Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01398:01397
Extra
PDB:
ATOM 1 O3' G A1397 60.096 167.542 67.742 1.00 39.03 O
ATOM 2 P C A1398 58.970 167.399 66.617 1.00 37.97 P
ATOM 3 OP1 C A1398 59.369 166.249 65.770 1.00 38.76 O
ATOM 4 OP2 C A1398 58.761 168.719 65.995 1.00 40.54 O
ATOM 5 O5' C A1398 57.663 167.001 67.429 1.00 38.81 O
ATOM 6 C5' C A1398 57.457 165.650 67.892 1.00 38.97 C
ATOM 7 C4' C A1398 56.022 165.465 68.309 1.00 37.74 C
ATOM 8 O4' C A1398 55.719 166.398 69.376 1.00 37.14 O
ATOM 9 C3' C A1398 55.019 165.792 67.220 1.00 39.74 C
ATOM 10 O3' C A1398 54.791 164.670 66.387 1.00 43.73 O
ATOM 11 C2' C A1398 53.792 166.206 68.012 1.00 39.30 C
ATOM 12 O2' C A1398 53.076 165.095 68.514 1.00 37.57 O
ATOM 13 C1' C A1398 54.442 166.974 69.166 1.00 38.01 C
ATOM 14 N1 C A1398 54.639 168.412 68.894 1.00 37.81 N
ATOM 15 C2 C A1398 53.534 169.267 68.904 1.00 36.63 C
ATOM 16 O2 C A1398 52.410 168.792 69.106 1.00 37.69 O
ATOM 17 N3 C A1398 53.721 170.590 68.689 1.00 35.99 N
ATOM 18 C4 C A1398 54.949 171.066 68.465 1.00 37.34 C
ATOM 19 N4 C A1398 55.092 172.379 68.288 1.00 37.30 N
ATOM 20 C5 C A1398 56.089 170.216 68.423 1.00 39.13 C
ATOM 21 C6 C A1398 55.892 168.910 68.643 1.00 39.73 C
ATOM 22 P U A1399 54.714 164.866 64.799 1.00 46.03 P
ATOM 23 OP1 U A1399 54.629 163.496 64.231 1.00 43.16 O
ATOM 24 OP2 U A1399 55.817 165.773 64.375 1.00 44.83 O
ATOM 25 O5' U A1399 53.323 165.609 64.581 1.00 45.72 O
TER
ATOM 1 O3' A B1396 59.240 173.543 69.908 1.00 33.90 O
ATOM 2 P G B1397 59.190 173.067 68.380 1.00 36.65 P
ATOM 3 OP1 G B1397 60.306 173.717 67.654 1.00 36.51 O
ATOM 4 OP2 G B1397 57.795 173.212 67.877 1.00 37.48 O
ATOM 5 O5' G B1397 59.512 171.513 68.452 1.00 37.44 O
ATOM 6 C5' G B1397 60.815 171.054 68.810 1.00 37.43 C
ATOM 7 C4' G B1397 61.060 169.676 68.246 1.00 38.87 C
ATOM 8 O4' G B1397 62.339 169.207 68.747 1.00 37.60 O
ATOM 9 C3' G B1397 60.048 168.618 68.677 1.00 38.96 C
ATOM 10 O3' G B1397 60.096 167.542 67.742 1.00 39.03 O
ATOM 11 C2' G B1397 60.654 168.126 69.980 1.00 38.99 C
ATOM 12 O2' G B1397 60.181 166.845 70.336 1.00 41.19 O
ATOM 13 C1' G B1397 62.133 168.099 69.595 1.00 37.69 C
ATOM 14 N9 G B1397 63.092 168.174 70.690 1.00 36.66 N
ATOM 15 C8 G B1397 64.142 167.320 70.891 1.00 36.06 C
ATOM 16 N7 G B1397 64.841 167.609 71.948 1.00 36.28 N
ATOM 17 C5 G B1397 64.217 168.723 72.481 1.00 36.30 C
ATOM 18 C6 G B1397 64.535 169.478 73.630 1.00 37.51 C
ATOM 19 O6 G B1397 65.461 169.303 74.431 1.00 36.84 O
ATOM 20 N1 G B1397 63.647 170.531 73.811 1.00 38.48 N
ATOM 21 C2 G B1397 62.592 170.824 72.986 1.00 38.22 C
ATOM 22 N2 G B1397 61.851 171.890 73.337 1.00 35.52 N
ATOM 23 N3 G B1397 62.286 170.124 71.901 1.00 38.13 N
ATOM 24 C4 G B1397 63.136 169.092 71.714 1.00 36.28 C
