Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01398:01397
Extra
PDB:
ATOM 1 O3' G A1397 60.362 167.337 67.592 1.00 41.06 O
ATOM 2 P C A1398 59.204 167.201 66.494 1.00 40.29 P
ATOM 3 OP1 C A1398 59.533 166.024 65.665 1.00 41.32 O
ATOM 4 OP2 C A1398 59.023 168.516 65.840 1.00 43.30 O
ATOM 5 O5' C A1398 57.904 166.873 67.349 1.00 40.23 O
ATOM 6 C5' C A1398 57.685 165.554 67.890 1.00 40.13 C
ATOM 7 C4' C A1398 56.234 165.384 68.261 1.00 39.77 C
ATOM 8 O4' C A1398 55.887 166.331 69.303 1.00 37.18 O
ATOM 9 C3' C A1398 55.266 165.676 67.130 1.00 42.11 C
ATOM 10 O3' C A1398 55.067 164.515 66.334 1.00 46.97 O
ATOM 11 C2' C A1398 54.011 166.103 67.874 1.00 40.40 C
ATOM 12 O2' C A1398 53.292 164.999 68.385 1.00 40.36 O
ATOM 13 C1' C A1398 54.614 166.887 69.041 1.00 37.52 C
ATOM 14 N1 C A1398 54.800 168.325 68.777 1.00 37.11 N
ATOM 15 C2 C A1398 53.696 169.169 68.814 1.00 34.91 C
ATOM 16 O2 C A1398 52.581 168.683 69.004 1.00 33.97 O
ATOM 17 N3 C A1398 53.875 170.498 68.634 1.00 34.60 N
ATOM 18 C4 C A1398 55.101 170.984 68.414 1.00 35.27 C
ATOM 19 N4 C A1398 55.242 172.301 68.278 1.00 35.63 N
ATOM 20 C5 C A1398 56.239 170.141 68.334 1.00 36.25 C
ATOM 21 C6 C A1398 56.047 168.832 68.518 1.00 38.49 C
ATOM 22 P U A1399 54.905 164.654 64.745 1.00 49.41 P
ATOM 23 OP1 U A1399 54.778 163.263 64.241 1.00 47.55 O
ATOM 24 OP2 U A1399 55.996 165.522 64.235 1.00 49.41 O
ATOM 25 O5' U A1399 53.511 165.402 64.564 1.00 48.40 O
TER
ATOM 1 O3' A B1396 59.383 173.241 69.834 1.00 34.33 O
ATOM 2 P G B1397 59.315 172.805 68.291 1.00 36.57 P
ATOM 3 OP1 G B1397 60.405 173.500 67.562 1.00 37.27 O
ATOM 4 OP2 G B1397 57.909 172.919 67.803 1.00 37.82 O
ATOM 5 O5' G B1397 59.671 171.261 68.324 1.00 37.57 O
ATOM 6 C5' G B1397 60.951 170.826 68.774 1.00 38.50 C
ATOM 7 C4' G B1397 61.274 169.479 68.191 1.00 39.53 C
ATOM 8 O4' G B1397 62.558 169.072 68.711 1.00 38.92 O
ATOM 9 C3' G B1397 60.300 168.370 68.575 1.00 40.17 C
ATOM 10 O3' G B1397 60.362 167.337 67.592 1.00 41.06 O
ATOM 11 C2' G B1397 60.908 167.860 69.870 1.00 40.16 C
ATOM 12 O2' G B1397 60.494 166.542 70.162 1.00 41.35 O
ATOM 13 C1' G B1397 62.397 167.934 69.525 1.00 39.52 C
ATOM 14 N9 G B1397 63.314 168.055 70.652 1.00 38.77 N
ATOM 15 C8 G B1397 64.371 167.228 70.913 1.00 38.27 C
ATOM 16 N7 G B1397 65.023 167.558 71.989 1.00 39.18 N
ATOM 17 C5 G B1397 64.359 168.671 72.469 1.00 37.67 C
ATOM 18 C6 G B1397 64.610 169.453 73.616 1.00 38.70 C
ATOM 19 O6 G B1397 65.491 169.304 74.469 1.00 37.98 O
ATOM 20 N1 G B1397 63.704 170.497 73.731 1.00 39.81 N
ATOM 21 C2 G B1397 62.684 170.752 72.857 1.00 40.52 C
ATOM 22 N2 G B1397 61.923 171.818 73.146 1.00 40.58 N
ATOM 23 N3 G B1397 62.431 170.018 71.781 1.00 40.27 N
ATOM 24 C4 G B1397 63.305 169.000 71.653 1.00 37.95 C
ATOM 25 P C B1398 59.204 167.201 66.494 1.00 40.29 P
ATOM 26 OP1 C B1398 59.533 166.024 65.665 1.00 41.32 O
ATOM 27 OP2 C B1398 59.023 168.516 65.840 1.00 43.30 O
ATOM 28 O5' C B1398 57.904 166.873 67.349 1.00 40.23 O
TER
ATOM 2 P C A1398 59.204 167.201 66.494 1.00 40.29 P
ATOM 3 OP1 C A1398 59.533 166.024 65.665 1.00 41.32 O
ATOM 4 OP2 C A1398 59.023 168.516 65.840 1.00 43.30 O
ATOM 5 O5' C A1398 57.904 166.873 67.349 1.00 40.23 O
