Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:B49:B25
Extra
PDB:
ATOM 1 O3' U A 48 4.226 0.826 -20.894 1.00 53.63 O
ATOM 2 P A A 49 5.316 1.215 -19.790 1.00 31.66 P
ATOM 3 OP1 A A 49 4.957 2.567 -19.298 1.00 38.86 O
ATOM 4 OP2 A A 49 6.654 1.016 -20.406 1.00 37.44 O
ATOM 5 O5' A A 49 5.081 0.117 -18.639 1.00 40.08 O
ATOM 6 C5' A A 49 3.797 -0.097 -18.056 1.00 36.15 C
ATOM 7 C4' A A 49 3.892 -0.472 -16.590 1.00 42.08 C
ATOM 8 O4' A A 49 4.379 -1.838 -16.455 1.00 36.95 O
ATOM 9 C3' A A 49 4.824 0.393 -15.752 1.00 50.93 C
ATOM 10 O3' A A 49 4.330 0.459 -14.433 1.00 58.25 O
ATOM 11 C2' A A 49 6.106 -0.413 -15.732 1.00 50.80 C
ATOM 12 O2' A A 49 6.938 -0.135 -14.624 1.00 47.33 O
ATOM 13 C1' A A 49 5.570 -1.845 -15.694 1.00 44.27 C
ATOM 14 N9 A A 49 6.487 -2.818 -16.286 1.00 47.71 N
ATOM 15 C8 A A 49 7.060 -2.757 -17.527 1.00 43.00 C
ATOM 16 N7 A A 49 7.878 -3.751 -17.780 1.00 46.13 N
ATOM 17 C5 A A 49 7.860 -4.514 -16.632 1.00 51.31 C
ATOM 18 C6 A A 49 8.519 -5.698 -16.262 1.00 51.91 C
ATOM 19 N6 A A 49 9.356 -6.374 -17.036 1.00 41.51 N
ATOM 20 N1 A A 49 8.283 -6.187 -15.021 1.00 61.11 N
ATOM 21 C2 A A 49 7.434 -5.523 -14.220 1.00 58.20 C
ATOM 22 N3 A A 49 6.756 -4.397 -14.456 1.00 56.08 N
ATOM 23 C4 A A 49 7.013 -3.939 -15.694 1.00 54.74 C
ATOM 24 P U A 50 3.908 1.853 -13.783 1.00 63.92 P
ATOM 25 OP1 U A 50 3.011 2.546 -14.745 1.00 59.78 O
ATOM 26 OP2 U A 50 5.147 2.533 -13.345 1.00 60.61 O
ATOM 27 O5' U A 50 3.081 1.364 -12.535 1.00 66.13 O
TER
ATOM 1 O3' G B 24 4.733 -4.185 -10.778 1.00 46.35 O
ATOM 2 P G B 25 4.649 -4.055 -9.177 1.00 46.15 P
ATOM 3 OP1 G B 25 3.465 -4.831 -8.723 1.00 50.46 O
ATOM 4 OP2 G B 25 4.714 -2.607 -8.863 1.00 39.37 O
ATOM 5 O5' G B 25 5.984 -4.775 -8.683 1.00 54.44 O
ATOM 6 C5' G B 25 6.136 -6.189 -8.758 1.00 44.92 C
ATOM 7 C4' G B 25 7.540 -6.575 -9.183 1.00 40.92 C
ATOM 8 O4' G B 25 7.759 -6.191 -10.570 1.00 32.10 O
ATOM 9 C3' G B 25 8.685 -5.893 -8.432 1.00 36.96 C
ATOM 10 O3' G B 25 8.977 -6.477 -7.177 1.00 33.76 O
ATOM 11 C2' G B 25 9.821 -5.984 -9.430 1.00 38.30 C
ATOM 12 O2' G B 25 10.324 -7.316 -9.492 1.00 31.40 O
ATOM 13 C1' G B 25 9.067 -5.692 -10.725 1.00 41.42 C
ATOM 14 N9 G B 25 8.971 -4.243 -11.003 1.00 41.87 N
ATOM 15 C8 G B 25 7.822 -3.493 -10.988 1.00 31.08 C
ATOM 16 N7 G B 25 8.026 -2.239 -11.284 1.00 30.42 N
ATOM 17 C5 G B 25 9.387 -2.157 -11.532 1.00 36.97 C
ATOM 18 C6 G B 25 10.176 -1.036 -11.901 1.00 44.27 C
ATOM 19 O6 G B 25 9.797 0.136 -12.101 1.00 42.22 O
ATOM 20 N1 G B 25 11.527 -1.405 -12.016 1.00 45.70 N
ATOM 21 C2 G B 25 12.051 -2.675 -11.815 1.00 37.08 C
ATOM 22 N2 G B 25 13.378 -2.826 -11.986 1.00 24.57 N
ATOM 23 N3 G B 25 11.318 -3.728 -11.485 1.00 22.66 N
ATOM 24 C4 G B 25 10.001 -3.390 -11.360 1.00 43.80 C
