ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A38:A137

Extra

PDB:
ATOM 1 O3' G A 37 69.171 146.699 28.901 1.00 52.25 O
ATOM 2 P A A 38 67.875 147.335 29.568 1.00 52.01 P
ATOM 3 OP1 A A 38 67.269 148.219 28.529 1.00 53.08 O
ATOM 4 OP2 A A 38 68.353 147.931 30.839 1.00 52.44 O
ATOM 5 O5' A A 38 66.909 146.085 29.820 1.00 49.77 O
ATOM 6 C5' A A 38 66.289 145.386 28.709 1.00 46.95 C
ATOM 7 C4' A A 38 66.156 143.910 29.010 1.00 45.29 C
ATOM 8 O4' A A 38 67.449 143.254 29.032 1.00 45.63 O
ATOM 9 C3' A A 38 65.554 143.617 30.365 1.00 44.82 C
ATOM 10 O3' A A 38 64.155 143.623 30.280 1.00 43.00 O
ATOM 11 C2' A A 38 66.062 142.225 30.678 1.00 45.08 C
ATOM 12 O2' A A 38 65.268 141.255 30.041 1.00 45.49 O
ATOM 13 C1' A A 38 67.461 142.267 30.058 1.00 45.34 C
ATOM 14 N9 A A 38 68.532 142.609 30.999 1.00 45.63 N
ATOM 15 C8 A A 38 69.259 143.771 30.999 1.00 45.76 C
ATOM 16 N7 A A 38 70.199 143.807 31.907 1.00 46.82 N
ATOM 17 C5 A A 38 70.083 142.590 32.562 1.00 45.77 C
ATOM 18 C6 A A 38 70.805 142.015 33.621 1.00 45.37 C
ATOM 19 N6 A A 38 71.845 142.614 34.209 1.00 46.02 N
ATOM 20 N1 A A 38 70.424 140.791 34.053 1.00 45.06 N
ATOM 21 C2 A A 38 69.394 140.193 33.445 1.00 45.60 C
ATOM 22 N3 A A 38 68.644 140.627 32.430 1.00 46.01 N
ATOM 23 C4 A A 38 69.045 141.847 32.029 1.00 45.81 C
ATOM 24 P A A 39 63.317 144.335 31.425 1.00 43.87 P
ATOM 25 OP1 A A 39 61.910 144.367 30.986 1.00 43.25 O
ATOM 26 OP2 A A 39 64.045 145.605 31.705 1.00 44.24 O
ATOM 27 O5' A A 39 63.455 143.336 32.650 1.00 43.11 O
TER

ATOM 1 O3' A B 136 72.955 136.951 36.976 1.00 39.43 O
ATOM 2 P G B 137 72.033 135.741 37.461 1.00 38.51 P
ATOM 3 OP1 G B 137 71.968 135.785 38.937 1.00 39.93 O
ATOM 4 OP2 G B 137 72.485 134.503 36.788 1.00 38.72 O
ATOM 5 O5' G B 137 70.619 136.113 36.849 1.00 38.23 O
ATOM 6 C5' G B 137 69.867 137.209 37.336 1.00 38.82 C
ATOM 7 C4' G B 137 68.572 137.294 36.586 1.00 41.37 C
ATOM 8 O4' G B 137 68.858 137.202 35.162 1.00 43.33 O
ATOM 9 C3' G B 137 67.563 136.182 36.790 1.00 41.73 C
ATOM 10 O3' G B 137 66.819 136.371 37.990 1.00 42.33 O
ATOM 11 C2' G B 137 66.684 136.371 35.562 1.00 43.18 C
ATOM 12 O2' G B 137 65.931 137.555 35.700 1.00 44.88 O
ATOM 13 C1' G B 137 67.727 136.658 34.484 1.00 44.06 C
ATOM 14 N9 G B 137 68.137 135.479 33.720 1.00 45.15 N
ATOM 15 C8 G B 137 69.362 134.861 33.760 1.00 45.54 C
ATOM 16 N7 G B 137 69.456 133.847 32.944 1.00 46.56 N
ATOM 17 C5 G B 137 68.212 133.778 32.332 1.00 46.02 C
ATOM 18 C6 G B 137 67.724 132.879 31.346 1.00 46.06 C
ATOM 19 O6 G B 137 68.311 131.933 30.805 1.00 45.37 O
ATOM 20 N1 G B 137 66.413 133.172 30.992 1.00 46.34 N
ATOM 21 C2 G B 137 65.663 134.198 31.519 1.00 46.15 C
ATOM 22 N2 G B 137 64.418 134.335 31.022 1.00 44.53 N
ATOM 23 N3 G B 137 66.102 135.035 32.455 1.00 45.69 N
ATOM 24 C4 G B 137 67.379 134.773 32.805 1.00 45.69 C
ATOM 25 P G B 138 66.400 135.089 38.870 1.00 42.72 P
ATOM 26 OP1 G B 138 65.773 135.540 40.133 1.00 40.60 O
ATOM 27 OP2 G B 138 67.576 134.168 38.910 1.00 40.10 O
ATOM 28 O5' G B 138 65.253 134.407 38.008 1.00 43.41 O
TER

Atoms:
OP1: (67.269,148.219,28.529)
OP2: (68.353,147.931,30.839)
C3': (65.554,143.617,30.365)
C1': (67.461,142.267,30.058)
C5': (66.289,145.386,28.709)
O4': (67.449,143.254,29.032)
C8: (69.259,143.771,30.999)
O2': (65.268,141.255,30.041)
C6: (70.805,142.015,33.621)
C5: (70.083,142.590,32.562)
C4: (69.045,141.847,32.029)
P: (67.875,147.335,29.568)
C4': (66.156,143.910,29.010)
C2': (66.062,142.225,30.678)
C2: (69.394,140.193,33.445)
N1: (70.424,140.791,34.053)
N3: (68.644,140.627,32.430)
N6: (71.845,142.614,34.209)
N7: (70.199,143.807,31.907)
N9: (68.532,142.609,30.999)
O5': (66.909,146.085,29.820)
O3': (64.155,143.623,30.280)
OP1: (71.968,135.785,38.937)
OP2: (72.485,134.503,36.788)
C3': (67.563,136.182,36.790)
C1': (67.727,136.658,34.484)
C5': (69.867,137.209,37.336)
O6: (68.311,131.933,30.805)
O4': (68.858,137.202,35.162)
C8: (69.362,134.861,33.760)
C2: (65.663,134.198,31.519)
C6: (67.724,132.879,31.346)
C5: (68.212,133.778,32.332)
C4: (67.379,134.773,32.805)
P: (72.033,135.741,37.461)
C4': (68.572,137.294,36.586)
C2': (66.684,136.371,35.562)
O2': (65.931,137.555,35.700)
N1: (66.413,133.172,30.992)
N2: (64.418,134.335,31.022)
N3: (66.102,135.035,32.455)
N7: (69.456,133.847,32.944)
N9: (68.137,135.479,33.720)
O5': (70.619,136.113,36.849)
O3': (66.819,136.371,37.990)
Image (generated by PyMOL):
PyMOL image
show in jmol