Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D12:D9
Extra
PDB:
ATOM 1 O3' C A 11 -0.893 -19.290 26.281 1.00 50.96 O
ATOM 2 P C A 12 0.281 -19.812 27.242 1.00 51.43 P
ATOM 3 OP1 C A 12 0.720 -21.130 26.706 1.00 51.30 O
ATOM 4 OP2 C A 12 -0.166 -19.705 28.656 1.00 50.76 O
ATOM 5 O5' C A 12 1.458 -18.764 27.004 1.00 49.05 O
ATOM 6 C5' C A 12 2.062 -18.646 25.725 1.00 41.63 C
ATOM 7 C4' C A 12 2.826 -17.347 25.610 1.00 38.41 C
ATOM 8 O4' C A 12 1.925 -16.221 25.803 1.00 36.21 O
ATOM 9 C3' C A 12 3.912 -17.076 26.634 1.00 36.65 C
ATOM 10 O3' C A 12 5.096 -17.842 26.395 1.00 33.23 O
ATOM 11 C2' C A 12 4.104 -15.571 26.450 1.00 35.87 C
ATOM 12 O2' C A 12 4.773 -15.215 25.255 1.00 36.32 O
ATOM 13 C1' C A 12 2.655 -15.113 26.310 1.00 34.45 C
ATOM 14 N1 C A 12 2.074 -14.696 27.599 1.00 32.08 N
ATOM 15 C2 C A 12 2.503 -13.489 28.154 1.00 29.61 C
ATOM 16 O2 C A 12 3.361 -12.831 27.551 1.00 31.40 O
ATOM 17 N3 C A 12 1.981 -13.073 29.331 1.00 27.76 N
ATOM 18 C4 C A 12 1.073 -13.820 29.959 1.00 25.86 C
ATOM 19 N4 C A 12 0.598 -13.373 31.122 1.00 24.60 N
ATOM 20 C5 C A 12 0.618 -15.062 29.421 1.00 26.73 C
ATOM 21 C6 C A 12 1.138 -15.458 28.247 1.00 29.29 C
ATOM 22 P A A 13 5.982 -18.344 27.647 1.00 32.22 P
ATOM 23 OP1 A A 13 6.957 -19.360 27.181 1.00 33.29 O
ATOM 24 OP2 A A 13 5.071 -18.663 28.777 1.00 31.95 O
ATOM 25 O5' A A 13 6.811 -17.054 28.080 1.00 32.17 O
TER
ATOM 1 O3' A B 8 -2.838 -8.102 35.977 1.00 62.72 O
ATOM 2 P C B 9 -4.423 -8.472 35.919 1.00 69.80 P
ATOM 3 OP1 C B 9 -4.964 -8.289 34.540 1.00 69.66 O
ATOM 4 OP2 C B 9 -5.103 -7.809 37.067 1.00 69.04 O
ATOM 5 O5' C B 9 -4.462 -10.046 36.197 1.00 73.71 O
ATOM 6 C5' C B 9 -3.292 -10.758 36.619 1.00 82.07 C
ATOM 7 C4' C B 9 -2.706 -11.553 35.463 1.00 86.91 C
ATOM 8 O4' C B 9 -1.437 -12.143 35.872 1.00 89.16 O
ATOM 9 C3' C B 9 -3.515 -12.745 34.967 1.00 88.67 C
ATOM 10 O3' C B 9 -4.558 -12.364 34.076 1.00 88.54 O
ATOM 11 C2' C B 9 -2.446 -13.586 34.274 1.00 90.32 C
ATOM 12 O2' C B 9 -2.127 -13.142 32.966 1.00 91.00 O
ATOM 13 C1' C B 9 -1.256 -13.394 35.221 1.00 91.50 C
ATOM 14 N1 C B 9 -1.220 -14.451 36.246 1.00 94.17 N
ATOM 15 C2 C B 9 -0.409 -15.575 36.030 1.00 95.57 C
ATOM 16 O2 C B 9 0.297 -15.621 35.006 1.00 95.26 O
ATOM 17 N3 C B 9 -0.416 -16.579 36.944 1.00 97.02 N
ATOM 18 C4 C B 9 -1.183 -16.485 38.036 1.00 96.96 C
ATOM 19 N4 C B 9 -1.169 -17.504 38.904 1.00 96.90 N
ATOM 20 C5 C B 9 -2.000 -15.342 38.287 1.00 96.51 C
ATOM 21 C6 C B 9 -1.984 -14.357 37.378 1.00 95.24 C
