Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1144:A1004
Extra
PDB:
ATOM 1 O3' C A1143 -114.983-113.734 -10.291 1.00 0.01 O
ATOM 2 P A A1144 -114.100-113.948 -8.977 1.00 0.01 P
ATOM 3 OP1 A A1144 -114.668-115.092 -8.245 1.00 0.01 O
ATOM 4 OP2 A A1144 -114.002-112.625 -8.308 1.00 0.01 O
ATOM 5 O5' A A1144 -112.697-114.350 -9.564 1.00 0.01 O
ATOM 6 C5' A A1144 -111.541-113.657 -9.152 1.00 0.01 C
ATOM 7 C4' A A1144 -110.437-113.775 -10.149 1.00 0.01 C
ATOM 8 O4' A A1144 -110.667-112.880 -11.264 1.00 0.01 O
ATOM 9 C3' A A1144 -109.099-113.374 -9.636 1.00 0.01 C
ATOM 10 O3' A A1144 -108.515-114.397 -8.873 1.00 0.01 O
ATOM 11 C2' A A1144 -108.358-113.041 -10.913 1.00 0.01 C
ATOM 12 O2' A A1144 -107.996-114.222 -11.598 1.00 0.01 O
ATOM 13 C1' A A1144 -109.448-112.350 -11.708 1.00 0.01 C
ATOM 14 N9 A A1144 -109.460-110.902 -11.467 1.00 0.06 N
ATOM 15 C8 A A1144 -110.375-110.157 -10.763 1.00 0.06 C
ATOM 16 N7 A A1144 -110.142-108.871 -10.692 1.00 0.06 N
ATOM 17 C5 A A1144 -108.972-108.776 -11.388 1.00 0.06 C
ATOM 18 C6 A A1144 -108.195-107.662 -11.664 1.00 0.06 C
ATOM 19 N6 A A1144 -108.527-106.443 -11.233 1.00 0.06 N
ATOM 20 N1 A A1144 -107.078-107.860 -12.394 1.00 0.06 N
ATOM 21 C2 A A1144 -106.809-109.112 -12.791 1.00 0.06 C
ATOM 22 N3 A A1144 -107.467-110.254 -12.585 1.00 0.06 N
ATOM 23 C4 A A1144 -108.546-110.000 -11.868 1.00 0.06 C
ATOM 24 P C A1145 -108.044-114.116 -7.371 1.00 0.01 P
ATOM 25 OP1 C A1145 -107.807-115.433 -6.741 1.00 0.01 O
ATOM 26 OP2 C A1145 -109.028-113.197 -6.754 1.00 0.01 O
ATOM 27 O5' C A1145 -106.660-113.377 -7.593 1.00 0.01 O
TER
ATOM 1 O3' A B1003 -100.882-111.258 -13.009 1.00 0.01 O
ATOM 2 P G B1004 -100.740-111.690 -14.528 1.00 0.01 P
ATOM 3 OP1 G B1004 -101.724-112.751 -14.745 1.00 0.01 O
ATOM 4 OP2 G B1004 -99.317-111.967 -14.782 1.00 0.01 O
ATOM 5 O5' G B1004 -101.162-110.378 -15.297 1.00 0.01 O
ATOM 6 C5' G B1004 -102.461-109.853 -15.175 1.00 0.01 C
ATOM 7 C4' G B1004 -103.288-110.204 -16.367 1.00 0.01 C
ATOM 8 O4' G B1004 -104.645-109.774 -16.120 1.00 0.01 O
ATOM 9 C3' G B1004 -102.870-109.529 -17.674 1.00 0.01 C
ATOM 10 O3' G B1004 -103.315-110.315 -18.795 1.00 0.01 O
ATOM 11 C2' G B1004 -103.695-108.270 -17.618 1.00 0.01 C
ATOM 12 O2' G B1004 -103.844-107.623 -18.854 1.00 0.01 O
ATOM 13 C1' G B1004 -105.015-108.840 -17.102 1.00 0.01 C
ATOM 14 N9 G B1004 -105.909-107.873 -16.481 1.00 0.01 N
ATOM 15 C8 G B1004 -105.749-106.533 -16.273 1.00 0.01 C
ATOM 16 N7 G B1004 -106.773-105.987 -15.671 1.00 0.01 N
ATOM 17 C5 G B1004 -107.649-107.048 -15.464 1.00 0.01 C
ATOM 18 C6 G B1004 -108.927-107.081 -14.862 1.00 0.01 C
ATOM 19 O6 G B1004 -109.561-106.128 -14.360 1.00 0.01 O
ATOM 20 N1 G B1004 -109.439-108.364 -14.888 1.00 0.01 N
ATOM 21 C2 G B1004 -108.787-109.429 -15.415 1.00 0.01 C
ATOM 22 N2 G B1004 -109.389-110.609 -15.373 1.00 0.01 N
ATOM 23 N3 G B1004 -107.617-109.402 -15.966 1.00 0.01 N
ATOM 24 C4 G B1004 -107.115-108.194 -15.960 1.00 0.01 C
ATOM 25 P U B1005 -102.337-111.359 -19.532 1.00 0.01 P
ATOM 26 OP1 U B1005 -103.013-112.649 -19.562 1.00 0.01 O
