772 114.001 1.00 61.54 O
ATOM 6 C5' A A2744 39.879 189.137 112.847 1.00 60.18 C
ATOM 7 C4' A A2744 40.082 187.671 113.117 1.00 59.29 C
ATOM 8 O4' A A2744 41.102 187.509 114.141 1.00 60.00 O
ATOM 9 C3' A A2744 38.887 186.947 113.711 1.00 58.53 C
ATOM 10 O3' A A2744 37.885 186.611 112.763 1.00 56.94 O
ATOM 11 C2' A A2744 39.547 185.731 114.342 1.00 57.86 C
ATOM 12 O2' A A2744 39.933 184.757 113.390 1.00 57.20 O
ATOM 13 C1' A A2744 40.800 186.368 114.937 1.00 59.12 C
ATOM 14 N9 A A2744 40.587 186.798 116.321 1.00 59.35 N
ATOM 15 C8 A A2744 40.312 188.056 116.798 1.00 58.67 C
ATOM 16 N7 A A2744 40.152 188.105 118.099 1.00 59.60 N
ATOM 17 C5 A A2744 40.338 186.792 118.508 1.00 59.49 C
ATOM 18 C6 A A2744 40.299 186.176 119.774 1.00 59.31 C
ATOM 19 N6 A A2744 40.036 186.826 120.908 1.00 58.35 N
ATOM 20 N1 A A2744 40.540 184.849 119.834 1.00 59.41 N
ATOM 21 C2 A A2744 40.795 184.192 118.699 1.00 59.72 C
ATOM 22 N3 A A2744 40.853 184.654 117.452 1.00 60.21 N
ATOM 23 C4 A A2744 40.613 185.977 117.425 1.00 59.98 C
ATOM 24 P A A2745 36.406 186.254 113.280 1.00 56.54 P
ATOM 25 OP1 A A2745 35.765 185.316 112.315 1.00 56.28 O
ATOM 26 OP2 A A2745 35.738 187.534 113.613 1.00 57.91 O
ATOM 27 O5' A A2745 36.672 185.473 114.644 1.00 55.77 O
TER
ATOM 1 O3' C B2672 38.046 179.855 111.922 1.00 55.35 O
ATOM 2 P G B2673 39.576 179.411 112.130 1.00 56.03 P
ATOM 3 OP1 G B2673 40.424 180.375 111.378 1.00 56.88 O
ATOM 4 OP2 G B2673 39.709 177.949 111.854 1.00 55.18 O
ATOM 5 O5' G B2673 39.809 179.644 113.688 1.00 54.24 O
ATOM 6 C5' G B2673 39.890 180.971 114.234 1.00 51.92 C
ATOM 7 C4' G B2673 40.332 180.907 115.670 1.00 50.60 C
ATOM 8 O4' G B2673 39.273 180.352 116.493 1.00 51.38 O
ATOM 9 C3' G B2673 41.507 179.985 115.918 1.00 50.41 C
ATOM 10 O3' G B2673 42.747 180.608 115.594 1.00 52.30 O
ATOM 11 C2' G B2673 41.357 179.665 117.398 1.00 50.10 C
ATOM 12 O2' G B2673 41.826 180.717 118.214 1.00 50.43 O
ATOM 13 C1' G B2673 39.836 179.555 117.528 1.00 50.09 C
ATOM 14 N9 G B2673 39.329 178.189 117.390 1.00 50.38 N
ATOM 15 C8 G B2673 38.769 177.628 116.266 1.00 52.25 C
ATOM 16 N7 G B2673 38.394 176.389 116.441 1.00 51.76 N
ATOM 17 C5 G B2673 38.729 176.110 117.757 1.00 50.17 C
ATOM 18 C6 G B2673 38.559 174.921 118.513 1.00 49.64 C
ATOM 19 O6 G B2673 38.067 173.845 118.155 1.00 48.01 O
ATOM 20 N1 G B2673 39.032 175.070 119.812 1.00 48.86 N
ATOM 21 C2 G B2673 39.597 176.213 120.320 1.00 49.77 C
ATOM 22 N2 G B2673 39.985 176.163 121.601 1.00 49.37 N
ATOM 23 N3 G B2673 39.766 177.327 119.623 1.00 50.87 N
ATOM 24 C4 G B2673 39.311 177.207 118.359 1.00 50.13 C
ATOM 25 P C B2674 44.091 179.725 115.555 1.00 51.78 P
ATOM 26 OP1 C B2674 45.262 180.637 115.569 1.00 50.39 O
ATOM 27 OP2 C B2674 43.972 178.698 114.485 1.00 52.17 O
ATOM 28 O5' C B2674 44.039 178.988 116.957 1.00 50.55 O
TER
