Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:C13:C18
Extra
PDB:
ATOM 1 O3' C A 12 23.120 -17.294 22.784 1.00 37.92 O
ATOM 2 P A A 13 22.210 -17.436 21.469 1.00 39.87 P
ATOM 3 OP1 A A 13 21.214 -18.506 21.719 1.00 40.74 O
ATOM 4 OP2 A A 13 23.093 -17.506 20.276 1.00 39.79 O
ATOM 5 O5' A A 13 21.403 -16.069 21.407 1.00 37.21 O
ATOM 6 C5' A A 13 20.514 -15.711 22.452 1.00 32.70 C
ATOM 7 C4' A A 13 20.093 -14.267 22.309 1.00 29.96 C
ATOM 8 O4' A A 13 21.258 -13.408 22.360 1.00 27.97 O
ATOM 9 C3' A A 13 19.411 -13.882 21.012 1.00 27.99 C
ATOM 10 O3' A A 13 18.035 -14.200 21.128 1.00 30.42 O
ATOM 11 C2' A A 13 19.617 -12.376 20.996 1.00 27.10 C
ATOM 12 O2' A A 13 18.722 -11.719 21.864 1.00 29.11 O
ATOM 13 C1' A A 13 21.019 -12.255 21.588 1.00 25.07 C
ATOM 14 N9 A A 13 22.066 -12.158 20.584 1.00 23.90 N
ATOM 15 C8 A A 13 22.877 -13.144 20.087 1.00 23.08 C
ATOM 16 N7 A A 13 23.726 -12.719 19.186 1.00 25.22 N
ATOM 17 C5 A A 13 23.449 -11.358 19.082 1.00 25.48 C
ATOM 18 C6 A A 13 23.999 -10.328 18.294 1.00 26.35 C
ATOM 19 N6 A A 13 24.979 -10.513 17.417 1.00 29.97 N
ATOM 20 N1 A A 13 23.498 -9.084 18.443 1.00 26.53 N
ATOM 21 C2 A A 13 22.513 -8.894 19.324 1.00 25.36 C
ATOM 22 N3 A A 13 21.911 -9.776 20.113 1.00 25.20 N
ATOM 23 C4 A A 13 22.433 -11.004 19.941 1.00 24.75 C
ATOM 24 P U A 14 17.163 -14.492 19.818 1.00 31.53 P
ATOM 25 OP1 U A 14 16.095 -15.434 20.217 1.00 31.01 O
ATOM 26 OP2 U A 14 18.094 -14.865 18.727 1.00 33.68 O
ATOM 27 O5' U A 14 16.515 -13.077 19.480 1.00 30.81 O
TER
ATOM 1 O3' C B 17 19.751 -3.936 15.989 1.00 18.68 O
ATOM 2 P G B 18 20.993 -4.772 16.578 1.00 20.55 P
ATOM 3 OP1 G B 18 22.191 -4.424 15.792 1.00 19.98 O
ATOM 4 OP2 G B 18 20.598 -6.185 16.712 1.00 22.78 O
ATOM 5 O5' G B 18 21.224 -4.178 18.033 1.00 19.90 O
ATOM 6 C5' G B 18 20.360 -4.494 19.114 1.00 18.77 C
ATOM 7 C4' G B 18 21.103 -4.310 20.400 1.00 18.66 C
ATOM 8 O4' G B 18 22.110 -5.313 20.507 1.00 21.59 O
ATOM 9 C3' G B 18 21.784 -2.956 20.534 1.00 19.97 C
ATOM 10 O3' G B 18 20.973 -2.323 21.513 1.00 16.83 O
ATOM 11 C2' G B 18 23.162 -3.238 21.151 1.00 21.17 C
ATOM 12 O2' G B 18 23.282 -2.782 22.484 1.00 27.63 O
ATOM 13 C1' G B 18 23.239 -4.768 21.135 1.00 21.02 C
ATOM 14 N9 G B 18 24.412 -5.440 20.602 1.00 20.60 N
ATOM 15 C8 G B 18 25.323 -5.017 19.665 1.00 18.30 C
ATOM 16 N7 G B 18 26.241 -5.913 19.415 1.00 20.42 N
ATOM 17 C5 G B 18 25.909 -6.981 20.240 1.00 20.35 C
ATOM 18 C6 G B 18 26.524 -8.246 20.412 1.00 20.65 C
ATOM 19 O6 G B 18 27.518 -8.699 19.851 1.00 23.73 O
ATOM 20 N1 G B 18 25.852 -9.017 21.354 1.00 21.57 N
ATOM 21 C2 G B 18 24.725 -8.627 22.039 1.00 20.53 C
ATOM 22 N2 G B 18 24.206 -9.511 22.904 1.00 20.32 N
ATOM 23 N3 G B 18 24.145 -7.458 21.886 1.00 19.65 N
ATOM 24 C4 G B 18 24.787 -6.693 20.978 1.00 20.49 C
