Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11667:11733
Extra
PDB:
ATOM 1 O3' U A1666 -14.597 42.551 121.881 1.00 60.57 O
ATOM 2 P A A1667 -15.374 41.517 122.829 1.00 61.82 P
ATOM 3 OP1 A A1667 -16.808 41.688 122.581 1.00 62.15 O
ATOM 4 OP2 A A1667 -14.853 41.701 124.197 1.00 62.23 O
ATOM 5 O5' A A1667 -14.920 40.139 122.284 1.00 61.05 O
ATOM 6 C5' A A1667 -14.865 39.897 120.901 1.00 60.50 C
ATOM 7 C4' A A1667 -14.170 38.617 120.677 1.00 59.82 C
ATOM 8 O4' A A1667 -12.741 38.807 120.831 1.00 59.61 O
ATOM 9 C3' A A1667 -14.528 37.577 121.700 1.00 59.89 C
ATOM 10 O3' A A1667 -15.742 36.932 121.371 1.00 59.86 O
ATOM 11 C2' A A1667 -13.305 36.674 121.708 1.00 59.32 C
ATOM 12 O2' A A1667 -13.345 35.758 120.632 1.00 58.68 O
ATOM 13 C1' A A1667 -12.176 37.675 121.439 1.00 59.30 C
ATOM 14 N9 A A1667 -11.505 38.092 122.676 1.00 59.70 N
ATOM 15 C8 A A1667 -11.606 39.283 123.324 1.00 60.34 C
ATOM 16 N7 A A1667 -10.893 39.330 124.427 1.00 60.58 N
ATOM 17 C5 A A1667 -10.273 38.091 124.511 1.00 60.06 C
ATOM 18 C6 A A1667 -9.377 37.507 125.439 1.00 60.01 C
ATOM 19 N6 A A1667 -8.914 38.139 126.516 1.00 60.51 N
ATOM 20 N1 A A1667 -8.938 36.242 125.235 1.00 59.43 N
ATOM 21 C2 A A1667 -9.374 35.613 124.140 1.00 58.94 C
ATOM 22 N3 A A1667 -10.220 36.048 123.194 1.00 58.93 N
ATOM 23 C4 A A1667 -10.647 37.312 123.435 1.00 59.51 C
ATOM 24 P U A1668 -16.939 36.810 122.437 1.00 64.09 P
ATOM 25 OP1 U A1668 -18.084 36.279 121.716 1.00 63.97 O
ATOM 26 OP2 U A1668 -17.094 38.112 123.131 1.00 64.79 O
ATOM 27 O5' U A1668 -16.372 35.737 123.450 1.00 63.95 O
TER
ATOM 1 O3' C B1732 -8.819 32.143 128.666 1.00 69.97 O
ATOM 2 P G B1733 -9.061 30.615 128.225 1.00 57.93 P
ATOM 3 OP1 G B1733 -10.413 30.240 128.709 1.00 58.28 O
ATOM 4 OP2 G B1733 -7.888 29.832 128.691 1.00 57.65 O
ATOM 5 O5' G B1733 -9.050 30.682 126.632 1.00 57.36 O
ATOM 6 C5' G B1733 -10.022 31.412 125.925 1.00 57.52 C
ATOM 7 C4' G B1733 -9.681 31.489 124.469 1.00 56.96 C
ATOM 8 O4' G B1733 -8.451 32.255 124.290 1.00 56.87 O
ATOM 9 C3' G B1733 -9.394 30.162 123.781 1.00 56.28 C
ATOM 10 O3' G B1733 -10.572 29.446 123.422 1.00 56.21 O
ATOM 11 C2' G B1733 -8.551 30.598 122.584 1.00 55.82 C
ATOM 12 O2' G B1733 -9.371 31.129 121.555 1.00 55.80 O
ATOM 13 C1' G B1733 -7.725 31.742 123.194 1.00 56.19 C
ATOM 14 N9 G B1733 -6.422 31.251 123.671 1.00 55.95 N
ATOM 15 C8 G B1733 -5.959 30.953 124.931 1.00 56.22 C
ATOM 16 N7 G B1733 -4.734 30.475 124.913 1.00 55.84 N
ATOM 17 C5 G B1733 -4.396 30.451 123.556 1.00 55.30 C
ATOM 18 C6 G B1733 -3.221 30.036 122.854 1.00 54.73 C
ATOM 19 O6 G B1733 -2.165 29.581 123.311 1.00 54.57 O
ATOM 20 N1 G B1733 -3.315 30.178 121.473 1.00 54.32 N
ATOM 21 C2 G B1733 -4.400 30.648 120.820 1.00 54.43 C
ATOM 22 N2 G B1733 -4.303 30.693 119.484 1.00 53.99 N
ATOM 23 N3 G B1733 -5.493 31.045 121.447 1.00 54.96 N
ATOM 24 C4 G B1733 -5.428 30.919 122.791 1.00 55.36 C