ATOM 25 P C B1398 58.970 167.399 66.617 1.00 37.97 P
ATOM 26 OP1 C B1398 59.369 166.249 65.770 1.00 38.76 O
ATOM 27 OP2 C B1398 58.761 168.719 65.995 1.00 40.54 O
ATOM 28 O5' C B1398 57.663 167.001 67.429 1.00 38.81 O
TER
ATOM 2 P C A1398 58.970 167.399 66.617 1.00 37.97 P
ATOM 3 OP1 C A1398 59.369 166.249 65.770 1.00 38.76 O
ATOM 4 OP2 C A1398 58.761 168.719 65.995 1.00 40.54 O
ATOM 5 O5' C A1398 57.663 167.001 67.429 1.00 38.81 O
ATOM 6 C5' C A1398 57.457 165.650 67.892 1.00 38.97 C
ATOM 7 C4' C A1398 56.022 165.465 68.309 1.00 37.74 C
ATOM 8 O4' C A1398 55.719 166.398 69.376 1.00 37.14 O
ATOM 9 C3' C A1398 55.019 165.792 67.220 1.00 39.74 C
ATOM 10 O3' C A1398 54.791 164.670 66.387 1.00 43.73 O
ATOM 11 C2' C A1398 53.792 166.206 68.012 1.00 39.30 C
ATOM 12 O2' C A1398 53.076 165.095 68.514 1.00 37.57 O
ATOM 13 C1' C A1398 54.442 166.974 69.166 1.00 38.01 C
ATOM 14 N1 C A1398 54.639 168.412 68.894 1.00 37.81 N
ATOM 15 C2 C A1398 53.534 169.267 68.904 1.00 36.63 C
ATOM 16 O2 C A1398 52.410 168.792 69.106 1.00 37.69 O
ATOM 17 N3 C A1398 53.721 170.590 68.689 1.00 35.99 N
ATOM 18 C4 C A1398 54.949 171.066 68.465 1.00 37.34 C
ATOM 19 N4 C A1398 55.092 172.379 68.288 1.00 37.30 N
ATOM 20 C5 C A1398 56.089 170.216 68.423 1.00 39.13 C
ATOM 21 C6 C A1398 55.892 168.910 68.643 1.00 39.73 C
ATOM 22 P U A1399 54.714 164.866 64.799 1.00 46.03 P
ATOM 23 OP1 U A1399 54.629 163.496 64.231 1.00 43.16 O
ATOM 24 OP2 U A1399 55.817 165.773 64.375 1.00 44.83 O
ATOM 25 O5' U A1399 53.323 165.609 64.581 1.00 45.72 O
TER
ATOM 1 O3' A B1396 59.240 173.543 69.908 1.00 33.90 O
ATOM 2 P G B1397 59.190 173.067 68.380 1.00 36.65 P
ATOM 3 OP1 G B1397 60.306 173.717 67.654 1.00 36.51 O
ATOM 4 OP2 G B1397 57.795 173.212 67.877 1.00 37.48 O
ATOM 5 O5' G B1397 59.512 171.513 68.452 1.00 37.44 O
ATOM 6 C5' G B1397 60.815 171.054 68.810 1.00 37.43 C
ATOM 7 C4' G B1397 61.060 169.676 68.246 1.00 38.87 C
ATOM 8 O4' G B1397 62.339 169.207 68.747 1.00 37.60 O
ATOM 9 C3' G B1397 60.048 168.618 68.677 1.00 38.96 C
ATOM 10 O3' G B1397 60.096 167.542 67.742 1.00 39.03 O
ATOM 11 C2' G B1397 60.654 168.126 69.980 1.00 38.99 C
ATOM 12 O2' G B1397 60.181 166.845 70.336 1.00 41.19 O
ATOM 13 C1' G B1397 62.133 168.099 69.595 1.00 37.69 C
ATOM 14 N9 G B1397 63.092 168.174 70.690 1.00 36.66 N
ATOM 15 C8 G B1397 64.142 167.320 70.891 1.00 36.06 C
ATOM 16 N7 G B1397 64.841 167.609 71.948 1.00 36.28 N
ATOM 17 C5 G B1397 64.217 168.723 72.481 1.00 36.30 C
ATOM 18 C6 G B1397 64.535 169.478 73.630 1.00 37.51 C
ATOM 19 O6 G B1397 65.461 169.303 74.431 1.00 36.84 O
ATOM 20 N1 G B1397 63.647 170.531 73.811 1.00 38.48 N
ATOM 21 C2 G B1397 62.592 170.824 72.986 1.00 38.22 C
ATOM 22 N2 G B1397 61.851 171.890 73.337 1.00 35.52 N
