Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0886:0885
Extra
PDB:
ATOM 1 O3' G A 885 59.148 104.212 77.231 1.00 21.30 O
ATOM 2 P C A 886 57.985 104.870 78.117 1.00 22.93 P
ATOM 3 OP1 C A 886 57.854 104.083 79.369 1.00 23.81 O
ATOM 4 OP2 C A 886 56.799 105.068 77.247 1.00 22.07 O
ATOM 5 O5' C A 886 58.537 106.307 78.501 1.00 25.94 O
ATOM 6 C5' C A 886 59.410 106.495 79.631 1.00 25.73 C
ATOM 7 C4' C A 886 59.648 107.968 79.856 1.00 27.95 C
ATOM 8 O4' C A 886 60.393 108.522 78.736 1.00 25.57 O
ATOM 9 C3' C A 886 58.396 108.833 79.935 1.00 27.52 C
ATOM 10 O3' C A 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 11 C2' C A 886 58.949 110.205 79.576 1.00 28.08 C
ATOM 12 O2' C A 886 59.678 110.779 80.648 1.00 29.28 O
ATOM 13 C1' C A 886 59.946 109.839 78.475 1.00 25.75 C
ATOM 14 N1 C A 886 59.389 109.878 77.107 1.00 27.47 N
ATOM 15 C2 C A 886 59.106 111.122 76.522 1.00 27.77 C
ATOM 16 O2 C A 886 59.278 112.151 77.184 1.00 29.48 O
ATOM 17 N3 C A 886 58.652 111.167 75.251 1.00 29.25 N
ATOM 18 C4 C A 886 58.477 110.034 74.565 1.00 30.29 C
ATOM 19 N4 C A 886 58.065 110.128 73.299 1.00 29.69 N
ATOM 20 C5 C A 886 58.727 108.755 75.142 1.00 29.63 C
ATOM 21 C6 C A 886 59.173 108.723 76.404 1.00 28.36 C
ATOM 22 P U A 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 23 OP1 U A 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 24 OP2 U A 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 25 O5' U A 887 55.686 110.111 81.375 1.00 26.18 O
TER
ATOM 1 O3' A B 884 60.318 106.368 72.059 1.00 27.69 O
ATOM 2 P G B 885 58.719 106.289 72.081 1.00 27.51 P
ATOM 3 OP1 G B 885 58.344 105.135 71.232 1.00 28.94 O
ATOM 4 OP2 G B 885 58.140 107.619 71.804 1.00 23.19 O
ATOM 5 O5' G B 885 58.410 105.951 73.604 1.00 26.64 O
ATOM 6 C5' G B 885 57.691 104.770 73.970 1.00 24.28 C
ATOM 7 C4' G B 885 58.509 103.933 74.918 1.00 23.06 C
ATOM 8 O4' G B 885 59.418 103.091 74.158 1.00 23.50 O
ATOM 9 C3' G B 885 59.378 104.699 75.918 1.00 23.02 C
ATOM 10 O3' G B 885 59.148 104.212 77.231 1.00 21.30 O
ATOM 11 C2' G B 885 60.801 104.377 75.446 1.00 23.20 C
ATOM 12 O2' G B 885 61.779 104.356 76.464 1.00 22.59 O
ATOM 13 C1' G B 885 60.622 102.981 74.868 1.00 21.24 C
ATOM 14 N9 G B 885 61.694 102.593 73.954 1.00 22.57 N
ATOM 15 C8 G B 885 62.052 103.197 72.769 1.00 20.87 C
ATOM 16 N7 G B 885 63.110 102.662 72.224 1.00 19.90 N
ATOM 17 C5 G B 885 63.465 101.636 73.091 1.00 21.52 C
ATOM 18 C6 G B 885 64.549 100.719 73.044 1.00 22.50 C
ATOM 19 O6 G B 885 65.464 100.644 72.223 1.00 20.95 O
ATOM 20 N1 G B 885 64.513 99.833 74.110 1.00 23.05 N
ATOM 21 C2 G B 885 63.578 99.837 75.108 1.00 24.39 C
ATOM 22 N2 G B 885 63.718 98.900 76.056 1.00 25.91 N
ATOM 23 N3 G B 885 62.580 100.696 75.177 1.00 23.83 N
ATOM 24 C4 G B 885 62.585 101.561 74.145 1.00 21.62 C