ATOM 25 P G B1734 -10.491 27.877 123.039 1.00 62.35 P
ATOM 26 OP1 G B1734 -11.878 27.415 122.800 1.00 62.44 O
ATOM 27 OP2 G B1734 -9.699 27.219 124.082 1.00 62.36 O
ATOM 28 O5' G B1734 -9.679 27.862 121.670 1.00 61.71 O
TER
ATOM 2 P A A1667 -15.374 41.517 122.829 1.00 61.82 P
ATOM 3 OP1 A A1667 -16.808 41.688 122.581 1.00 62.15 O
ATOM 4 OP2 A A1667 -14.853 41.701 124.197 1.00 62.23 O
ATOM 5 O5' A A1667 -14.920 40.139 122.284 1.00 61.05 O
ATOM 6 C5' A A1667 -14.865 39.897 120.901 1.00 60.50 C
ATOM 7 C4' A A1667 -14.170 38.617 120.677 1.00 59.82 C
ATOM 8 O4' A A1667 -12.741 38.807 120.831 1.00 59.61 O
ATOM 9 C3' A A1667 -14.528 37.577 121.700 1.00 59.89 C
ATOM 10 O3' A A1667 -15.742 36.932 121.371 1.00 59.86 O
ATOM 11 C2' A A1667 -13.305 36.674 121.708 1.00 59.32 C
ATOM 12 O2' A A1667 -13.345 35.758 120.632 1.00 58.68 O
ATOM 13 C1' A A1667 -12.176 37.675 121.439 1.00 59.30 C
ATOM 14 N9 A A1667 -11.505 38.092 122.676 1.00 59.70 N
ATOM 15 C8 A A1667 -11.606 39.283 123.324 1.00 60.34 C
ATOM 16 N7 A A1667 -10.893 39.330 124.427 1.00 60.58 N
ATOM 17 C5 A A1667 -10.273 38.091 124.511 1.00 60.06 C
ATOM 18 C6 A A1667 -9.377 37.507 125.439 1.00 60.01 C
ATOM 19 N6 A A1667 -8.914 38.139 126.516 1.00 60.51 N
ATOM 20 N1 A A1667 -8.938 36.242 125.235 1.00 59.43 N
ATOM 21 C2 A A1667 -9.374 35.613 124.140 1.00 58.94 C
ATOM 22 N3 A A1667 -10.220 36.048 123.194 1.00 58.93 N
ATOM 23 C4 A A1667 -10.647 37.312 123.435 1.00 59.51 C
ATOM 24 P U A1668 -16.939 36.810 122.437 1.00 64.09 P
ATOM 25 OP1 U A1668 -18.084 36.279 121.716 1.00 63.97 O
ATOM 26 OP2 U A1668 -17.094 38.112 123.131 1.00 64.79 O
ATOM 27 O5' U A1668 -16.372 35.737 123.450 1.00 63.95 O
TER
ATOM 1 O3' C B1732 -8.819 32.143 128.666 1.00 69.97 O
ATOM 2 P G B1733 -9.061 30.615 128.225 1.00 57.93 P
ATOM 3 OP1 G B1733 -10.413 30.240 128.709 1.00 58.28 O
ATOM 4 OP2 G B1733 -7.888 29.832 128.691 1.00 57.65 O
ATOM 5 O5' G B1733 -9.050 30.682 126.632 1.00 57.36 O
ATOM 6 C5' G B1733 -10.022 31.412 125.925 1.00 57.52 C
ATOM 7 C4' G B1733 -9.681 31.489 124.469 1.00 56.96 C
ATOM 8 O4' G B1733 -8.451 32.255 124.290 1.00 56.87 O
ATOM 9 C3' G B1733 -9.394 30.162 123.781 1.00 56.28 C
ATOM 10 O3' G B1733 -10.572 29.446 123.422 1.00 56.21 O
ATOM 11 C2' G B1733 -8.551 30.598 122.584 1.00 55.82 C
ATOM 12 O2' G B1733 -9.371 31.129 121.555 1.00 55.80 O
ATOM 13 C1' G B1733 -7.725 31.742 123.194 1.00 56.19 C
ATOM 14 N9 G B1733 -6.422 31.251 123.671 1.00 55.95 N
ATOM 15 C8 G B1733 -5.959 30.953 124.931 1.00 56.22 C
ATOM 16 N7 G B1733 -4.734 30.475 124.913 1.00 55.84 N
ATOM 17 C5 G B1733 -4.396 30.451 123.556 1.00 55.30 C
ATOM 18 C6 G B1733 -3.221 30.036 122.854 1.00 54.73 C
ATOM 19 O6 G B1733 -2.165 29.581 123.311 1.00 54.57 O
ATOM 20 N1 G B1733 -3.315 30.178 121.473 1.00 54.32 N
ATOM 21 C2 G B1733 -4.400 30.648 120.820 1.00 54.43 C
ATOM 22 N2 G B1733 -4.303 30.693 119.484 1.00 53.99 N
ATOM 23 N3 G B1733 -5.493 31.045 121.447 1.00 54.96 N
