Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2599:A2557
Extra
PDB:
ATOM 1 O3' C A2598 59.185 161.548 124.923 1.00 41.59 O
ATOM 2 P C A2599 59.394 160.417 126.046 1.00 41.07 P
ATOM 3 OP1 C A2599 58.193 159.553 125.988 1.00 42.03 O
ATOM 4 OP2 C A2599 59.801 160.999 127.336 1.00 41.84 O
ATOM 5 O5' C A2599 60.642 159.586 125.523 1.00 42.49 O
ATOM 6 C5' C A2599 61.473 158.843 126.434 1.00 44.47 C
ATOM 7 C4' C A2599 62.914 159.257 126.258 1.00 45.97 C
ATOM 8 O4' C A2599 63.018 160.692 126.408 1.00 47.08 O
ATOM 9 C3' C A2599 63.898 158.710 127.281 1.00 46.25 C
ATOM 10 O3' C A2599 64.315 157.391 126.872 1.00 46.10 O
ATOM 11 C2' C A2599 65.053 159.709 127.175 1.00 47.47 C
ATOM 12 O2' C A2599 65.872 159.404 126.069 1.00 47.85 O
ATOM 13 C1' C A2599 64.323 161.020 126.837 1.00 48.69 C
ATOM 14 N1 C A2599 64.254 162.075 127.879 1.00 50.93 N
ATOM 15 C2 C A2599 65.438 162.732 128.242 1.00 52.47 C
ATOM 16 O2 C A2599 66.494 162.438 127.659 1.00 52.74 O
ATOM 17 N3 C A2599 65.403 163.669 129.214 1.00 53.63 N
ATOM 18 C4 C A2599 64.250 163.970 129.809 1.00 54.68 C
ATOM 19 N4 C A2599 64.278 164.879 130.789 1.00 57.19 N
ATOM 20 C5 C A2599 63.021 163.346 129.436 1.00 53.66 C
ATOM 21 C6 C A2599 63.070 162.410 128.482 1.00 51.93 C
ATOM 22 P A A2600 64.232 156.135 127.889 1.00 45.75 P
ATOM 23 OP1 A A2600 64.179 154.864 127.129 1.00 45.99 O
ATOM 24 OP2 A A2600 63.198 156.402 128.911 1.00 46.85 O
ATOM 25 O5' A A2600 65.652 156.160 128.591 1.00 45.90 O
TER
ATOM 1 O3' C B2556 55.478 163.361 134.457 1.00 46.45 O
ATOM 2 P C B2557 55.903 164.532 133.446 1.00 48.33 P
ATOM 3 OP1 C B2557 54.765 165.476 133.386 1.00 49.65 O
ATOM 4 OP2 C B2557 56.436 163.954 132.198 1.00 47.37 O
ATOM 5 O5' C B2557 57.123 165.240 134.174 1.00 49.31 O
ATOM 6 C5' C B2557 58.387 164.608 134.160 1.00 49.15 C
ATOM 7 C4' C B2557 59.413 165.435 134.867 1.00 49.10 C
ATOM 8 O4' C B2557 60.566 164.594 135.053 1.00 49.59 O
ATOM 9 C3' C B2557 59.963 166.624 134.106 1.00 49.85 C
ATOM 10 O3' C B2557 60.681 167.352 135.103 1.00 51.56 O
ATOM 11 C2' C B2557 60.895 165.921 133.121 1.00 49.97 C
ATOM 12 O2' C B2557 61.913 166.707 132.538 1.00 49.18 O
ATOM 13 C1' C B2557 61.491 164.831 134.013 1.00 50.53 C
ATOM 14 N1 C B2557 61.688 163.562 133.313 1.00 51.56 N
ATOM 15 C2 C B2557 62.948 162.973 133.333 1.00 51.05 C
ATOM 16 O2 C B2557 63.858 163.527 133.944 1.00 50.21 O
ATOM 17 N3 C B2557 63.142 161.813 132.694 1.00 52.64 N
ATOM 18 C4 C B2557 62.129 161.229 132.053 1.00 54.62 C
ATOM 19 N4 C B2557 62.361 160.067 131.439 1.00 56.03 N
ATOM 20 C5 C B2557 60.829 161.807 132.015 1.00 54.14 C
ATOM 21 C6 C B2557 60.654 162.963 132.654 1.00 53.04 C