ATOM 25 P C B 886 57.985 104.870 78.117 1.00 22.93 P
ATOM 26 OP1 C B 886 57.854 104.083 79.369 1.00 23.81 O
ATOM 27 OP2 C B 886 56.799 105.068 77.247 1.00 22.07 O
ATOM 28 O5' C B 886 58.537 106.307 78.501 1.00 25.94 O
TER
ATOM 2 P C A 886 57.985 104.870 78.117 1.00 22.93 P
ATOM 3 OP1 C A 886 57.854 104.083 79.369 1.00 23.81 O
ATOM 4 OP2 C A 886 56.799 105.068 77.247 1.00 22.07 O
ATOM 5 O5' C A 886 58.537 106.307 78.501 1.00 25.94 O
ATOM 6 C5' C A 886 59.410 106.495 79.631 1.00 25.73 C
ATOM 7 C4' C A 886 59.648 107.968 79.856 1.00 27.95 C
ATOM 8 O4' C A 886 60.393 108.522 78.736 1.00 25.57 O
ATOM 9 C3' C A 886 58.396 108.833 79.935 1.00 27.52 C
ATOM 10 O3' C A 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 11 C2' C A 886 58.949 110.205 79.576 1.00 28.08 C
ATOM 12 O2' C A 886 59.678 110.779 80.648 1.00 29.28 O
ATOM 13 C1' C A 886 59.946 109.839 78.475 1.00 25.75 C
ATOM 14 N1 C A 886 59.389 109.878 77.107 1.00 27.47 N
ATOM 15 C2 C A 886 59.106 111.122 76.522 1.00 27.77 C
ATOM 16 O2 C A 886 59.278 112.151 77.184 1.00 29.48 O
ATOM 17 N3 C A 886 58.652 111.167 75.251 1.00 29.25 N
ATOM 18 C4 C A 886 58.477 110.034 74.565 1.00 30.29 C
ATOM 19 N4 C A 886 58.065 110.128 73.299 1.00 29.69 N
ATOM 20 C5 C A 886 58.727 108.755 75.142 1.00 29.63 C
ATOM 21 C6 C A 886 59.173 108.723 76.404 1.00 28.36 C
ATOM 22 P U A 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 23 OP1 U A 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 24 OP2 U A 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 25 O5' U A 887 55.686 110.111 81.375 1.00 26.18 O
TER
ATOM 1 O3' A B 884 60.318 106.368 72.059 1.00 27.69 O
ATOM 2 P G B 885 58.719 106.289 72.081 1.00 27.51 P
ATOM 3 OP1 G B 885 58.344 105.135 71.232 1.00 28.94 O
ATOM 4 OP2 G B 885 58.140 107.619 71.804 1.00 23.19 O
ATOM 5 O5' G B 885 58.410 105.951 73.604 1.00 26.64 O
ATOM 6 C5' G B 885 57.691 104.770 73.970 1.00 24.28 C
ATOM 7 C4' G B 885 58.509 103.933 74.918 1.00 23.06 C
ATOM 8 O4' G B 885 59.418 103.091 74.158 1.00 23.50 O
ATOM 9 C3' G B 885 59.378 104.699 75.918 1.00 23.02 C
ATOM 10 O3' G B 885 59.148 104.212 77.231 1.00 21.30 O
ATOM 11 C2' G B 885 60.801 104.377 75.446 1.00 23.20 C
ATOM 12 O2' G B 885 61.779 104.356 76.464 1.00 22.59 O
ATOM 13 C1' G B 885 60.622 102.981 74.868 1.00 21.24 C
ATOM 14 N9 G B 885 61.694 102.593 73.954 1.00 22.57 N
ATOM 15 C8 G B 885 62.052 103.197 72.769 1.00 20.87 C
ATOM 16 N7 G B 885 63.110 102.662 72.224 1.00 19.90 N
ATOM 17 C5 G B 885 63.465 101.636 73.091 1.00 21.52 C
ATOM 18 C6 G B 885 64.549 100.719 73.044 1.00 22.50 C
ATOM 19 O6 G B 885 65.464 100.644 72.223 1.00 20.95 O
ATOM 20 N1 G B 885 64.513 99.833 74.110 1.00 23.05 N
ATOM 21 C2 G B 885 63.578 99.837 75.108 1.00 24.39 C
ATOM 22 N2 G B 885 63.718 98.900 76.056 1.00 25.91 N