ATOM 22 P C B 10 -5.863 -13.296 33.940 1.00 87.99 P
ATOM 23 OP1 C B 10 -7.024 -12.425 33.612 1.00 87.31 O
ATOM 24 OP2 C B 10 -5.912 -14.169 35.147 1.00 88.05 O
ATOM 25 O5' C B 10 -5.555 -14.224 32.680 1.00 85.09 O
TER
ATOM 2 P C A 12 0.281 -19.812 27.242 1.00 51.43 P
ATOM 3 OP1 C A 12 0.720 -21.130 26.706 1.00 51.30 O
ATOM 4 OP2 C A 12 -0.166 -19.705 28.656 1.00 50.76 O
ATOM 5 O5' C A 12 1.458 -18.764 27.004 1.00 49.05 O
ATOM 6 C5' C A 12 2.062 -18.646 25.725 1.00 41.63 C
ATOM 7 C4' C A 12 2.826 -17.347 25.610 1.00 38.41 C
ATOM 8 O4' C A 12 1.925 -16.221 25.803 1.00 36.21 O
ATOM 9 C3' C A 12 3.912 -17.076 26.634 1.00 36.65 C
ATOM 10 O3' C A 12 5.096 -17.842 26.395 1.00 33.23 O
ATOM 11 C2' C A 12 4.104 -15.571 26.450 1.00 35.87 C
ATOM 12 O2' C A 12 4.773 -15.215 25.255 1.00 36.32 O
ATOM 13 C1' C A 12 2.655 -15.113 26.310 1.00 34.45 C
ATOM 14 N1 C A 12 2.074 -14.696 27.599 1.00 32.08 N
ATOM 15 C2 C A 12 2.503 -13.489 28.154 1.00 29.61 C
ATOM 16 O2 C A 12 3.361 -12.831 27.551 1.00 31.40 O
ATOM 17 N3 C A 12 1.981 -13.073 29.331 1.00 27.76 N
ATOM 18 C4 C A 12 1.073 -13.820 29.959 1.00 25.86 C
ATOM 19 N4 C A 12 0.598 -13.373 31.122 1.00 24.60 N
ATOM 20 C5 C A 12 0.618 -15.062 29.421 1.00 26.73 C
ATOM 21 C6 C A 12 1.138 -15.458 28.247 1.00 29.29 C
ATOM 22 P A A 13 5.982 -18.344 27.647 1.00 32.22 P
ATOM 23 OP1 A A 13 6.957 -19.360 27.181 1.00 33.29 O
ATOM 24 OP2 A A 13 5.071 -18.663 28.777 1.00 31.95 O
ATOM 25 O5' A A 13 6.811 -17.054 28.080 1.00 32.17 O
TER
ATOM 1 O3' A B 8 -2.838 -8.102 35.977 1.00 62.72 O
ATOM 2 P C B 9 -4.423 -8.472 35.919 1.00 69.80 P
ATOM 3 OP1 C B 9 -4.964 -8.289 34.540 1.00 69.66 O
ATOM 4 OP2 C B 9 -5.103 -7.809 37.067 1.00 69.04 O
ATOM 5 O5' C B 9 -4.462 -10.046 36.197 1.00 73.71 O
ATOM 6 C5' C B 9 -3.292 -10.758 36.619 1.00 82.07 C
ATOM 7 C4' C B 9 -2.706 -11.553 35.463 1.00 86.91 C
ATOM 8 O4' C B 9 -1.437 -12.143 35.872 1.00 89.16 O
ATOM 9 C3' C B 9 -3.515 -12.745 34.967 1.00 88.67 C
ATOM 10 O3' C B 9 -4.558 -12.364 34.076 1.00 88.54 O
ATOM 11 C2' C B 9 -2.446 -13.586 34.274 1.00 90.32 C
ATOM 12 O2' C B 9 -2.127 -13.142 32.966 1.00 91.00 O
ATOM 13 C1' C B 9 -1.256 -13.394 35.221 1.00 91.50 C
ATOM 14 N1 C B 9 -1.220 -14.451 36.246 1.00 94.17 N
ATOM 15 C2 C B 9 -0.409 -15.575 36.030 1.00 95.57 C
ATOM 16 O2 C B 9 0.297 -15.621 35.006 1.00 95.26 O
ATOM 17 N3 C B 9 -0.416 -16.579 36.944 1.00 97.02 N
ATOM 18 C4 C B 9 -1.183 -16.485 38.036 1.00 96.96 C
ATOM 19 N4 C B 9 -1.169 -17.504 38.904 1.00 96.90 N
ATOM 20 C5 C B 9 -2.000 -15.342 38.287 1.00 96.51 C
