Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0554:01053
Extra
PDB:
ATOM 1 O3' A A 553 -0.707 91.334 97.909 1.00 48.09 O
ATOM 2 P A A 554 -0.819 90.845 99.437 1.00 49.58 P
ATOM 3 OP1 A A 554 -1.024 89.366 99.406 1.00 47.18 O
ATOM 4 OP2 A A 554 -1.786 91.712 100.171 1.00 47.78 O
ATOM 5 O5' A A 554 0.615 91.155 100.055 1.00 49.28 O
ATOM 6 C5' A A 554 1.810 90.528 99.547 1.00 46.76 C
ATOM 7 C4' A A 554 3.013 91.339 99.946 1.00 44.74 C
ATOM 8 O4' A A 554 2.886 92.669 99.374 1.00 45.88 O
ATOM 9 C3' A A 554 3.124 91.604 101.434 1.00 43.99 C
ATOM 10 O3' A A 554 3.720 90.520 102.121 1.00 43.06 O
ATOM 11 C2' A A 554 3.966 92.867 101.474 1.00 43.55 C
ATOM 12 O2' A A 554 5.328 92.602 101.226 1.00 43.92 O
ATOM 13 C1' A A 554 3.393 93.635 100.283 1.00 44.12 C
ATOM 14 N9 A A 554 2.302 94.533 100.655 1.00 42.36 N
ATOM 15 C8 A A 554 0.961 94.255 100.694 1.00 42.71 C
ATOM 16 N7 A A 554 0.223 95.263 101.087 1.00 43.43 N
ATOM 17 C5 A A 554 1.139 96.278 101.316 1.00 43.44 C
ATOM 18 C6 A A 554 0.990 97.611 101.750 1.00 42.97 C
ATOM 19 N6 A A 554 -0.186 98.172 102.038 1.00 42.04 N
ATOM 20 N1 A A 554 2.107 98.356 101.878 1.00 42.03 N
ATOM 21 C2 A A 554 3.287 97.795 101.588 1.00 42.50 C
ATOM 22 N3 A A 554 3.555 96.559 101.170 1.00 43.36 N
ATOM 23 C4 A A 554 2.424 95.842 101.053 1.00 43.13 C
ATOM 24 P U A 555 3.107 90.047 103.529 1.00 44.45 P
ATOM 25 OP1 U A 555 4.022 89.022 104.095 1.00 39.38 O
ATOM 26 OP2 U A 555 1.674 89.711 103.292 1.00 41.97 O
ATOM 27 O5' U A 555 3.161 91.352 104.446 1.00 39.99 O
TER
ATOM 1 O3' G B1052 4.030 103.004 102.653 1.00 41.33 O
ATOM 2 P G B1053 4.797 102.922 104.069 1.00 44.01 P
ATOM 3 OP1 G B1053 3.779 103.217 105.104 1.00 43.66 O
ATOM 4 OP2 G B1053 6.034 103.747 104.011 1.00 45.72 O
ATOM 5 O5' G B1053 5.270 101.401 104.202 1.00 42.53 O
ATOM 6 C5' G B1053 4.342 100.376 104.569 1.00 41.05 C
ATOM 7 C4' G B1053 4.974 98.998 104.489 1.00 41.26 C
ATOM 8 O4' G B1053 5.642 98.804 103.216 1.00 39.55 O
ATOM 9 C3' G B1053 6.053 98.582 105.480 1.00 39.64 C
ATOM 10 O3' G B1053 5.502 98.261 106.756 1.00 41.40 O
ATOM 11 C2' G B1053 6.545 97.305 104.814 1.00 39.88 C
ATOM 12 O2' G B1053 5.618 96.251 104.954 1.00 38.08 O
ATOM 13 C1' G B1053 6.543 97.713 103.339 1.00 41.16 C
ATOM 14 N9 G B1053 7.877 98.118 102.899 1.00 43.57 N
ATOM 15 C8 G B1053 8.330 99.387 102.614 1.00 43.35 C
ATOM 16 N7 G B1053 9.589 99.413 102.260 1.00 43.47 N
ATOM 17 C5 G B1053 9.991 98.084 102.309 1.00 42.87 C
ATOM 18 C6 G B1053 11.252 97.488 102.026 1.00 42.91 C
ATOM 19 O6 G B1053 12.294 98.033 101.645 1.00 44.47 O
ATOM 20 N1 G B1053 11.224 96.112 102.223 1.00 43.00 N
ATOM 21 C2 G B1053 10.125 95.394 102.626 1.00 43.92 C
ATOM 22 N2 G B1053 10.295 94.075 102.766 1.00 41.10 N
ATOM 23 N3 G B1053 8.942 95.933 102.876 1.00 44.05 N
ATOM 24 C4 G B1053 8.948 97.272 102.702 1.00 43.35 C