ATOM 25 P A B 19 20.860 -0.740 21.598 1.00 17.02 P
ATOM 26 OP1 A B 19 20.995 -0.151 20.242 1.00 15.96 O
ATOM 27 OP2 A B 19 21.761 -0.297 22.692 1.00 17.91 O
ATOM 28 O5' A B 19 19.340 -0.588 22.038 1.00 17.27 O
TER
ATOM 2 P A A 13 22.210 -17.436 21.469 1.00 39.87 P
ATOM 3 OP1 A A 13 21.214 -18.506 21.719 1.00 40.74 O
ATOM 4 OP2 A A 13 23.093 -17.506 20.276 1.00 39.79 O
ATOM 5 O5' A A 13 21.403 -16.069 21.407 1.00 37.21 O
ATOM 6 C5' A A 13 20.514 -15.711 22.452 1.00 32.70 C
ATOM 7 C4' A A 13 20.093 -14.267 22.309 1.00 29.96 C
ATOM 8 O4' A A 13 21.258 -13.408 22.360 1.00 27.97 O
ATOM 9 C3' A A 13 19.411 -13.882 21.012 1.00 27.99 C
ATOM 10 O3' A A 13 18.035 -14.200 21.128 1.00 30.42 O
ATOM 11 C2' A A 13 19.617 -12.376 20.996 1.00 27.10 C
ATOM 12 O2' A A 13 18.722 -11.719 21.864 1.00 29.11 O
ATOM 13 C1' A A 13 21.019 -12.255 21.588 1.00 25.07 C
ATOM 14 N9 A A 13 22.066 -12.158 20.584 1.00 23.90 N
ATOM 15 C8 A A 13 22.877 -13.144 20.087 1.00 23.08 C
ATOM 16 N7 A A 13 23.726 -12.719 19.186 1.00 25.22 N
ATOM 17 C5 A A 13 23.449 -11.358 19.082 1.00 25.48 C
ATOM 18 C6 A A 13 23.999 -10.328 18.294 1.00 26.35 C
ATOM 19 N6 A A 13 24.979 -10.513 17.417 1.00 29.97 N
ATOM 20 N1 A A 13 23.498 -9.084 18.443 1.00 26.53 N
ATOM 21 C2 A A 13 22.513 -8.894 19.324 1.00 25.36 C
ATOM 22 N3 A A 13 21.911 -9.776 20.113 1.00 25.20 N
ATOM 23 C4 A A 13 22.433 -11.004 19.941 1.00 24.75 C
ATOM 24 P U A 14 17.163 -14.492 19.818 1.00 31.53 P
ATOM 25 OP1 U A 14 16.095 -15.434 20.217 1.00 31.01 O
ATOM 26 OP2 U A 14 18.094 -14.865 18.727 1.00 33.68 O
ATOM 27 O5' U A 14 16.515 -13.077 19.480 1.00 30.81 O
TER
ATOM 1 O3' C B 17 19.751 -3.936 15.989 1.00 18.68 O
ATOM 2 P G B 18 20.993 -4.772 16.578 1.00 20.55 P
ATOM 3 OP1 G B 18 22.191 -4.424 15.792 1.00 19.98 O
ATOM 4 OP2 G B 18 20.598 -6.185 16.712 1.00 22.78 O
ATOM 5 O5' G B 18 21.224 -4.178 18.033 1.00 19.90 O
ATOM 6 C5' G B 18 20.360 -4.494 19.114 1.00 18.77 C
ATOM 7 C4' G B 18 21.103 -4.310 20.400 1.00 18.66 C
ATOM 8 O4' G B 18 22.110 -5.313 20.507 1.00 21.59 O
ATOM 9 C3' G B 18 21.784 -2.956 20.534 1.00 19.97 C
ATOM 10 O3' G B 18 20.973 -2.323 21.513 1.00 16.83 O
ATOM 11 C2' G B 18 23.162 -3.238 21.151 1.00 21.17 C
ATOM 12 O2' G B 18 23.282 -2.782 22.484 1.00 27.63 O
ATOM 13 C1' G B 18 23.239 -4.768 21.135 1.00 21.02 C
ATOM 14 N9 G B 18 24.412 -5.440 20.602 1.00 20.60 N
ATOM 15 C8 G B 18 25.323 -5.017 19.665 1.00 18.30 C
ATOM 16 N7 G B 18 26.241 -5.913 19.415 1.00 20.42 N
ATOM 17 C5 G B 18 25.909 -6.981 20.240 1.00 20.35 C
ATOM 18 C6 G B 18 26.524 -8.246 20.412 1.00 20.65 C
ATOM 19 O6 G B 18 27.518 -8.699 19.851 1.00 23.73 O
ATOM 20 N1 G B 18 25.852 -9.017 21.354 1.00 21.57 N
ATOM 21 C2 G B 18 24.725 -8.627 22.039 1.00 20.53 C
ATOM 22 N2 G B 18 24.206 -9.511 22.904 1.00 20.32 N
ATOM 23 N3 G B 18 24.145 -7.458 21.886 1.00 19.65 N