ATOM 22 P A B2558 60.724 168.961 135.096 1.00 52.97 P
ATOM 23 OP1 A B2558 59.355 169.543 135.094 1.00 50.24 O
ATOM 24 OP2 A B2558 61.711 169.420 134.101 1.00 50.96 O
ATOM 25 O5' A B2558 61.359 169.277 136.515 1.00 52.46 O
TER
ATOM 2 P C A2599 59.394 160.417 126.046 1.00 41.07 P
ATOM 3 OP1 C A2599 58.193 159.553 125.988 1.00 42.03 O
ATOM 4 OP2 C A2599 59.801 160.999 127.336 1.00 41.84 O
ATOM 5 O5' C A2599 60.642 159.586 125.523 1.00 42.49 O
ATOM 6 C5' C A2599 61.473 158.843 126.434 1.00 44.47 C
ATOM 7 C4' C A2599 62.914 159.257 126.258 1.00 45.97 C
ATOM 8 O4' C A2599 63.018 160.692 126.408 1.00 47.08 O
ATOM 9 C3' C A2599 63.898 158.710 127.281 1.00 46.25 C
ATOM 10 O3' C A2599 64.315 157.391 126.872 1.00 46.10 O
ATOM 11 C2' C A2599 65.053 159.709 127.175 1.00 47.47 C
ATOM 12 O2' C A2599 65.872 159.404 126.069 1.00 47.85 O
ATOM 13 C1' C A2599 64.323 161.020 126.837 1.00 48.69 C
ATOM 14 N1 C A2599 64.254 162.075 127.879 1.00 50.93 N
ATOM 15 C2 C A2599 65.438 162.732 128.242 1.00 52.47 C
ATOM 16 O2 C A2599 66.494 162.438 127.659 1.00 52.74 O
ATOM 17 N3 C A2599 65.403 163.669 129.214 1.00 53.63 N
ATOM 18 C4 C A2599 64.250 163.970 129.809 1.00 54.68 C
ATOM 19 N4 C A2599 64.278 164.879 130.789 1.00 57.19 N
ATOM 20 C5 C A2599 63.021 163.346 129.436 1.00 53.66 C
ATOM 21 C6 C A2599 63.070 162.410 128.482 1.00 51.93 C
ATOM 22 P A A2600 64.232 156.135 127.889 1.00 45.75 P
ATOM 23 OP1 A A2600 64.179 154.864 127.129 1.00 45.99 O
ATOM 24 OP2 A A2600 63.198 156.402 128.911 1.00 46.85 O
ATOM 25 O5' A A2600 65.652 156.160 128.591 1.00 45.90 O
TER
ATOM 1 O3' C B2556 55.478 163.361 134.457 1.00 46.45 O
ATOM 2 P C B2557 55.903 164.532 133.446 1.00 48.33 P
ATOM 3 OP1 C B2557 54.765 165.476 133.386 1.00 49.65 O
ATOM 4 OP2 C B2557 56.436 163.954 132.198 1.00 47.37 O
ATOM 5 O5' C B2557 57.123 165.240 134.174 1.00 49.31 O
ATOM 6 C5' C B2557 58.387 164.608 134.160 1.00 49.15 C
ATOM 7 C4' C B2557 59.413 165.435 134.867 1.00 49.10 C
ATOM 8 O4' C B2557 60.566 164.594 135.053 1.00 49.59 O
ATOM 9 C3' C B2557 59.963 166.624 134.106 1.00 49.85 C
ATOM 10 O3' C B2557 60.681 167.352 135.103 1.00 51.56 O
ATOM 11 C2' C B2557 60.895 165.921 133.121 1.00 49.97 C
ATOM 12 O2' C B2557 61.913 166.707 132.538 1.00 49.18 O
ATOM 13 C1' C B2557 61.491 164.831 134.013 1.00 50.53 C
ATOM 14 N1 C B2557 61.688 163.562 133.313 1.00 51.56 N
ATOM 15 C2 C B2557 62.948 162.973 133.333 1.00 51.05 C
ATOM 16 O2 C B2557 63.858 163.527 133.944 1.00 50.21 O
ATOM 17 N3 C B2557 63.142 161.813 132.694 1.00 52.64 N
ATOM 18 C4 C B2557 62.129 161.229 132.053 1.00 54.62 C
ATOM 19 N4 C B2557 62.361 160.067 131.439 1.00 56.03 N
ATOM 20 C5 C B2557 60.829 161.807 132.015 1.00 54.14 C