ATOM 25 P U B1054 6.418 98.331 108.083 1.00 41.89 P
ATOM 26 OP1 U B1054 5.518 98.022 109.221 1.00 41.31 O
ATOM 27 OP2 U B1054 7.182 99.604 108.090 1.00 42.60 O
ATOM 28 O5' U B1054 7.436 97.119 107.927 1.00 37.64 O
TER
ATOM 2 P A A 554 -0.819 90.845 99.437 1.00 49.58 P
ATOM 3 OP1 A A 554 -1.024 89.366 99.406 1.00 47.18 O
ATOM 4 OP2 A A 554 -1.786 91.712 100.171 1.00 47.78 O
ATOM 5 O5' A A 554 0.615 91.155 100.055 1.00 49.28 O
ATOM 6 C5' A A 554 1.810 90.528 99.547 1.00 46.76 C
ATOM 7 C4' A A 554 3.013 91.339 99.946 1.00 44.74 C
ATOM 8 O4' A A 554 2.886 92.669 99.374 1.00 45.88 O
ATOM 9 C3' A A 554 3.124 91.604 101.434 1.00 43.99 C
ATOM 10 O3' A A 554 3.720 90.520 102.121 1.00 43.06 O
ATOM 11 C2' A A 554 3.966 92.867 101.474 1.00 43.55 C
ATOM 12 O2' A A 554 5.328 92.602 101.226 1.00 43.92 O
ATOM 13 C1' A A 554 3.393 93.635 100.283 1.00 44.12 C
ATOM 14 N9 A A 554 2.302 94.533 100.655 1.00 42.36 N
ATOM 15 C8 A A 554 0.961 94.255 100.694 1.00 42.71 C
ATOM 16 N7 A A 554 0.223 95.263 101.087 1.00 43.43 N
ATOM 17 C5 A A 554 1.139 96.278 101.316 1.00 43.44 C
ATOM 18 C6 A A 554 0.990 97.611 101.750 1.00 42.97 C
ATOM 19 N6 A A 554 -0.186 98.172 102.038 1.00 42.04 N
ATOM 20 N1 A A 554 2.107 98.356 101.878 1.00 42.03 N
ATOM 21 C2 A A 554 3.287 97.795 101.588 1.00 42.50 C
ATOM 22 N3 A A 554 3.555 96.559 101.170 1.00 43.36 N
ATOM 23 C4 A A 554 2.424 95.842 101.053 1.00 43.13 C
ATOM 24 P U A 555 3.107 90.047 103.529 1.00 44.45 P
ATOM 25 OP1 U A 555 4.022 89.022 104.095 1.00 39.38 O
ATOM 26 OP2 U A 555 1.674 89.711 103.292 1.00 41.97 O
ATOM 27 O5' U A 555 3.161 91.352 104.446 1.00 39.99 O
TER
ATOM 1 O3' G B1052 4.030 103.004 102.653 1.00 41.33 O
ATOM 2 P G B1053 4.797 102.922 104.069 1.00 44.01 P
ATOM 3 OP1 G B1053 3.779 103.217 105.104 1.00 43.66 O
ATOM 4 OP2 G B1053 6.034 103.747 104.011 1.00 45.72 O
ATOM 5 O5' G B1053 5.270 101.401 104.202 1.00 42.53 O
ATOM 6 C5' G B1053 4.342 100.376 104.569 1.00 41.05 C
ATOM 7 C4' G B1053 4.974 98.998 104.489 1.00 41.26 C
ATOM 8 O4' G B1053 5.642 98.804 103.216 1.00 39.55 O
ATOM 9 C3' G B1053 6.053 98.582 105.480 1.00 39.64 C
ATOM 10 O3' G B1053 5.502 98.261 106.756 1.00 41.40 O
ATOM 11 C2' G B1053 6.545 97.305 104.814 1.00 39.88 C
ATOM 12 O2' G B1053 5.618 96.251 104.954 1.00 38.08 O
ATOM 13 C1' G B1053 6.543 97.713 103.339 1.00 41.16 C
ATOM 14 N9 G B1053 7.877 98.118 102.899 1.00 43.57 N
ATOM 15 C8 G B1053 8.330 99.387 102.614 1.00 43.35 C
ATOM 16 N7 G B1053 9.589 99.413 102.260 1.00 43.47 N
ATOM 17 C5 G B1053 9.991 98.084 102.309 1.00 42.87 C
ATOM 18 C6 G B1053 11.252 97.488 102.026 1.00 42.91 C
ATOM 19 O6 G B1053 12.294 98.033 101.645 1.00 44.47 O
ATOM 20 N1 G B1053 11.224 96.112 102.223 1.00 43.00 N
ATOM 21 C2 G B1053 10.125 95.394 102.626 1.00 43.92 C
ATOM 22 N2 G B1053 10.295 94.075 102.766 1.00 41.10 N
