ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:038:0137

Extra

PDB:
ATOM 1 O3' G A 37 69.136 146.941 28.852 1.00 48.26 O
ATOM 2 P A A 38 67.748 147.502 29.415 1.00 48.79 P
ATOM 3 OP1 A A 38 67.137 148.329 28.347 1.00 48.23 O
ATOM 4 OP2 A A 38 67.988 148.104 30.743 1.00 49.02 O
ATOM 5 O5' A A 38 66.878 146.180 29.597 1.00 48.06 O
ATOM 6 C5' A A 38 66.374 145.463 28.453 1.00 48.04 C
ATOM 7 C4' A A 38 66.201 143.999 28.785 1.00 47.86 C
ATOM 8 O4' A A 38 67.496 143.368 28.890 1.00 48.20 O
ATOM 9 C3' A A 38 65.515 143.711 30.108 1.00 47.23 C
ATOM 10 O3' A A 38 64.107 143.708 29.957 1.00 45.93 O
ATOM 11 C2' A A 38 66.039 142.331 30.466 1.00 48.49 C
ATOM 12 O2' A A 38 65.332 141.299 29.813 1.00 50.00 O
ATOM 13 C1' A A 38 67.466 142.398 29.916 1.00 48.71 C
ATOM 14 N9 A A 38 68.486 142.755 30.896 1.00 49.10 N
ATOM 15 C8 A A 38 69.123 143.959 31.053 1.00 48.73 C
ATOM 16 N7 A A 38 70.058 143.943 31.967 1.00 50.29 N
ATOM 17 C5 A A 38 70.023 142.646 32.458 1.00 50.48 C
ATOM 18 C6 A A 38 70.788 141.978 33.426 1.00 50.67 C
ATOM 19 N6 A A 38 71.803 142.537 34.085 1.00 51.65 N
ATOM 20 N1 A A 38 70.484 140.691 33.687 1.00 50.66 N
ATOM 21 C2 A A 38 69.493 140.118 33.008 1.00 51.46 C
ATOM 22 N3 A A 38 68.715 140.631 32.062 1.00 51.97 N
ATOM 23 C4 A A 38 69.039 141.914 31.828 1.00 50.51 C
ATOM 24 P A A 39 63.193 144.372 31.086 1.00 46.03 P
ATOM 25 OP1 A A 39 61.789 144.326 30.609 1.00 43.87 O
ATOM 26 OP2 A A 39 63.810 145.676 31.443 1.00 46.43 O
ATOM 27 O5' A A 39 63.358 143.395 32.329 1.00 45.41 O
TER

ATOM 1 O3' A B 136 72.911 137.068 36.599 1.00 37.36 O
ATOM 2 P G B 137 71.972 135.885 37.138 1.00 36.29 P
ATOM 3 OP1 G B 137 71.878 136.034 38.609 1.00 37.11 O
ATOM 4 OP2 G B 137 72.433 134.598 36.562 1.00 34.49 O
ATOM 5 O5' G B 137 70.559 136.234 36.507 1.00 34.57 O
ATOM 6 C5' G B 137 69.876 137.431 36.874 1.00 35.70 C
ATOM 7 C4' G B 137 68.551 137.500 36.167 1.00 38.19 C
ATOM 8 O4' G B 137 68.785 137.378 34.742 1.00 39.60 O
ATOM 9 C3' G B 137 67.583 136.365 36.440 1.00 38.32 C
ATOM 10 O3' G B 137 66.861 136.556 37.640 1.00 40.74 O
ATOM 11 C2' G B 137 66.662 136.448 35.239 1.00 38.42 C
ATOM 12 O2' G B 137 65.749 137.514 35.361 1.00 39.43 O
ATOM 13 C1' G B 137 67.657 136.777 34.129 1.00 38.92 C
ATOM 14 N9 G B 137 68.092 135.601 33.388 1.00 38.79 N
ATOM 15 C8 G B 137 69.299 134.942 33.473 1.00 39.97 C
ATOM 16 N7 G B 137 69.385 133.922 32.661 1.00 40.55 N
ATOM 17 C5 G B 137 68.159 133.904 32.004 1.00 40.87 C
ATOM 18 C6 G B 137 67.654 133.021 31.001 1.00 40.40 C
ATOM 19 O6 G B 137 68.207 132.040 30.484 1.00 39.27 O
ATOM 20 N1 G B 137 66.363 133.376 30.612 1.00 40.63 N
ATOM 21 C2 G B 137 65.643 134.437 31.121 1.00 40.18 C
ATOM 22 N2 G B 137 64.418 134.630 30.607 1.00 37.50 N
ATOM 23 N3 G B 137 66.096 135.253 32.061 1.00 39.45 N
ATOM 24 C4 G B 137 67.351 134.934 32.448 1.00 39.88 C
ATOM 25 P G B 138 66.375 135.278 38.472 1.00 44.83 P
ATOM 26 OP1 G B 138 65.715 135.745 39.718 1.00 42.21 O
ATOM 27 OP2 G B 138 67.529 134.339 38.551 1.00 43.51 O
ATOM 28 O5' G B 138 65.276 134.612 37.535 1.00 42.66 O
TER

Atoms:
OP1: (67.137,148.329,28.347)
OP2: (67.988,148.104,30.743)
C3': (65.515,143.711,30.108)
C1': (67.466,142.398,29.916)
C5': (66.374,145.463,28.453)
O4': (67.496,143.368,28.890)
C8: (69.123,143.959,31.053)
O2': (65.332,141.299,29.813)
C6: (70.788,141.978,33.426)
C5: (70.023,142.646,32.458)
C4: (69.039,141.914,31.828)
P: (67.748,147.502,29.415)
C4': (66.201,143.999,28.785)
C2': (66.039,142.331,30.466)
C2: (69.493,140.118,33.008)
N1: (70.484,140.691,33.687)
N3: (68.715,140.631,32.062)
N6: (71.803,142.537,34.085)
N7: (70.058,143.943,31.967)
N9: (68.486,142.755,30.896)
O5': (66.878,146.180,29.597)
O3': (64.107,143.708,29.957)
OP1: (71.878,136.034,38.609)
OP2: (72.433,134.598,36.562)
C3': (67.583,136.365,36.440)
C1': (67.657,136.777,34.129)
C5': (69.876,137.431,36.874)
O6: (68.207,132.040,30.484)
O4': (68.785,137.378,34.742)
C8: (69.299,134.942,33.473)
C2: (65.643,134.437,31.121)
C6: (67.654,133.021,31.001)
C5: (68.159,133.904,32.004)
C4: (67.351,134.934,32.448)
P: (71.972,135.885,37.138)
C4': (68.551,137.500,36.167)
C2': (66.662,136.448,35.239)
O2': (65.749,137.514,35.361)
N1: (66.363,133.376,30.612)
N2: (64.418,134.630,30.607)
N3: (66.096,135.253,32.061)
N7: (69.385,133.922,32.661)
N9: (68.092,135.601,33.388)
O5': (70.559,136.234,36.507)
O3': (66.861,136.556,37.640)
Image (generated by PyMOL):
PyMOL image
show in jmol