ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1IL2:C72:C71

Extra

PDB:
ATOM 1 O3' G A 71 15.017 9.549 -17.108 1.00 53.74 O
ATOM 2 P C A 72 14.262 8.148 -16.867 1.00 52.97 P
ATOM 3 OP1 C A 72 14.970 7.073 -17.616 1.00 53.81 O
ATOM 4 OP2 C A 72 12.815 8.390 -17.122 1.00 50.66 O
ATOM 5 O5' C A 72 14.448 7.887 -15.304 1.00 49.22 O
ATOM 6 C5' C A 72 15.687 7.358 -14.789 1.00 49.04 C
ATOM 7 C4' C A 72 15.615 7.238 -13.288 1.00 48.55 C
ATOM 8 O4' C A 72 15.421 8.567 -12.732 1.00 52.44 O
ATOM 9 C3' C A 72 14.445 6.425 -12.754 1.00 49.84 C
ATOM 10 O3' C A 72 14.713 5.019 -12.701 1.00 51.00 O
ATOM 11 C2' C A 72 14.237 7.015 -11.364 1.00 45.83 C
ATOM 12 O2' C A 72 15.137 6.494 -10.407 1.00 40.91 O
ATOM 13 C1' C A 72 14.562 8.490 -11.606 1.00 48.57 C
ATOM 14 N1 C A 72 13.340 9.249 -11.905 1.00 41.63 N
ATOM 15 C2 C A 72 12.592 9.753 -10.842 1.00 38.44 C
ATOM 16 O2 C A 72 13.015 9.591 -9.679 1.00 42.61 O
ATOM 17 N3 C A 72 11.437 10.409 -11.096 1.00 34.27 N
ATOM 18 C4 C A 72 11.039 10.591 -12.355 1.00 36.85 C
ATOM 19 N4 C A 72 9.900 11.250 -12.561 1.00 43.03 N
ATOM 20 C5 C A 72 11.796 10.104 -13.463 1.00 38.70 C
ATOM 21 C6 C A 72 12.930 9.444 -13.194 1.00 36.92 C
ATOM 22 P C A 73 13.518 3.967 -12.935 1.00 49.67 P
ATOM 23 OP1 C A 73 14.070 2.602 -12.812 1.00 54.71 O
ATOM 24 OP2 C A 73 12.778 4.350 -14.176 1.00 48.46 O
ATOM 25 O5' C A 73 12.541 4.196 -11.692 1.00 54.45 O
TER

ATOM 1 O3' A B 70 10.985 14.281 -16.962 1.00 44.77 O
ATOM 2 P G B 71 10.711 12.709 -16.779 1.00 43.00 P
ATOM 3 OP1 G B 71 10.155 12.179 -18.049 1.00 47.86 O
ATOM 4 OP2 G B 71 9.953 12.524 -15.515 1.00 44.37 O
ATOM 5 O5' G B 71 12.161 12.091 -16.550 1.00 44.07 O
ATOM 6 C5' G B 71 13.155 12.151 -17.582 1.00 44.89 C
ATOM 7 C4' G B 71 14.529 11.944 -16.999 1.00 46.92 C
ATOM 8 O4' G B 71 14.793 12.967 -16.005 1.00 44.49 O
ATOM 9 C3' G B 71 14.732 10.644 -16.247 1.00 50.23 C
ATOM 10 O3' G B 71 15.017 9.549 -17.108 1.00 53.74 O
ATOM 11 C2' G B 71 15.889 10.972 -15.311 1.00 48.68 C
ATOM 12 O2' G B 71 17.154 10.840 -15.924 1.00 47.60 O
ATOM 13 C1' G B 71 15.614 12.438 -14.975 1.00 45.82 C
ATOM 14 N9 G B 71 14.927 12.583 -13.690 1.00 44.37 N
ATOM 15 C8 G B 71 13.592 12.848 -13.474 1.00 41.56 C
ATOM 16 N7 G B 71 13.277 12.889 -12.206 1.00 37.23 N
ATOM 17 C5 G B 71 14.476 12.642 -11.544 1.00 37.27 C
ATOM 18 C6 G B 71 14.766 12.563 -10.146 1.00 36.22 C
ATOM 19 O6 G B 71 13.993 12.687 -9.182 1.00 31.37 O
ATOM 20 N1 G B 71 16.113 12.311 -9.918 1.00 31.75 N
ATOM 21 C2 G B 71 17.064 12.155 -10.895 1.00 36.01 C
ATOM 22 N2 G B 71 18.322 11.940 -10.466 1.00 34.19 N
ATOM 23 N3 G B 71 16.808 12.213 -12.194 1.00 35.52 N
ATOM 24 C4 G B 71 15.504 12.460 -12.444 1.00 37.10 C
ATOM 25 P C B 72 14.262 8.148 -16.867 1.00 52.97 P
ATOM 26 OP1 C B 72 14.970 7.073 -17.616 1.00 53.81 O
ATOM 27 OP2 C B 72 12.815 8.390 -17.122 1.00 50.66 O
ATOM 28 O5' C B 72 14.448 7.887 -15.304 1.00 49.22 O
TER

Atoms:
C2: (12.592,9.753,-10.842)
OP1: (14.970,7.073,-17.616)
OP2: (12.815,8.390,-17.122)
C4: (11.039,10.591,-12.355)
O5': (14.448,7.887,-15.304)
C3': (14.445,6.425,-12.754)
C1': (14.562,8.490,-11.606)
O4': (15.421,8.567,-12.732)
C5': (15.687,7.358,-14.789)
P: (14.262,8.148,-16.867)
O2: (13.015,9.591,-9.679)
C4': (15.615,7.238,-13.288)
C2': (14.237,7.015,-11.364)
O2': (15.137,6.494,-10.407)
N1: (13.340,9.249,-11.905)
N3: (11.437,10.409,-11.096)
N4: (9.900,11.250,-12.561)
C6: (12.930,9.444,-13.194)
C5: (11.796,10.104,-13.463)
O3': (14.713,5.019,-12.701)
OP1: (10.155,12.179,-18.049)
OP2: (9.953,12.524,-15.515)
C3': (14.732,10.644,-16.247)
C1': (15.614,12.438,-14.975)
C5': (13.155,12.151,-17.582)
O6: (13.993,12.687,-9.182)
O4': (14.793,12.967,-16.005)
C8: (13.592,12.848,-13.474)
C2: (17.064,12.155,-10.895)
C6: (14.766,12.563,-10.146)
C5: (14.476,12.642,-11.544)
C4: (15.504,12.460,-12.444)
P: (10.711,12.709,-16.779)
C4': (14.529,11.944,-16.999)
C2': (15.889,10.972,-15.311)
O2': (17.154,10.840,-15.924)
N1: (16.113,12.311,-9.918)
N2: (18.322,11.940,-10.466)
N3: (16.808,12.213,-12.194)
N7: (13.277,12.889,-12.206)
N9: (14.927,12.583,-13.690)
O5': (12.161,12.091,-16.550)
O3': (15.017,9.549,-17.108)
Image (generated by PyMOL):
PyMOL image
show in jmol