ATOM 27 OP2 U B1005 -101.035-111.273 -18.889 1.00 0.01 O
ATOM 28 O5' U B1005 -102.247-110.799 -20.986 1.00 0.01 O
TER
ATOM 2 P A A1144 -114.100-113.948 -8.977 1.00 0.01 P
ATOM 3 OP1 A A1144 -114.668-115.092 -8.245 1.00 0.01 O
ATOM 4 OP2 A A1144 -114.002-112.625 -8.308 1.00 0.01 O
ATOM 5 O5' A A1144 -112.697-114.350 -9.564 1.00 0.01 O
ATOM 6 C5' A A1144 -111.541-113.657 -9.152 1.00 0.01 C
ATOM 7 C4' A A1144 -110.437-113.775 -10.149 1.00 0.01 C
ATOM 8 O4' A A1144 -110.667-112.880 -11.264 1.00 0.01 O
ATOM 9 C3' A A1144 -109.099-113.374 -9.636 1.00 0.01 C
ATOM 10 O3' A A1144 -108.515-114.397 -8.873 1.00 0.01 O
ATOM 11 C2' A A1144 -108.358-113.041 -10.913 1.00 0.01 C
ATOM 12 O2' A A1144 -107.996-114.222 -11.598 1.00 0.01 O
ATOM 13 C1' A A1144 -109.448-112.350 -11.708 1.00 0.01 C
ATOM 14 N9 A A1144 -109.460-110.902 -11.467 1.00 0.06 N
ATOM 15 C8 A A1144 -110.375-110.157 -10.763 1.00 0.06 C
ATOM 16 N7 A A1144 -110.142-108.871 -10.692 1.00 0.06 N
ATOM 17 C5 A A1144 -108.972-108.776 -11.388 1.00 0.06 C
ATOM 18 C6 A A1144 -108.195-107.662 -11.664 1.00 0.06 C
ATOM 19 N6 A A1144 -108.527-106.443 -11.233 1.00 0.06 N
ATOM 20 N1 A A1144 -107.078-107.860 -12.394 1.00 0.06 N
ATOM 21 C2 A A1144 -106.809-109.112 -12.791 1.00 0.06 C
ATOM 22 N3 A A1144 -107.467-110.254 -12.585 1.00 0.06 N
ATOM 23 C4 A A1144 -108.546-110.000 -11.868 1.00 0.06 C
ATOM 24 P C A1145 -108.044-114.116 -7.371 1.00 0.01 P
ATOM 25 OP1 C A1145 -107.807-115.433 -6.741 1.00 0.01 O
ATOM 26 OP2 C A1145 -109.028-113.197 -6.754 1.00 0.01 O
ATOM 27 O5' C A1145 -106.660-113.377 -7.593 1.00 0.01 O
TER
ATOM 1 O3' A B1003 -100.882-111.258 -13.009 1.00 0.01 O
ATOM 2 P G B1004 -100.740-111.690 -14.528 1.00 0.01 P
ATOM 3 OP1 G B1004 -101.724-112.751 -14.745 1.00 0.01 O
ATOM 4 OP2 G B1004 -99.317-111.967 -14.782 1.00 0.01 O
ATOM 5 O5' G B1004 -101.162-110.378 -15.297 1.00 0.01 O
ATOM 6 C5' G B1004 -102.461-109.853 -15.175 1.00 0.01 C
ATOM 7 C4' G B1004 -103.288-110.204 -16.367 1.00 0.01 C
ATOM 8 O4' G B1004 -104.645-109.774 -16.120 1.00 0.01 O
ATOM 9 C3' G B1004 -102.870-109.529 -17.674 1.00 0.01 C
ATOM 10 O3' G B1004 -103.315-110.315 -18.795 1.00 0.01 O
ATOM 11 C2' G B1004 -103.695-108.270 -17.618 1.00 0.01 C
ATOM 12 O2' G B1004 -103.844-107.623 -18.854 1.00 0.01 O
ATOM 13 C1' G B1004 -105.015-108.840 -17.102 1.00 0.01 C
ATOM 14 N9 G B1004 -105.909-107.873 -16.481 1.00 0.01 N
ATOM 15 C8 G B1004 -105.749-106.533 -16.273 1.00 0.01 C
ATOM 16 N7 G B1004 -106.773-105.987 -15.671 1.00 0.01 N
ATOM 17 C5 G B1004 -107.649-107.048 -15.464 1.00 0.01 C
ATOM 18 C6 G B1004 -108.927-107.081 -14.862 1.00 0.01 C
ATOM 19 O6 G B1004 -109.561-106.128 -14.360 1.00 0.01 O
ATOM 20 N1 G B1004 -109.439-108.364 -14.888 1.00 0.01 N
ATOM 21 C2 G B1004 -108.787-109.429 -15.415 1.00 0.01 C
ATOM 22 N2 G B1004 -109.389-110.609 -15.373 1.00 0.01 N
ATOM 23 N3 G B1004 -107.617-109.402 -15.966 1.00 0.01 N
ATOM 24 C4 G B1004 -107.115-108.194 -15.960 1.00 0.01 C
ATOM 25 P U B1005 -102.337-111.359 -19.532 1.00 0.01 P