ATOM 23 N3 G B 885 62.580 100.696 75.177 1.00 23.83 N
ATOM 24 C4 G B 885 62.585 101.561 74.145 1.00 21.62 C
ATOM 25 P C B 886 57.985 104.870 78.117 1.00 22.93 P
ATOM 26 OP1 C B 886 57.854 104.083 79.369 1.00 23.81 O
ATOM 27 OP2 C B 886 56.799 105.068 77.247 1.00 22.07 O
ATOM 28 O5' C B 886 58.537 106.307 78.501 1.00 25.94 O
TER
Atoms:
C2: (59.106,111.122,76.522)
OP1: (57.854,104.083,79.369)
OP2: (56.799,105.068,77.247)
C4: (58.477,110.034,74.565)
O5': (58.537,106.307,78.501)
C3': (58.396,108.833,79.935)
C1': (59.946,109.839,78.475)
O4': (60.393,108.522,78.736)
C5': (59.410,106.495,79.631)
P: (57.985,104.870,78.117)
O2: (59.278,112.151,77.184)
C4': (59.648,107.968,79.856)
C2': (58.949,110.205,79.576)
O2': (59.678,110.779,80.648)
N1: (59.389,109.878,77.107)
N3: (58.652,111.167,75.251)
N4: (58.065,110.128,73.299)
C6: (59.173,108.723,76.404)
C5: (58.727,108.755,75.142)
O3': (57.841,108.803,81.246)
OP1: (57.854,104.083,79.369)
OP2: (56.799,105.068,77.247)
C4: (58.477,110.034,74.565)
O5': (58.537,106.307,78.501)
C3': (58.396,108.833,79.935)
C1': (59.946,109.839,78.475)
O4': (60.393,108.522,78.736)
C5': (59.410,106.495,79.631)
P: (57.985,104.870,78.117)
O2: (59.278,112.151,77.184)
C4': (59.648,107.968,79.856)
C2': (58.949,110.205,79.576)
O2': (59.678,110.779,80.648)
N1: (59.389,109.878,77.107)
N3: (58.652,111.167,75.251)
N4: (58.065,110.128,73.299)
C6: (59.173,108.723,76.404)
C5: (58.727,108.755,75.142)
O3': (57.841,108.803,81.246)
OP1: (58.344,105.135,71.232)
OP2: (58.140,107.619,71.804)
C3': (59.378,104.699,75.918)
C1': (60.622,102.981,74.868)
C5': (57.691,104.770,73.970)
O6: (65.464,100.644,72.223)
O4': (59.418,103.091,74.158)
C8: (62.052,103.197,72.769)
C2: (63.578,99.837,75.108)
C6: (64.549,100.719,73.044)
C5: (63.465,101.636,73.091)
C4: (62.585,101.561,74.145)
P: (58.719,106.289,72.081)
C4': (58.509,103.933,74.918)
C2': (60.801,104.377,75.446)
O2': (61.779,104.356,76.464)
N1: (64.513,99.833,74.110)
N2: (63.718,98.900,76.056)
N3: (62.580,100.696,75.177)
N7: (63.110,102.662,72.224)
N9: (61.694,102.593,73.954)
O5': (58.410,105.951,73.604)
O3': (59.148,104.212,77.231)
OP2: (58.140,107.619,71.804)
C3': (59.378,104.699,75.918)
C1': (60.622,102.981,74.868)
C5': (57.691,104.770,73.970)
O6: (65.464,100.644,72.223)
O4': (59.418,103.091,74.158)
C8: (62.052,103.197,72.769)
C2: (63.578,99.837,75.108)
C6: (64.549,100.719,73.044)
C5: (63.465,101.636,73.091)
C4: (62.585,101.561,74.145)
P: (58.719,106.289,72.081)
C4': (58.509,103.933,74.918)
C2': (60.801,104.377,75.446)
O2': (61.779,104.356,76.464)
N1: (64.513,99.833,74.110)
N2: (63.718,98.900,76.056)
N3: (62.580,100.696,75.177)
N7: (63.110,102.662,72.224)
N9: (61.694,102.593,73.954)
O5': (58.410,105.951,73.604)
O3': (59.148,104.212,77.231)
Image (generated by PyMOL):