ATOM 25 P C B 26 9.265 -5.531 -5.917 1.00 50.32 P
ATOM 26 OP1 C B 26 9.148 -6.379 -4.707 1.00 49.86 O
ATOM 27 OP2 C B 26 8.380 -4.352 -6.043 1.00 51.16 O
ATOM 28 O5' C B 26 10.787 -5.089 -6.141 1.00 38.28 O
TER
ATOM 2 P A A 49 5.316 1.215 -19.790 1.00 31.66 P
ATOM 3 OP1 A A 49 4.957 2.567 -19.298 1.00 38.86 O
ATOM 4 OP2 A A 49 6.654 1.016 -20.406 1.00 37.44 O
ATOM 5 O5' A A 49 5.081 0.117 -18.639 1.00 40.08 O
ATOM 6 C5' A A 49 3.797 -0.097 -18.056 1.00 36.15 C
ATOM 7 C4' A A 49 3.892 -0.472 -16.590 1.00 42.08 C
ATOM 8 O4' A A 49 4.379 -1.838 -16.455 1.00 36.95 O
ATOM 9 C3' A A 49 4.824 0.393 -15.752 1.00 50.93 C
ATOM 10 O3' A A 49 4.330 0.459 -14.433 1.00 58.25 O
ATOM 11 C2' A A 49 6.106 -0.413 -15.732 1.00 50.80 C
ATOM 12 O2' A A 49 6.938 -0.135 -14.624 1.00 47.33 O
ATOM 13 C1' A A 49 5.570 -1.845 -15.694 1.00 44.27 C
ATOM 14 N9 A A 49 6.487 -2.818 -16.286 1.00 47.71 N
ATOM 15 C8 A A 49 7.060 -2.757 -17.527 1.00 43.00 C
ATOM 16 N7 A A 49 7.878 -3.751 -17.780 1.00 46.13 N
ATOM 17 C5 A A 49 7.860 -4.514 -16.632 1.00 51.31 C
ATOM 18 C6 A A 49 8.519 -5.698 -16.262 1.00 51.91 C
ATOM 19 N6 A A 49 9.356 -6.374 -17.036 1.00 41.51 N
ATOM 20 N1 A A 49 8.283 -6.187 -15.021 1.00 61.11 N
ATOM 21 C2 A A 49 7.434 -5.523 -14.220 1.00 58.20 C
ATOM 22 N3 A A 49 6.756 -4.397 -14.456 1.00 56.08 N
ATOM 23 C4 A A 49 7.013 -3.939 -15.694 1.00 54.74 C
ATOM 24 P U A 50 3.908 1.853 -13.783 1.00 63.92 P
ATOM 25 OP1 U A 50 3.011 2.546 -14.745 1.00 59.78 O
ATOM 26 OP2 U A 50 5.147 2.533 -13.345 1.00 60.61 O
ATOM 27 O5' U A 50 3.081 1.364 -12.535 1.00 66.13 O
TER
ATOM 1 O3' G B 24 4.733 -4.185 -10.778 1.00 46.35 O
ATOM 2 P G B 25 4.649 -4.055 -9.177 1.00 46.15 P
ATOM 3 OP1 G B 25 3.465 -4.831 -8.723 1.00 50.46 O
ATOM 4 OP2 G B 25 4.714 -2.607 -8.863 1.00 39.37 O
ATOM 5 O5' G B 25 5.984 -4.775 -8.683 1.00 54.44 O
ATOM 6 C5' G B 25 6.136 -6.189 -8.758 1.00 44.92 C
ATOM 7 C4' G B 25 7.540 -6.575 -9.183 1.00 40.92 C
ATOM 8 O4' G B 25 7.759 -6.191 -10.570 1.00 32.10 O
ATOM 9 C3' G B 25 8.685 -5.893 -8.432 1.00 36.96 C
ATOM 10 O3' G B 25 8.977 -6.477 -7.177 1.00 33.76 O
ATOM 11 C2' G B 25 9.821 -5.984 -9.430 1.00 38.30 C
ATOM 12 O2' G B 25 10.324 -7.316 -9.492 1.00 31.40 O
ATOM 13 C1' G B 25 9.067 -5.692 -10.725 1.00 41.42 C
ATOM 14 N9 G B 25 8.971 -4.243 -11.003 1.00 41.87 N
ATOM 15 C8 G B 25 7.822 -3.493 -10.988 1.00 31.08 C
ATOM 16 N7 G B 25 8.026 -2.239 -11.284 1.00 30.42 N
ATOM 17 C5 G B 25 9.387 -2.157 -11.532 1.00 36.97 C
ATOM 18 C6 G B 25 10.176 -1.036 -11.901 1.00 44.27 C
ATOM 19 O6 G B 25 9.797 0.136 -12.101 1.00 42.22 O
ATOM 20 N1 G B 25 11.527 -1.405 -12.016 1.00 45.70 N
ATOM 21 C2 G B 25 12.051 -2.675 -11.815 1.00 37.08 C
ATOM 22 N2 G B 25 13.378 -2.826 -11.986 1.00 24.57 N
