ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HOM:A35:A30

Extra

PDB:
ATOM 1 O3' U A 34 8.998 36.375 51.647 1.00100.24 O
ATOM 2 P A A 35 10.187 37.106 50.853 1.00 97.27 P
ATOM 3 OP1 A A 35 9.559 37.784 49.688 1.00 97.36 O
ATOM 4 OP2 A A 35 11.273 36.111 50.636 1.00 96.20 O
ATOM 5 O5' A A 35 10.710 38.231 51.860 1.00 93.84 O
ATOM 6 C5' A A 35 10.174 39.558 51.816 1.00 86.23 C
ATOM 7 C4' A A 35 10.797 40.422 52.892 1.00 80.41 C
ATOM 8 O4' A A 35 10.411 39.921 54.201 1.00 76.62 O
ATOM 9 C3' A A 35 12.318 40.449 52.921 1.00 78.65 C
ATOM 10 O3' A A 35 12.849 41.397 51.991 1.00 77.28 O
ATOM 11 C2' A A 35 12.602 40.813 54.376 1.00 76.93 C
ATOM 12 O2' A A 35 12.479 42.187 54.677 1.00 76.48 O
ATOM 13 C1' A A 35 11.501 40.039 55.096 1.00 73.69 C
ATOM 14 N9 A A 35 11.924 38.693 55.461 1.00 67.75 N
ATOM 15 C8 A A 35 11.573 37.514 54.868 1.00 64.57 C
ATOM 16 N7 A A 35 12.095 36.459 55.444 1.00 64.12 N
ATOM 17 C5 A A 35 12.844 36.983 56.483 1.00 60.69 C
ATOM 18 C6 A A 35 13.636 36.385 57.465 1.00 58.06 C
ATOM 19 N6 A A 35 13.794 35.078 57.588 1.00 55.66 N
ATOM 20 N1 A A 35 14.268 37.190 58.339 1.00 62.68 N
ATOM 21 C2 A A 35 14.095 38.513 58.229 1.00 65.19 C
ATOM 22 N3 A A 35 13.363 39.195 57.352 1.00 65.40 N
ATOM 23 C4 A A 35 12.757 38.359 56.497 1.00 64.13 C
ATOM 24 P C A 36 14.292 41.137 51.309 1.00 76.69 P
ATOM 25 OP1 C A 36 14.551 42.262 50.381 1.00 77.70 O
ATOM 26 OP2 C A 36 14.372 39.741 50.802 1.00 75.65 O
ATOM 27 O5' C A 36 15.311 41.285 52.522 1.00 74.24 O
TER

ATOM 1 O3' A B 29 17.661 46.915 58.203 1.00 62.40 O
ATOM 2 P G B 30 16.893 47.223 59.585 1.00 62.67 P
ATOM 3 OP1 G B 30 15.761 48.114 59.223 1.00 65.82 O
ATOM 4 OP2 G B 30 17.858 47.661 60.632 1.00 59.89 O
ATOM 5 O5' G B 30 16.270 45.815 59.992 1.00 62.46 O
ATOM 6 C5' G B 30 15.314 45.161 59.163 1.00 60.03 C
ATOM 7 C4' G B 30 15.301 43.676 59.460 1.00 62.85 C
ATOM 8 O4' G B 30 16.592 43.108 59.123 1.00 63.07 O
ATOM 9 C3' G B 30 15.054 43.292 60.911 1.00 64.42 C
ATOM 10 O3' G B 30 13.647 43.140 61.107 1.00 68.39 O
ATOM 11 C2' G B 30 15.768 41.948 61.024 1.00 63.16 C
ATOM 12 O2' G B 30 14.968 40.895 60.525 1.00 65.24 O
ATOM 13 C1' G B 30 16.957 42.136 60.077 1.00 61.59 C
ATOM 14 N9 G B 30 18.203 42.581 60.683 1.00 59.58 N
ATOM 15 C8 G B 30 18.622 43.881 60.817 1.00 57.00 C
ATOM 16 N7 G B 30 19.808 43.986 61.349 1.00 57.50 N
ATOM 17 C5 G B 30 20.196 42.675 61.590 1.00 61.47 C
ATOM 18 C6 G B 30 21.408 42.151 62.145 1.00 62.79 C
ATOM 19 O6 G B 30 22.418 42.765 62.521 1.00 62.92 O
ATOM 20 N1 G B 30 21.379 40.760 62.223 1.00 64.56 N
ATOM 21 C2 G B 30 20.338 39.968 61.805 1.00 64.69 C
ATOM 22 N2 G B 30 20.523 38.651 61.956 1.00 65.21 N
ATOM 23 N3 G B 30 19.206 40.439 61.275 1.00 62.64 N
ATOM 24 C4 G B 30 19.207 41.792 61.199 1.00 61.83 C
ATOM 25 P A B 31 12.981 43.529 62.517 1.00 72.05 P
ATOM 26 OP1 A B 31 11.590 43.013 62.478 1.00 72.25 O
ATOM 27 OP2 A B 31 13.224 44.970 62.806 1.00 72.89 O
ATOM 28 O5' A B 31 13.789 42.668 63.589 1.00 73.44 O
TER

Atoms:
OP1: (9.559,37.784,49.688)
OP2: (11.273,36.111,50.636)
C3': (12.318,40.449,52.921)
C1': (11.501,40.039,55.096)
C5': (10.174,39.558,51.816)
O4': (10.411,39.921,54.201)
C8: (11.573,37.514,54.868)
O2': (12.479,42.187,54.677)
C6: (13.636,36.385,57.465)
C5: (12.844,36.983,56.483)
C4: (12.757,38.359,56.497)
P: (10.187,37.106,50.853)
C4': (10.797,40.422,52.892)
C2': (12.602,40.813,54.376)
C2: (14.095,38.513,58.229)
N1: (14.268,37.190,58.339)
N3: (13.363,39.195,57.352)
N6: (13.794,35.078,57.588)
N7: (12.095,36.459,55.444)
N9: (11.924,38.693,55.461)
O5': (10.710,38.231,51.860)
O3': (12.849,41.397,51.991)
OP1: (15.761,48.114,59.223)
OP2: (17.858,47.661,60.632)
C3': (15.054,43.292,60.911)
C1': (16.957,42.136,60.077)
C5': (15.314,45.161,59.163)
O6: (22.418,42.765,62.521)
O4': (16.592,43.108,59.123)
C8: (18.622,43.881,60.817)
C2: (20.338,39.968,61.805)
C6: (21.408,42.151,62.145)
C5: (20.196,42.675,61.590)
C4: (19.207,41.792,61.199)
P: (16.893,47.223,59.585)
C4': (15.301,43.676,59.460)
C2': (15.768,41.948,61.024)
O2': (14.968,40.895,60.525)
N1: (21.379,40.760,62.223)
N2: (20.523,38.651,61.956)
N3: (19.206,40.439,61.275)
N7: (19.808,43.986,61.349)
N9: (18.203,42.581,60.683)
O5': (16.270,45.815,59.992)
O3': (13.647,43.140,61.107)
Image (generated by PyMOL):
PyMOL image
show in jmol