ATOM 24 C4 G B 18 24.787 -6.693 20.978 1.00 20.49 C
ATOM 25 P A B 19 20.860 -0.740 21.598 1.00 17.02 P
ATOM 26 OP1 A B 19 20.995 -0.151 20.242 1.00 15.96 O
ATOM 27 OP2 A B 19 21.761 -0.297 22.692 1.00 17.91 O
ATOM 28 O5' A B 19 19.340 -0.588 22.038 1.00 17.27 O
TER
Atoms:
OP1: (21.214,-18.506,21.719)
OP2: (23.093,-17.506,20.276)
C3': (19.411,-13.882,21.012)
C1': (21.019,-12.255,21.588)
C5': (20.514,-15.711,22.452)
O4': (21.258,-13.408,22.360)
C8: (22.877,-13.144,20.087)
O2': (18.722,-11.719,21.864)
C6: (23.999,-10.328,18.294)
C5: (23.449,-11.358,19.082)
C4: (22.433,-11.004,19.941)
P: (22.210,-17.436,21.469)
C4': (20.093,-14.267,22.309)
C2': (19.617,-12.376,20.996)
C2: (22.513,-8.894,19.324)
N1: (23.498,-9.084,18.443)
N3: (21.911,-9.776,20.113)
N6: (24.979,-10.513,17.417)
N7: (23.726,-12.719,19.186)
N9: (22.066,-12.158,20.584)
O5': (21.403,-16.069,21.407)
O3': (18.035,-14.200,21.128)
OP2: (23.093,-17.506,20.276)
C3': (19.411,-13.882,21.012)
C1': (21.019,-12.255,21.588)
C5': (20.514,-15.711,22.452)
O4': (21.258,-13.408,22.360)
C8: (22.877,-13.144,20.087)
O2': (18.722,-11.719,21.864)
C6: (23.999,-10.328,18.294)
C5: (23.449,-11.358,19.082)
C4: (22.433,-11.004,19.941)
P: (22.210,-17.436,21.469)
C4': (20.093,-14.267,22.309)
C2': (19.617,-12.376,20.996)
C2: (22.513,-8.894,19.324)
N1: (23.498,-9.084,18.443)
N3: (21.911,-9.776,20.113)
N6: (24.979,-10.513,17.417)
N7: (23.726,-12.719,19.186)
N9: (22.066,-12.158,20.584)
O5': (21.403,-16.069,21.407)
O3': (18.035,-14.200,21.128)
OP1: (22.191,-4.424,15.792)
OP2: (20.598,-6.185,16.712)
C3': (21.784,-2.956,20.534)
C1': (23.239,-4.768,21.135)
C5': (20.360,-4.494,19.114)
O6: (27.518,-8.699,19.851)
O4': (22.110,-5.313,20.507)
C8: (25.323,-5.017,19.665)
C2: (24.725,-8.627,22.039)
C6: (26.524,-8.246,20.412)
C5: (25.909,-6.981,20.240)
C4: (24.787,-6.693,20.978)
P: (20.993,-4.772,16.578)
C4': (21.103,-4.310,20.400)
C2': (23.162,-3.238,21.151)
O2': (23.282,-2.782,22.484)
N1: (25.852,-9.017,21.354)
N2: (24.206,-9.511,22.904)
N3: (24.145,-7.458,21.886)
N7: (26.241,-5.913,19.415)
N9: (24.412,-5.440,20.602)
O5': (21.224,-4.178,18.033)
O3': (20.973,-2.323,21.513)
OP2: (20.598,-6.185,16.712)
C3': (21.784,-2.956,20.534)
C1': (23.239,-4.768,21.135)
C5': (20.360,-4.494,19.114)
O6: (27.518,-8.699,19.851)
O4': (22.110,-5.313,20.507)
C8: (25.323,-5.017,19.665)
C2: (24.725,-8.627,22.039)
C6: (26.524,-8.246,20.412)
C5: (25.909,-6.981,20.240)
C4: (24.787,-6.693,20.978)
P: (20.993,-4.772,16.578)
C4': (21.103,-4.310,20.400)
C2': (23.162,-3.238,21.151)
O2': (23.282,-2.782,22.484)
N1: (25.852,-9.017,21.354)
N2: (24.206,-9.511,22.904)
N3: (24.145,-7.458,21.886)
N7: (26.241,-5.913,19.415)
N9: (24.412,-5.440,20.602)
O5': (21.224,-4.178,18.033)
O3': (20.973,-2.323,21.513)
Image (generated by PyMOL):