ATOM 23 N3 G B 25 11.318 -3.728 -11.485 1.00 22.66 N
ATOM 24 C4 G B 25 10.001 -3.390 -11.360 1.00 43.80 C
ATOM 25 P C B 26 9.265 -5.531 -5.917 1.00 50.32 P
ATOM 26 OP1 C B 26 9.148 -6.379 -4.707 1.00 49.86 O
ATOM 27 OP2 C B 26 8.380 -4.352 -6.043 1.00 51.16 O
ATOM 28 O5' C B 26 10.787 -5.089 -6.141 1.00 38.28 O
TER
Atoms:
OP1: (4.957,2.567,-19.298)
OP2: (6.654,1.016,-20.406)
C3': (4.824,0.393,-15.752)
C1': (5.570,-1.845,-15.694)
C5': (3.797,-0.097,-18.056)
O4': (4.379,-1.838,-16.455)
C8: (7.060,-2.757,-17.527)
O2': (6.938,-0.135,-14.624)
C6: (8.519,-5.698,-16.262)
C5: (7.860,-4.514,-16.632)
C4: (7.013,-3.939,-15.694)
P: (5.316,1.215,-19.790)
C4': (3.892,-0.472,-16.590)
C2': (6.106,-0.413,-15.732)
C2: (7.434,-5.523,-14.220)
N1: (8.283,-6.187,-15.021)
N3: (6.756,-4.397,-14.456)
N6: (9.356,-6.374,-17.036)
N7: (7.878,-3.751,-17.780)
N9: (6.487,-2.818,-16.286)
O5': (5.081,0.117,-18.639)
O3': (4.330,0.459,-14.433)
OP2: (6.654,1.016,-20.406)
C3': (4.824,0.393,-15.752)
C1': (5.570,-1.845,-15.694)
C5': (3.797,-0.097,-18.056)
O4': (4.379,-1.838,-16.455)
C8: (7.060,-2.757,-17.527)
O2': (6.938,-0.135,-14.624)
C6: (8.519,-5.698,-16.262)
C5: (7.860,-4.514,-16.632)
C4: (7.013,-3.939,-15.694)
P: (5.316,1.215,-19.790)
C4': (3.892,-0.472,-16.590)
C2': (6.106,-0.413,-15.732)
C2: (7.434,-5.523,-14.220)
N1: (8.283,-6.187,-15.021)
N3: (6.756,-4.397,-14.456)
N6: (9.356,-6.374,-17.036)
N7: (7.878,-3.751,-17.780)
N9: (6.487,-2.818,-16.286)
O5': (5.081,0.117,-18.639)
O3': (4.330,0.459,-14.433)
OP1: (3.465,-4.831,-8.723)
OP2: (4.714,-2.607,-8.863)
C3': (8.685,-5.893,-8.432)
C1': (9.067,-5.692,-10.725)
C5': (6.136,-6.189,-8.758)
O6: (9.797,0.136,-12.101)
O4': (7.759,-6.191,-10.570)
C8: (7.822,-3.493,-10.988)
C2: (12.051,-2.675,-11.815)
C6: (10.176,-1.036,-11.901)
C5: (9.387,-2.157,-11.532)
C4: (10.001,-3.390,-11.360)
P: (4.649,-4.055,-9.177)
C4': (7.540,-6.575,-9.183)
C2': (9.821,-5.984,-9.430)
O2': (10.324,-7.316,-9.492)
N1: (11.527,-1.405,-12.016)
N2: (13.378,-2.826,-11.986)
N3: (11.318,-3.728,-11.485)
N7: (8.026,-2.239,-11.284)
N9: (8.971,-4.243,-11.003)
O5': (5.984,-4.775,-8.683)
O3': (8.977,-6.477,-7.177)
OP2: (4.714,-2.607,-8.863)
C3': (8.685,-5.893,-8.432)
C1': (9.067,-5.692,-10.725)
C5': (6.136,-6.189,-8.758)
O6: (9.797,0.136,-12.101)
O4': (7.759,-6.191,-10.570)
C8: (7.822,-3.493,-10.988)
C2: (12.051,-2.675,-11.815)
C6: (10.176,-1.036,-11.901)
C5: (9.387,-2.157,-11.532)
C4: (10.001,-3.390,-11.360)
P: (4.649,-4.055,-9.177)
C4': (7.540,-6.575,-9.183)
C2': (9.821,-5.984,-9.430)
O2': (10.324,-7.316,-9.492)
N1: (11.527,-1.405,-12.016)
N2: (13.378,-2.826,-11.986)
N3: (11.318,-3.728,-11.485)
N7: (8.026,-2.239,-11.284)
N9: (8.971,-4.243,-11.003)
O5': (5.984,-4.775,-8.683)
O3': (8.977,-6.477,-7.177)
Image (generated by PyMOL):