ATOM 23 N3 G B1053 8.942 95.933 102.876 1.00 44.05 N
ATOM 24 C4 G B1053 8.948 97.272 102.702 1.00 43.35 C
ATOM 25 P U B1054 6.418 98.331 108.083 1.00 41.89 P
ATOM 26 OP1 U B1054 5.518 98.022 109.221 1.00 41.31 O
ATOM 27 OP2 U B1054 7.182 99.604 108.090 1.00 42.60 O
ATOM 28 O5' U B1054 7.436 97.119 107.927 1.00 37.64 O
TER
Atoms:
OP1: (-1.024,89.366,99.406)
OP2: (-1.786,91.712,100.171)
C3': (3.124,91.604,101.434)
C1': (3.393,93.635,100.283)
C5': (1.810,90.528,99.547)
O4': (2.886,92.669,99.374)
C8: (0.961,94.255,100.694)
O2': (5.328,92.602,101.226)
C6: (0.990,97.611,101.750)
C5: (1.139,96.278,101.316)
C4: (2.424,95.842,101.053)
P: (-0.819,90.845,99.437)
C4': (3.013,91.339,99.946)
C2': (3.966,92.867,101.474)
C2: (3.287,97.795,101.588)
N1: (2.107,98.356,101.878)
N3: (3.555,96.559,101.170)
N6: (-0.186,98.172,102.038)
N7: (0.223,95.263,101.087)
N9: (2.302,94.533,100.655)
O5': (0.615,91.155,100.055)
O3': (3.720,90.520,102.121)
OP2: (-1.786,91.712,100.171)
C3': (3.124,91.604,101.434)
C1': (3.393,93.635,100.283)
C5': (1.810,90.528,99.547)
O4': (2.886,92.669,99.374)
C8: (0.961,94.255,100.694)
O2': (5.328,92.602,101.226)
C6: (0.990,97.611,101.750)
C5: (1.139,96.278,101.316)
C4: (2.424,95.842,101.053)
P: (-0.819,90.845,99.437)
C4': (3.013,91.339,99.946)
C2': (3.966,92.867,101.474)
C2: (3.287,97.795,101.588)
N1: (2.107,98.356,101.878)
N3: (3.555,96.559,101.170)
N6: (-0.186,98.172,102.038)
N7: (0.223,95.263,101.087)
N9: (2.302,94.533,100.655)
O5': (0.615,91.155,100.055)
O3': (3.720,90.520,102.121)
OP1: (3.779,103.217,105.104)
OP2: (6.034,103.747,104.011)
C3': (6.053,98.582,105.480)
C1': (6.543,97.713,103.339)
C5': (4.342,100.376,104.569)
O6: (12.294,98.033,101.645)
O4': (5.642,98.804,103.216)
C8: (8.330,99.387,102.614)
C2: (10.125,95.394,102.626)
C6: (11.252,97.488,102.026)
C5: (9.991,98.084,102.309)
C4: (8.948,97.272,102.702)
P: (4.797,102.922,104.069)
C4': (4.974,98.998,104.489)
C2': (6.545,97.305,104.814)
O2': (5.618,96.251,104.954)
N1: (11.224,96.112,102.223)
N2: (10.295,94.075,102.766)
N3: (8.942,95.933,102.876)
N7: (9.589,99.413,102.260)
N9: (7.877,98.118,102.899)
O5': (5.270,101.401,104.202)
O3': (5.502,98.261,106.756)
OP2: (6.034,103.747,104.011)
C3': (6.053,98.582,105.480)
C1': (6.543,97.713,103.339)
C5': (4.342,100.376,104.569)
O6: (12.294,98.033,101.645)
O4': (5.642,98.804,103.216)
C8: (8.330,99.387,102.614)
C2: (10.125,95.394,102.626)
C6: (11.252,97.488,102.026)
C5: (9.991,98.084,102.309)
C4: (8.948,97.272,102.702)
P: (4.797,102.922,104.069)
C4': (4.974,98.998,104.489)
C2': (6.545,97.305,104.814)
O2': (5.618,96.251,104.954)
N1: (11.224,96.112,102.223)
N2: (10.295,94.075,102.766)
N3: (8.942,95.933,102.876)
N7: (9.589,99.413,102.260)
N9: (7.877,98.118,102.899)
O5': (5.270,101.401,104.202)
O3': (5.502,98.261,106.756)
Image (generated by PyMOL):