ATOM 24 C4 G B1733 -5.428 30.919 122.791 1.00 55.36 C
ATOM 25 P G B1734 -10.491 27.877 123.039 1.00 62.35 P
ATOM 26 OP1 G B1734 -11.878 27.415 122.800 1.00 62.44 O
ATOM 27 OP2 G B1734 -9.699 27.219 124.082 1.00 62.36 O
ATOM 28 O5' G B1734 -9.679 27.862 121.670 1.00 61.71 O
TER
Atoms:
OP1: (-16.808,41.688,122.581)
OP2: (-14.853,41.701,124.197)
C3': (-14.528,37.577,121.700)
C1': (-12.176,37.675,121.439)
C5': (-14.865,39.897,120.901)
O4': (-12.741,38.807,120.831)
C8: (-11.606,39.283,123.324)
O2': (-13.345,35.758,120.632)
C6: (-9.377,37.507,125.439)
C5: (-10.273,38.091,124.511)
C4: (-10.647,37.312,123.435)
P: (-15.374,41.517,122.829)
C4': (-14.170,38.617,120.677)
C2': (-13.305,36.674,121.708)
C2: (-9.374,35.613,124.140)
N1: (-8.938,36.242,125.235)
N3: (-10.220,36.048,123.194)
N6: (-8.914,38.139,126.516)
N7: (-10.893,39.330,124.427)
N9: (-11.505,38.092,122.676)
O5': (-14.920,40.139,122.284)
O3': (-15.742,36.932,121.371)
OP2: (-14.853,41.701,124.197)
C3': (-14.528,37.577,121.700)
C1': (-12.176,37.675,121.439)
C5': (-14.865,39.897,120.901)
O4': (-12.741,38.807,120.831)
C8: (-11.606,39.283,123.324)
O2': (-13.345,35.758,120.632)
C6: (-9.377,37.507,125.439)
C5: (-10.273,38.091,124.511)
C4: (-10.647,37.312,123.435)
P: (-15.374,41.517,122.829)
C4': (-14.170,38.617,120.677)
C2': (-13.305,36.674,121.708)
C2: (-9.374,35.613,124.140)
N1: (-8.938,36.242,125.235)
N3: (-10.220,36.048,123.194)
N6: (-8.914,38.139,126.516)
N7: (-10.893,39.330,124.427)
N9: (-11.505,38.092,122.676)
O5': (-14.920,40.139,122.284)
O3': (-15.742,36.932,121.371)
OP1: (-10.413,30.240,128.709)
OP2: (-7.888,29.832,128.691)
C3': (-9.394,30.162,123.781)
C1': (-7.725,31.742,123.194)
C5': (-10.022,31.412,125.925)
O6: (-2.165,29.581,123.311)
O4': (-8.451,32.255,124.290)
C8: (-5.959,30.953,124.931)
C2: (-4.400,30.648,120.820)
C6: (-3.221,30.036,122.854)
C5: (-4.396,30.451,123.556)
C4: (-5.428,30.919,122.791)
P: (-9.061,30.615,128.225)
C4': (-9.681,31.489,124.469)
C2': (-8.551,30.598,122.584)
O2': (-9.371,31.129,121.555)
N1: (-3.315,30.178,121.473)
N2: (-4.303,30.693,119.484)
N3: (-5.493,31.045,121.447)
N7: (-4.734,30.475,124.913)
N9: (-6.422,31.251,123.671)
O5': (-9.050,30.682,126.632)
O3': (-10.572,29.446,123.422)
OP2: (-7.888,29.832,128.691)
C3': (-9.394,30.162,123.781)
C1': (-7.725,31.742,123.194)
C5': (-10.022,31.412,125.925)
O6: (-2.165,29.581,123.311)
O4': (-8.451,32.255,124.290)
C8: (-5.959,30.953,124.931)
C2: (-4.400,30.648,120.820)
C6: (-3.221,30.036,122.854)
C5: (-4.396,30.451,123.556)
C4: (-5.428,30.919,122.791)
P: (-9.061,30.615,128.225)
C4': (-9.681,31.489,124.469)
C2': (-8.551,30.598,122.584)
O2': (-9.371,31.129,121.555)
N1: (-3.315,30.178,121.473)
N2: (-4.303,30.693,119.484)
N3: (-5.493,31.045,121.447)
N7: (-4.734,30.475,124.913)
N9: (-6.422,31.251,123.671)
O5': (-9.050,30.682,126.632)
O3': (-10.572,29.446,123.422)
Image (generated by PyMOL):