ATOM 23 N3 G B1397 62.286 170.124 71.901 1.00 38.13 N
ATOM 24 C4 G B1397 63.136 169.092 71.714 1.00 36.28 C
ATOM 25 P C B1398 58.970 167.399 66.617 1.00 37.97 P
ATOM 26 OP1 C B1398 59.369 166.249 65.770 1.00 38.76 O
ATOM 27 OP2 C B1398 58.761 168.719 65.995 1.00 40.54 O
ATOM 28 O5' C B1398 57.663 167.001 67.429 1.00 38.81 O
TER
Atoms:
C2: (53.534,169.267,68.904)
OP1: (59.369,166.249,65.770)
OP2: (58.761,168.719,65.995)
C4: (54.949,171.066,68.465)
O5': (57.663,167.001,67.429)
C3': (55.019,165.792,67.220)
C1': (54.442,166.974,69.166)
O4': (55.719,166.398,69.376)
C5': (57.457,165.650,67.892)
P: (58.970,167.399,66.617)
O2: (52.410,168.792,69.106)
C4': (56.022,165.465,68.309)
C2': (53.792,166.206,68.012)
O2': (53.076,165.095,68.514)
N1: (54.639,168.412,68.894)
N3: (53.721,170.590,68.689)
N4: (55.092,172.379,68.288)
C6: (55.892,168.910,68.643)
C5: (56.089,170.216,68.423)
O3': (54.791,164.670,66.387)
OP1: (59.369,166.249,65.770)
OP2: (58.761,168.719,65.995)
C4: (54.949,171.066,68.465)
O5': (57.663,167.001,67.429)
C3': (55.019,165.792,67.220)
C1': (54.442,166.974,69.166)
O4': (55.719,166.398,69.376)
C5': (57.457,165.650,67.892)
P: (58.970,167.399,66.617)
O2: (52.410,168.792,69.106)
C4': (56.022,165.465,68.309)
C2': (53.792,166.206,68.012)
O2': (53.076,165.095,68.514)
N1: (54.639,168.412,68.894)
N3: (53.721,170.590,68.689)
N4: (55.092,172.379,68.288)
C6: (55.892,168.910,68.643)
C5: (56.089,170.216,68.423)
O3': (54.791,164.670,66.387)
OP1: (60.306,173.717,67.654)
OP2: (57.795,173.212,67.877)
C3': (60.048,168.618,68.677)
C1': (62.133,168.099,69.595)
C5': (60.815,171.054,68.810)
O6: (65.461,169.303,74.431)
O4': (62.339,169.207,68.747)
C8: (64.142,167.320,70.891)
C2: (62.592,170.824,72.986)
C6: (64.535,169.478,73.630)
C5: (64.217,168.723,72.481)
C4: (63.136,169.092,71.714)
P: (59.190,173.067,68.380)
C4': (61.060,169.676,68.246)
C2': (60.654,168.126,69.980)
O2': (60.181,166.845,70.336)
N1: (63.647,170.531,73.811)
N2: (61.851,171.890,73.337)
N3: (62.286,170.124,71.901)
N7: (64.841,167.609,71.948)
N9: (63.092,168.174,70.690)
O5': (59.512,171.513,68.452)
O3': (60.096,167.542,67.742)
OP2: (57.795,173.212,67.877)
C3': (60.048,168.618,68.677)
C1': (62.133,168.099,69.595)
C5': (60.815,171.054,68.810)
O6: (65.461,169.303,74.431)
O4': (62.339,169.207,68.747)
C8: (64.142,167.320,70.891)
C2: (62.592,170.824,72.986)
C6: (64.535,169.478,73.630)
C5: (64.217,168.723,72.481)
C4: (63.136,169.092,71.714)
P: (59.190,173.067,68.380)
C4': (61.060,169.676,68.246)
C2': (60.654,168.126,69.980)
O2': (60.181,166.845,70.336)
N1: (63.647,170.531,73.811)
N2: (61.851,171.890,73.337)
N3: (62.286,170.124,71.901)
N7: (64.841,167.609,71.948)
N9: (63.092,168.174,70.690)
O5': (59.512,171.513,68.452)
O3': (60.096,167.542,67.742)
Image (generated by PyMOL):