ATOM 26 OP1 U B1005 -103.013-112.649 -19.562 1.00 0.01 O
ATOM 27 OP2 U B1005 -101.035-111.273 -18.889 1.00 0.01 O
ATOM 28 O5' U B1005 -102.247-110.799 -20.986 1.00 0.01 O
TER
Atoms:
OP1: (-114.668,-115.092,-8.245)
OP2: (-114.002,-112.625,-8.308)
C3': (-109.099,-113.374,-9.636)
C1': (-109.448,-112.350,-11.708)
C5': (-111.541,-113.657,-9.152)
O4': (-110.667,-112.880,-11.264)
C8: (-110.375,-110.157,-10.763)
O2': (-107.996,-114.222,-11.598)
C6: (-108.195,-107.662,-11.664)
C5: (-108.972,-108.776,-11.388)
C4: (-108.546,-110.000,-11.868)
P: (-114.100,-113.948,-8.977)
C4': (-110.437,-113.775,-10.149)
C2': (-108.358,-113.041,-10.913)
C2: (-106.809,-109.112,-12.791)
N1: (-107.078,-107.860,-12.394)
N3: (-107.467,-110.254,-12.585)
N6: (-108.527,-106.443,-11.233)
N7: (-110.142,-108.871,-10.692)
N9: (-109.460,-110.902,-11.467)
O5': (-112.697,-114.350,-9.564)
O3': (-108.515,-114.397,-8.873)
OP2: (-114.002,-112.625,-8.308)
C3': (-109.099,-113.374,-9.636)
C1': (-109.448,-112.350,-11.708)
C5': (-111.541,-113.657,-9.152)
O4': (-110.667,-112.880,-11.264)
C8: (-110.375,-110.157,-10.763)
O2': (-107.996,-114.222,-11.598)
C6: (-108.195,-107.662,-11.664)
C5: (-108.972,-108.776,-11.388)
C4: (-108.546,-110.000,-11.868)
P: (-114.100,-113.948,-8.977)
C4': (-110.437,-113.775,-10.149)
C2': (-108.358,-113.041,-10.913)
C2: (-106.809,-109.112,-12.791)
N1: (-107.078,-107.860,-12.394)
N3: (-107.467,-110.254,-12.585)
N6: (-108.527,-106.443,-11.233)
N7: (-110.142,-108.871,-10.692)
N9: (-109.460,-110.902,-11.467)
O5': (-112.697,-114.350,-9.564)
O3': (-108.515,-114.397,-8.873)
OP1: (-101.724,-112.751,-14.745)
OP2: (-99.317,-111.967,-14.782)
C3': (-102.870,-109.529,-17.674)
C1': (-105.015,-108.840,-17.102)
C5': (-102.461,-109.853,-15.175)
O6: (-109.561,-106.128,-14.360)
O4': (-104.645,-109.774,-16.120)
C8: (-105.749,-106.533,-16.273)
C2: (-108.787,-109.429,-15.415)
C6: (-108.927,-107.081,-14.862)
C5: (-107.649,-107.048,-15.464)
C4: (-107.115,-108.194,-15.960)
P: (-100.740,-111.690,-14.528)
C4': (-103.288,-110.204,-16.367)
C2': (-103.695,-108.270,-17.618)
O2': (-103.844,-107.623,-18.854)
N1: (-109.439,-108.364,-14.888)
N2: (-109.389,-110.609,-15.373)
N3: (-107.617,-109.402,-15.966)
N7: (-106.773,-105.987,-15.671)
N9: (-105.909,-107.873,-16.481)
O5': (-101.162,-110.378,-15.297)
O3': (-103.315,-110.315,-18.795)
OP2: (-99.317,-111.967,-14.782)
C3': (-102.870,-109.529,-17.674)
C1': (-105.015,-108.840,-17.102)
C5': (-102.461,-109.853,-15.175)
O6: (-109.561,-106.128,-14.360)
O4': (-104.645,-109.774,-16.120)
C8: (-105.749,-106.533,-16.273)
C2: (-108.787,-109.429,-15.415)
C6: (-108.927,-107.081,-14.862)
C5: (-107.649,-107.048,-15.464)
C4: (-107.115,-108.194,-15.960)
P: (-100.740,-111.690,-14.528)
C4': (-103.288,-110.204,-16.367)
C2': (-103.695,-108.270,-17.618)
O2': (-103.844,-107.623,-18.854)
N1: (-109.439,-108.364,-14.888)
N2: (-109.389,-110.609,-15.373)
N3: (-107.617,-109.402,-15.966)
N7: (-106.773,-105.987,-15.671)
N9: (-105.909,-107.873,-16.481)
O5': (-101.162,-110.378,-15.297)
O3': (-103.315,-110.315,-18.795)
Image (generated by PyMOL):