ATOM 2 P A A2744 38.846 191.292 113.956 1.00 61.61 P
ATOM 3 OP1 A A2744 38.117 191.530 112.681 1.00 61.53 O
ATOM 4 OP2 A A2744 38.179 191.582 115.251 1.00 61.45 O
ATOM 5 O5' A A2744 39.309 189.772 114.001 1.00 61.54 O
ATOM 6 C5' A A2744 39.879 189.137 112.847 1.00 60.18 C
ATOM 7 C4' A A2744 40.082 187.671 113.117 1.00 59.29 C
ATOM 8 O4' A A2744 41.102 187.509 114.141 1.00 60.00 O
ATOM 9 C3' A A2744 38.887 186.947 113.711 1.00 58.53 C
ATOM 10 O3' A A2744 37.885 186.611 112.763 1.00 56.94 O
ATOM 11 C2' A A2744 39.547 185.731 114.342 1.00 57.86 C
ATOM 12 O2' A A2744 39.933 184.757 113.390 1.00 57.20 O
ATOM 13 C1' A A2744 40.800 186.368 114.937 1.00 59.12 C
ATOM 14 N9 A A2744 40.587 186.798 116.321 1.00 59.35 N
ATOM 15 C8 A A2744 40.312 188.056 116.798 1.00 58.67 C
ATOM 16 N7 A A2744 40.152 188.105 118.099 1.00 59.60 N
ATOM 17 C5 A A2744 40.338 186.792 118.508 1.00 59.49 C
ATOM 18 C6 A A2744 40.299 186.176 119.774 1.00 59.31 C
ATOM 19 N6 A A2744 40.036 186.826 120.908 1.00 58.35 N
ATOM 20 N1 A A2744 40.540 184.849 119.834 1.00 59.41 N
ATOM 21 C2 A A2744 40.795 184.192 118.699 1.00 59.72 C
ATOM 22 N3 A A2744 40.853 184.654 117.452 1.00 60.21 N
ATOM 23 C4 A A2744 40.613 185.977 117.425 1.00 59.98 C
ATOM 24 P A A2745 36.406 186.254 113.280 1.00 56.54 P
ATOM 25 OP1 A A2745 35.765 185.316 112.315 1.00 56.28 O
ATOM 26 OP2 A A2745 35.738 187.534 113.613 1.00 57.91 O
ATOM 27 O5' A A2745 36.672 185.473 114.644 1.00 55.77 O
TER
ATOM 1 O3' C B2672 38.046 179.855 111.922 1.00 55.35 O
ATOM 2 P G B2673 39.576 179.411 112.130 1.00 56.03 P
ATOM 3 OP1 G B2673 40.424 180.375 111.378 1.00 56.88 O
ATOM 4 OP2 G B2673 39.709 177.949 111.854 1.00 55.18 O
ATOM 5 O5' G B2673 39.809 179.644 113.688 1.00 54.24 O
ATOM 6 C5' G B2673 39.890 180.971 114.234 1.00 51.92 C
ATOM 7 C4' G B2673 40.332 180.907 115.670 1.00 50.60 C
ATOM 8 O4' G B2673 39.273 180.352 116.493 1.00 51.38 O
ATOM 9 C3' G B2673 41.507 179.985 115.918 1.00 50.41 C
ATOM 10 O3' G B2673 42.747 180.608 115.594 1.00 52.30 O
ATOM 11 C2' G B2673 41.357 179.665 117.398 1.00 50.10 C
ATOM 12 O2' G B2673 41.826 180.717 118.214 1.00 50.43 O
ATOM 13 C1' G B2673 39.836 179.555 117.528 1.00 50.09 C
ATOM 14 N9 G B2673 39.329 178.189 117.390 1.00 50.38 N
ATOM 15 C8 G B2673 38.769 177.628 116.266 1.00 52.25 C
ATOM 16 N7 G B2673 38.394 176.389 116.441 1.00 51.76 N
ATOM 17 C5 G B2673 38.729 176.110 117.757 1.00 50.17 C
ATOM 18 C6 G B2673 38.559 174.921 118.513 1.00 49.64 C
ATOM 19 O6 G B2673 38.067 173.845 118.155 1.00 48.01 O
ATOM 20 N1 G B2673 39.032 175.070 119.812 1.00 48.86 N
ATOM 21 C2 G B2673 39.597 176.213 120.320 1.00 49.77 C
ATOM 22 N2 G B2673 39.985 176.163 121.601 1.00 49.37 N
ATOM 23 N3 G B2673 39.766 177.327 119.623 1.00 50.87 N
ATOM 24 C4 G B2673 39.311 177.207 118.359 1.00 50.13 C
ATOM 25 P C B2674 44.091 179.725 115.555 1.00 51.78 P
