ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1H4Q:T12:T11

Extra

PDB:
ATOM 1 O3' G A 11 -1.934 59.926 104.986 1.00 78.03 O
ATOM 2 P C A 12 -3.350 59.586 105.660 1.00 79.82 P
ATOM 3 OP1 C A 12 -3.421 58.108 105.771 1.00 76.43 O
ATOM 4 OP2 C A 12 -4.415 60.325 104.933 1.00 78.98 O
ATOM 5 O5' C A 12 -3.244 60.196 107.125 1.00 77.72 O
ATOM 6 C5' C A 12 -4.374 60.201 107.980 1.00 78.96 C
ATOM 7 C4' C A 12 -4.193 61.212 109.079 1.00 80.17 C
ATOM 8 O4' C A 12 -3.649 62.423 108.510 1.00 77.92 O
ATOM 9 C3' C A 12 -5.527 61.585 109.703 1.00 83.48 C
ATOM 10 O3' C A 12 -5.603 61.492 111.125 1.00 87.10 O
ATOM 11 C2' C A 12 -5.955 62.883 109.024 1.00 81.62 C
ATOM 12 O2' C A 12 -6.468 63.818 109.946 1.00 82.35 O
ATOM 13 C1' C A 12 -4.628 63.438 108.493 1.00 80.53 C
ATOM 14 N1 C A 12 -4.682 63.986 107.132 1.00 81.44 N
ATOM 15 C2 C A 12 -4.810 65.371 106.963 1.00 81.75 C
ATOM 16 O2 C A 12 -4.886 66.096 107.970 1.00 82.32 O
ATOM 17 N3 C A 12 -4.841 65.885 105.712 1.00 80.93 N
ATOM 18 C4 C A 12 -4.751 65.072 104.656 1.00 81.60 C
ATOM 19 N4 C A 12 -4.780 65.623 103.437 1.00 83.46 N
ATOM 20 C5 C A 12 -4.626 63.658 104.800 1.00 81.69 C
ATOM 21 C6 C A 12 -4.599 63.162 106.044 1.00 80.61 C
ATOM 22 P C A 13 -5.625 60.052 111.842 1.00 87.67 P
ATOM 23 OP1 C A 13 -5.629 60.279 113.309 1.00 87.99 O
ATOM 24 OP2 C A 13 -4.565 59.208 111.236 1.00 85.16 O
ATOM 25 O5' C A 13 -7.032 59.440 111.423 1.00 96.25 O
TER

ATOM 1 O3' A B 10 -3.265 62.614 99.705 1.00 71.86 O
ATOM 2 P G B 11 -4.109 62.622 101.076 1.00 75.07 P
ATOM 3 OP1 G B 11 -5.133 61.546 101.018 1.00 74.35 O
ATOM 4 OP2 G B 11 -4.536 64.031 101.317 1.00 71.07 O
ATOM 5 O5' G B 11 -3.037 62.236 102.191 1.00 74.33 O
ATOM 6 C5' G B 11 -2.154 61.125 102.019 1.00 71.94 C
ATOM 7 C4' G B 11 -1.106 61.128 103.109 1.00 72.23 C
ATOM 8 O4' G B 11 -0.233 62.276 102.956 1.00 70.33 O
ATOM 9 C3' G B 11 -1.664 61.241 104.516 1.00 71.41 C
ATOM 10 O3' G B 11 -1.934 59.926 104.986 1.00 78.03 O
ATOM 11 C2' G B 11 -0.505 61.865 105.288 1.00 66.68 C
ATOM 12 O2' G B 11 0.425 60.885 105.701 1.00 64.54 O
ATOM 13 C1' G B 11 0.139 62.768 104.228 1.00 64.86 C
ATOM 14 N9 G B 11 -0.225 64.180 104.280 1.00 60.76 N
ATOM 15 C8 G B 11 -1.215 64.791 103.553 1.00 59.99 C
ATOM 16 N7 G B 11 -1.312 66.072 103.790 1.00 61.25 N
ATOM 17 C5 G B 11 -0.327 66.326 104.733 1.00 57.65 C
ATOM 18 C6 G B 11 0.039 67.537 105.370 1.00 57.20 C
ATOM 19 O6 G B 11 -0.452 68.661 105.223 1.00 59.81 O
ATOM 20 N1 G B 11 1.093 67.351 106.260 1.00 53.93 N
ATOM 21 C2 G B 11 1.715 66.154 106.507 1.00 53.71 C
ATOM 22 N2 G B 11 2.714 66.189 107.401 1.00 51.61 N
ATOM 23 N3 G B 11 1.381 65.011 105.919 1.00 56.21 N
ATOM 24 C4 G B 11 0.357 65.170 105.050 1.00 58.99 C
ATOM 25 P C B 12 -3.350 59.586 105.660 1.00 79.82 P
ATOM 26 OP1 C B 12 -3.421 58.108 105.771 1.00 76.43 O
ATOM 27 OP2 C B 12 -4.415 60.325 104.933 1.00 78.98 O
ATOM 28 O5' C B 12 -3.244 60.196 107.125 1.00 77.72 O
TER

Atoms:
C2: (-4.810,65.371,106.963)
OP1: (-3.421,58.108,105.771)
OP2: (-4.415,60.325,104.933)
C4: (-4.751,65.072,104.656)
O5': (-3.244,60.196,107.125)
C3': (-5.527,61.585,109.703)
C1': (-4.628,63.438,108.493)
O4': (-3.649,62.423,108.510)
C5': (-4.374,60.201,107.980)
P: (-3.350,59.586,105.660)
O2: (-4.886,66.096,107.970)
C4': (-4.193,61.212,109.079)
C2': (-5.955,62.883,109.024)
O2': (-6.468,63.818,109.946)
N1: (-4.682,63.986,107.132)
N3: (-4.841,65.885,105.712)
N4: (-4.780,65.623,103.437)
C6: (-4.599,63.162,106.044)
C5: (-4.626,63.658,104.800)
O3': (-5.603,61.492,111.125)
OP1: (-5.133,61.546,101.018)
OP2: (-4.536,64.031,101.317)
C3': (-1.664,61.241,104.516)
C1': (0.139,62.768,104.228)
C5': (-2.154,61.125,102.019)
O6: (-0.452,68.661,105.223)
O4': (-0.233,62.276,102.956)
C8: (-1.215,64.791,103.553)
C2: (1.715,66.154,106.507)
C6: (0.039,67.537,105.370)
C5: (-0.327,66.326,104.733)
C4: (0.357,65.170,105.050)
P: (-4.109,62.622,101.076)
C4': (-1.106,61.128,103.109)
C2': (-0.505,61.865,105.288)
O2': (0.425,60.885,105.701)
N1: (1.093,67.351,106.260)
N2: (2.714,66.189,107.401)
N3: (1.381,65.011,105.919)
N7: (-1.312,66.072,103.790)
N9: (-0.225,64.180,104.280)
O5': (-3.037,62.236,102.191)
O3': (-1.934,59.926,104.986)
Image (generated by PyMOL):
PyMOL image
show in jmol