ATOM 21 C6 C B 9 -1.984 -14.357 37.378 1.00 95.24 C
ATOM 22 P C B 10 -5.863 -13.296 33.940 1.00 87.99 P
ATOM 23 OP1 C B 10 -7.024 -12.425 33.612 1.00 87.31 O
ATOM 24 OP2 C B 10 -5.912 -14.169 35.147 1.00 88.05 O
ATOM 25 O5' C B 10 -5.555 -14.224 32.680 1.00 85.09 O
TER
Atoms:
C2: (2.503,-13.489,28.154)
OP1: (0.720,-21.130,26.706)
OP2: (-0.166,-19.705,28.656)
C4: (1.073,-13.820,29.959)
O5': (1.458,-18.764,27.004)
C3': (3.912,-17.076,26.634)
C1': (2.655,-15.113,26.310)
O4': (1.925,-16.221,25.803)
C5': (2.062,-18.646,25.725)
P: (0.281,-19.812,27.242)
O2: (3.361,-12.831,27.551)
C4': (2.826,-17.347,25.610)
C2': (4.104,-15.571,26.450)
O2': (4.773,-15.215,25.255)
N1: (2.074,-14.696,27.599)
N3: (1.981,-13.073,29.331)
N4: (0.598,-13.373,31.122)
C6: (1.138,-15.458,28.247)
C5: (0.618,-15.062,29.421)
O3': (5.096,-17.842,26.395)
OP1: (0.720,-21.130,26.706)
OP2: (-0.166,-19.705,28.656)
C4: (1.073,-13.820,29.959)
O5': (1.458,-18.764,27.004)
C3': (3.912,-17.076,26.634)
C1': (2.655,-15.113,26.310)
O4': (1.925,-16.221,25.803)
C5': (2.062,-18.646,25.725)
P: (0.281,-19.812,27.242)
O2: (3.361,-12.831,27.551)
C4': (2.826,-17.347,25.610)
C2': (4.104,-15.571,26.450)
O2': (4.773,-15.215,25.255)
N1: (2.074,-14.696,27.599)
N3: (1.981,-13.073,29.331)
N4: (0.598,-13.373,31.122)
C6: (1.138,-15.458,28.247)
C5: (0.618,-15.062,29.421)
O3': (5.096,-17.842,26.395)
C2: (-0.409,-15.575,36.030)
OP1: (-4.964,-8.289,34.540)
OP2: (-5.103,-7.809,37.067)
C4: (-1.183,-16.485,38.036)
O5': (-4.462,-10.046,36.197)
C3': (-3.515,-12.745,34.967)
C1': (-1.256,-13.394,35.221)
O4': (-1.437,-12.143,35.872)
C5': (-3.292,-10.758,36.619)
P: (-4.423,-8.472,35.919)
O2: (0.297,-15.621,35.006)
C4': (-2.706,-11.553,35.463)
C2': (-2.446,-13.586,34.274)
O2': (-2.127,-13.142,32.966)
N1: (-1.220,-14.451,36.246)
N3: (-0.416,-16.579,36.944)
N4: (-1.169,-17.504,38.904)
C6: (-1.984,-14.357,37.378)
C5: (-2.000,-15.342,38.287)
O3': (-4.558,-12.364,34.076)
OP1: (-4.964,-8.289,34.540)
OP2: (-5.103,-7.809,37.067)
C4: (-1.183,-16.485,38.036)
O5': (-4.462,-10.046,36.197)
C3': (-3.515,-12.745,34.967)
C1': (-1.256,-13.394,35.221)
O4': (-1.437,-12.143,35.872)
C5': (-3.292,-10.758,36.619)
P: (-4.423,-8.472,35.919)
O2: (0.297,-15.621,35.006)
C4': (-2.706,-11.553,35.463)
C2': (-2.446,-13.586,34.274)
O2': (-2.127,-13.142,32.966)
N1: (-1.220,-14.451,36.246)
N3: (-0.416,-16.579,36.944)
N4: (-1.169,-17.504,38.904)
C6: (-1.984,-14.357,37.378)
C5: (-2.000,-15.342,38.287)
O3': (-4.558,-12.364,34.076)
Image (generated by PyMOL):