ATOM 26 OP1 C B2674 45.262 180.637 115.569 1.00 50.39 O
ATOM 27 OP2 C B2674 43.972 178.698 114.485 1.00 52.17 O
ATOM 28 O5' C B2674 44.039 178.988 116.957 1.00 50.55 O
TER
Atoms:
OP1: (38.117,191.530,112.681)
OP2: (38.179,191.582,115.251)
C3': (38.887,186.947,113.711)
C1': (40.800,186.368,114.937)
C5': (39.879,189.137,112.847)
O4': (41.102,187.509,114.141)
C8: (40.312,188.056,116.798)
O2': (39.933,184.757,113.390)
C6: (40.299,186.176,119.774)
C5: (40.338,186.792,118.508)
C4: (40.613,185.977,117.425)
P: (38.846,191.292,113.956)
C4': (40.082,187.671,113.117)
C2': (39.547,185.731,114.342)
C2: (40.795,184.192,118.699)
N1: (40.540,184.849,119.834)
N3: (40.853,184.654,117.452)
N6: (40.036,186.826,120.908)
N7: (40.152,188.105,118.099)
N9: (40.587,186.798,116.321)
O5': (39.309,189.772,114.001)
O3': (37.885,186.611,112.763)
OP2: (38.179,191.582,115.251)
C3': (38.887,186.947,113.711)
C1': (40.800,186.368,114.937)
C5': (39.879,189.137,112.847)
O4': (41.102,187.509,114.141)
C8: (40.312,188.056,116.798)
O2': (39.933,184.757,113.390)
C6: (40.299,186.176,119.774)
C5: (40.338,186.792,118.508)
C4: (40.613,185.977,117.425)
P: (38.846,191.292,113.956)
C4': (40.082,187.671,113.117)
C2': (39.547,185.731,114.342)
C2: (40.795,184.192,118.699)
N1: (40.540,184.849,119.834)
N3: (40.853,184.654,117.452)
N6: (40.036,186.826,120.908)
N7: (40.152,188.105,118.099)
N9: (40.587,186.798,116.321)
O5': (39.309,189.772,114.001)
O3': (37.885,186.611,112.763)
OP1: (40.424,180.375,111.378)
OP2: (39.709,177.949,111.854)
C3': (41.507,179.985,115.918)
C1': (39.836,179.555,117.528)
C5': (39.890,180.971,114.234)
O6: (38.067,173.845,118.155)
O4': (39.273,180.352,116.493)
C8: (38.769,177.628,116.266)
C2: (39.597,176.213,120.320)
C6: (38.559,174.921,118.513)
C5: (38.729,176.110,117.757)
C4: (39.311,177.207,118.359)
P: (39.576,179.411,112.130)
C4': (40.332,180.907,115.670)
C2': (41.357,179.665,117.398)
O2': (41.826,180.717,118.214)
N1: (39.032,175.070,119.812)
N2: (39.985,176.163,121.601)
N3: (39.766,177.327,119.623)
N7: (38.394,176.389,116.441)
N9: (39.329,178.189,117.390)
O5': (39.809,179.644,113.688)
O3': (42.747,180.608,115.594)
OP2: (39.709,177.949,111.854)
C3': (41.507,179.985,115.918)
C1': (39.836,179.555,117.528)
C5': (39.890,180.971,114.234)
O6: (38.067,173.845,118.155)
O4': (39.273,180.352,116.493)
C8: (38.769,177.628,116.266)
C2: (39.597,176.213,120.320)
C6: (38.559,174.921,118.513)
C5: (38.729,176.110,117.757)
C4: (39.311,177.207,118.359)
P: (39.576,179.411,112.130)
C4': (40.332,180.907,115.670)
C2': (41.357,179.665,117.398)
O2': (41.826,180.717,118.214)
N1: (39.032,175.070,119.812)
N2: (39.985,176.163,121.601)
N3: (39.766,177.327,119.623)
N7: (38.394,176.389,116.441)
N9: (39.329,178.189,117.390)
O5': (39.809,179.644,113.688)
O3': (42.747,180.608,115.594)
Image (generated by PyMOL):