ATOM 21 C6 C B2557 60.654 162.963 132.654 1.00 53.04 C
ATOM 22 P A B2558 60.724 168.961 135.096 1.00 52.97 P
ATOM 23 OP1 A B2558 59.355 169.543 135.094 1.00 50.24 O
ATOM 24 OP2 A B2558 61.711 169.420 134.101 1.00 50.96 O
ATOM 25 O5' A B2558 61.359 169.277 136.515 1.00 52.46 O
TER
Atoms:
C2: (65.438,162.732,128.242)
OP1: (58.193,159.553,125.988)
OP2: (59.801,160.999,127.336)
C4: (64.250,163.970,129.809)
O5': (60.642,159.586,125.523)
C3': (63.898,158.710,127.281)
C1': (64.323,161.020,126.837)
O4': (63.018,160.692,126.408)
C5': (61.473,158.843,126.434)
P: (59.394,160.417,126.046)
O2: (66.494,162.438,127.659)
C4': (62.914,159.257,126.258)
C2': (65.053,159.709,127.175)
O2': (65.872,159.404,126.069)
N1: (64.254,162.075,127.879)
N3: (65.403,163.669,129.214)
N4: (64.278,164.879,130.789)
C6: (63.070,162.410,128.482)
C5: (63.021,163.346,129.436)
O3': (64.315,157.391,126.872)
OP1: (58.193,159.553,125.988)
OP2: (59.801,160.999,127.336)
C4: (64.250,163.970,129.809)
O5': (60.642,159.586,125.523)
C3': (63.898,158.710,127.281)
C1': (64.323,161.020,126.837)
O4': (63.018,160.692,126.408)
C5': (61.473,158.843,126.434)
P: (59.394,160.417,126.046)
O2: (66.494,162.438,127.659)
C4': (62.914,159.257,126.258)
C2': (65.053,159.709,127.175)
O2': (65.872,159.404,126.069)
N1: (64.254,162.075,127.879)
N3: (65.403,163.669,129.214)
N4: (64.278,164.879,130.789)
C6: (63.070,162.410,128.482)
C5: (63.021,163.346,129.436)
O3': (64.315,157.391,126.872)
C2: (62.948,162.973,133.333)
OP1: (54.765,165.476,133.386)
OP2: (56.436,163.954,132.198)
C4: (62.129,161.229,132.053)
O5': (57.123,165.240,134.174)
C3': (59.963,166.624,134.106)
C1': (61.491,164.831,134.013)
O4': (60.566,164.594,135.053)
C5': (58.387,164.608,134.160)
P: (55.903,164.532,133.446)
O2: (63.858,163.527,133.944)
C4': (59.413,165.435,134.867)
C2': (60.895,165.921,133.121)
O2': (61.913,166.707,132.538)
N1: (61.688,163.562,133.313)
N3: (63.142,161.813,132.694)
N4: (62.361,160.067,131.439)
C6: (60.654,162.963,132.654)
C5: (60.829,161.807,132.015)
O3': (60.681,167.352,135.103)
OP1: (54.765,165.476,133.386)
OP2: (56.436,163.954,132.198)
C4: (62.129,161.229,132.053)
O5': (57.123,165.240,134.174)
C3': (59.963,166.624,134.106)
C1': (61.491,164.831,134.013)
O4': (60.566,164.594,135.053)
C5': (58.387,164.608,134.160)
P: (55.903,164.532,133.446)
O2: (63.858,163.527,133.944)
C4': (59.413,165.435,134.867)
C2': (60.895,165.921,133.121)
O2': (61.913,166.707,132.538)
N1: (61.688,163.562,133.313)
N3: (63.142,161.813,132.694)
N4: (62.361,160.067,131.439)
C6: (60.654,162.963,132.654)
C5: (60.829,161.807,132.015)
O3': (60.681,167.352,135.103)
Image (generated by PyMOL):