ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NUV:E9:E8

Extra

PDB:
ATOM 1 O3' G A 8 13.449 15.510 14.039 1.00 26.10 O
ATOM 2 P C A 9 13.051 14.660 12.743 1.00 24.48 P
ATOM 3 OP1 C A 9 14.141 13.661 12.575 1.00 28.24 O
ATOM 4 OP2 C A 9 12.743 15.589 11.631 1.00 24.95 O
ATOM 5 O5' C A 9 11.726 13.895 13.161 1.00 20.73 O
ATOM 6 C5' C A 9 11.762 12.760 14.023 1.00 23.84 C
ATOM 7 C4' C A 9 10.395 12.135 14.076 1.00 27.43 C
ATOM 8 O4' C A 9 9.501 12.969 14.863 1.00 26.17 O
ATOM 9 C3' C A 9 9.740 12.057 12.708 1.00 24.42 C
ATOM 10 O3' C A 9 10.158 10.897 12.003 1.00 28.74 O
ATOM 11 C2' C A 9 8.262 12.059 13.058 1.00 26.73 C
ATOM 12 O2' C A 9 7.834 10.789 13.510 1.00 28.28 O
ATOM 13 C1' C A 9 8.238 13.061 14.218 1.00 27.10 C
ATOM 14 N1 C A 9 8.004 14.474 13.816 1.00 23.74 N
ATOM 15 C2 C A 9 6.773 14.820 13.218 1.00 22.92 C
ATOM 16 O2 C A 9 5.918 13.941 13.046 1.00 22.53 O
ATOM 17 N3 C A 9 6.550 16.108 12.851 1.00 20.43 N
ATOM 18 C4 C A 9 7.485 17.038 13.068 1.00 23.61 C
ATOM 19 N4 C A 9 7.212 18.302 12.700 1.00 21.62 N
ATOM 20 C5 C A 9 8.741 16.718 13.673 1.00 23.72 C
ATOM 21 C6 C A 9 8.956 15.438 14.025 1.00 25.35 C
ATOM 22 P C A 10 10.228 10.920 10.397 1.00 29.05 P
ATOM 23 OP1 C A 10 10.865 9.650 9.970 1.00 35.03 O
ATOM 24 OP2 C A 10 10.779 12.210 9.913 1.00 30.84 O
ATOM 25 O5' C A 10 8.697 10.886 9.972 1.00 29.07 O
TER

ATOM 1 O3' A B 7 11.097 21.651 14.559 1.00 20.88 O
ATOM 2 P G B 8 10.238 20.289 14.579 1.00 20.38 P
ATOM 3 OP1 G B 8 9.523 20.244 13.285 1.00 19.33 O
ATOM 4 OP2 G B 8 9.463 20.241 15.852 1.00 20.34 O
ATOM 5 O5' G B 8 11.311 19.101 14.656 1.00 25.57 O
ATOM 6 C5' G B 8 12.426 18.972 13.746 1.00 23.59 C
ATOM 7 C4' G B 8 13.371 17.908 14.285 1.00 25.00 C
ATOM 8 O4' G B 8 13.921 18.335 15.559 1.00 22.09 O
ATOM 9 C3' G B 8 12.629 16.584 14.523 1.00 22.41 C
ATOM 10 O3' G B 8 13.449 15.510 14.039 1.00 26.10 O
ATOM 11 C2' G B 8 12.603 16.438 16.042 1.00 20.68 C
ATOM 12 O2' G B 8 12.610 15.154 16.608 1.00 22.51 O
ATOM 13 C1' G B 8 13.829 17.252 16.443 1.00 19.50 C
ATOM 14 N9 G B 8 13.916 17.662 17.836 1.00 20.05 N
ATOM 15 C8 G B 8 14.876 17.236 18.721 1.00 20.56 C
ATOM 16 N7 G B 8 14.659 17.629 19.944 1.00 18.84 N
ATOM 17 C5 G B 8 13.501 18.389 19.857 1.00 20.20 C
ATOM 18 C6 G B 8 12.782 19.056 20.865 1.00 18.40 C
ATOM 19 O6 G B 8 13.010 19.079 22.085 1.00 19.43 O
ATOM 20 N1 G B 8 11.682 19.731 20.346 1.00 17.41 N
ATOM 21 C2 G B 8 11.309 19.738 19.027 1.00 18.22 C
ATOM 22 N2 G B 8 10.199 20.428 18.741 1.00 17.84 N
ATOM 23 N3 G B 8 11.971 19.107 18.068 1.00 19.12 N
ATOM 24 C4 G B 8 13.049 18.451 18.554 1.00 20.09 C
ATOM 25 P C B 9 13.051 14.660 12.743 1.00 24.48 P
ATOM 26 OP1 C B 9 14.141 13.661 12.575 1.00 28.24 O
ATOM 27 OP2 C B 9 12.743 15.589 11.631 1.00 24.95 O
ATOM 28 O5' C B 9 11.726 13.895 13.161 1.00 20.73 O
TER

Atoms:
C2: (6.773,14.820,13.218)
OP1: (14.141,13.661,12.575)
OP2: (12.743,15.589,11.631)
C4: (7.485,17.038,13.068)
O5': (11.726,13.895,13.161)
C3': (9.740,12.057,12.708)
C1': (8.238,13.061,14.218)
O4': (9.501,12.969,14.863)
C5': (11.762,12.760,14.023)
P: (13.051,14.660,12.743)
O2: (5.918,13.941,13.046)
C4': (10.395,12.135,14.076)
C2': (8.262,12.059,13.058)
O2': (7.834,10.789,13.510)
N1: (8.004,14.474,13.816)
N3: (6.550,16.108,12.851)
N4: (7.212,18.302,12.700)
C6: (8.956,15.438,14.025)
C5: (8.741,16.718,13.673)
O3': (10.158,10.897,12.003)
OP1: (9.523,20.244,13.285)
OP2: (9.463,20.241,15.852)
C3': (12.629,16.584,14.523)
C1': (13.829,17.252,16.443)
C5': (12.426,18.972,13.746)
O6: (13.010,19.079,22.085)
O4': (13.921,18.335,15.559)
C8: (14.876,17.236,18.721)
C2: (11.309,19.738,19.027)
C6: (12.782,19.056,20.865)
C5: (13.501,18.389,19.857)
C4: (13.049,18.451,18.554)
P: (10.238,20.289,14.579)
C4': (13.371,17.908,14.285)
C2': (12.603,16.438,16.042)
O2': (12.610,15.154,16.608)
N1: (11.682,19.731,20.346)
N2: (10.199,20.428,18.741)
N3: (11.971,19.107,18.068)
N7: (14.659,17.629,19.944)
N9: (13.916,17.662,17.836)
O5': (11.311,19.101,14.656)
O3': (13.449,15.510,14.039)
Image (generated by PyMOL):
PyMOL image
show in jmol