ATOM 6 C5' C A1398 57.685 165.554 67.890 1.00 40.13 C
ATOM 7 C4' C A1398 56.234 165.384 68.261 1.00 39.77 C
ATOM 8 O4' C A1398 55.887 166.331 69.303 1.00 37.18 O
ATOM 9 C3' C A1398 55.266 165.676 67.130 1.00 42.11 C
ATOM 10 O3' C A1398 55.067 164.515 66.334 1.00 46.97 O
ATOM 11 C2' C A1398 54.011 166.103 67.874 1.00 40.40 C
ATOM 12 O2' C A1398 53.292 164.999 68.385 1.00 40.36 O
ATOM 13 C1' C A1398 54.614 166.887 69.041 1.00 37.52 C
ATOM 14 N1 C A1398 54.800 168.325 68.777 1.00 37.11 N
ATOM 15 C2 C A1398 53.696 169.169 68.814 1.00 34.91 C
ATOM 16 O2 C A1398 52.581 168.683 69.004 1.00 33.97 O
ATOM 17 N3 C A1398 53.875 170.498 68.634 1.00 34.60 N
ATOM 18 C4 C A1398 55.101 170.984 68.414 1.00 35.27 C
ATOM 19 N4 C A1398 55.242 172.301 68.278 1.00 35.63 N
ATOM 20 C5 C A1398 56.239 170.141 68.334 1.00 36.25 C
ATOM 21 C6 C A1398 56.047 168.832 68.518 1.00 38.49 C
ATOM 22 P U A1399 54.905 164.654 64.745 1.00 49.41 P
ATOM 23 OP1 U A1399 54.778 163.263 64.241 1.00 47.55 O
ATOM 24 OP2 U A1399 55.996 165.522 64.235 1.00 49.41 O
ATOM 25 O5' U A1399 53.511 165.402 64.564 1.00 48.40 O
TER
ATOM 1 O3' A B1396 59.383 173.241 69.834 1.00 34.33 O
ATOM 2 P G B1397 59.315 172.805 68.291 1.00 36.57 P
ATOM 3 OP1 G B1397 60.405 173.500 67.562 1.00 37.27 O
ATOM 4 OP2 G B1397 57.909 172.919 67.803 1.00 37.82 O
ATOM 5 O5' G B1397 59.671 171.261 68.324 1.00 37.57 O
ATOM 6 C5' G B1397 60.951 170.826 68.774 1.00 38.50 C
ATOM 7 C4' G B1397 61.274 169.479 68.191 1.00 39.53 C
ATOM 8 O4' G B1397 62.558 169.072 68.711 1.00 38.92 O
ATOM 9 C3' G B1397 60.300 168.370 68.575 1.00 40.17 C
ATOM 10 O3' G B1397 60.362 167.337 67.592 1.00 41.06 O
ATOM 11 C2' G B1397 60.908 167.860 69.870 1.00 40.16 C
ATOM 12 O2' G B1397 60.494 166.542 70.162 1.00 41.35 O
ATOM 13 C1' G B1397 62.397 167.934 69.525 1.00 39.52 C
ATOM 14 N9 G B1397 63.314 168.055 70.652 1.00 38.77 N
ATOM 15 C8 G B1397 64.371 167.228 70.913 1.00 38.27 C
ATOM 16 N7 G B1397 65.023 167.558 71.989 1.00 39.18 N
ATOM 17 C5 G B1397 64.359 168.671 72.469 1.00 37.67 C
ATOM 18 C6 G B1397 64.610 169.453 73.616 1.00 38.70 C
ATOM 19 O6 G B1397 65.491 169.304 74.469 1.00 37.98 O
ATOM 20 N1 G B1397 63.704 170.497 73.731 1.00 39.81 N
ATOM 21 C2 G B1397 62.684 170.752 72.857 1.00 40.52 C
ATOM 22 N2 G B1397 61.923 171.818 73.146 1.00 40.58 N
ATOM 23 N3 G B1397 62.431 170.018 71.781 1.00 40.27 N
ATOM 24 C4 G B1397 63.305 169.000 71.653 1.00 37.95 C
ATOM 25 P C B1398 59.204 167.201 66.494 1.00 40.29 P
ATOM 26 OP1 C B1398 59.533 166.024 65.665 1.00 41.32 O
ATOM 27 OP2 C B1398 59.023 168.516 65.840 1.00 43.30 O
ATOM 28 O5' C B1398 57.904 166.873 67.349 1.00 40.23 O
TER
Atoms:
C2: (53.696,169.169,68.814)
OP1: (59.533,166.024,65.665)
OP2: (59.023,168.516,65.840)
C4: (55.101,170.984,68.414)
O5': (57.904,166.873,67.349)
C3': (55.266,165.676,67.130)
C1': (54.614,166.887,69.041)
O4': (55.887,166.331,69.303)
C5': (57.685,165.554,67.890)
P: (59.204,167.201,66.494)
O2: (52.581,168.683,69.004)
C4': (56.234,165.384,68.261)
C2': (54.011,166.103,67.874)
O2': (53.292,164.999,68.385)
N1: (54.800,168.325,68.777)
N3: (53.875,170.498,68.634)
N4: (55.242,172.301,68.278)
C6: (56.047,168.832,68.518)
C5: (56.239,170.141,68.334)
O3': (55.067,164.515,66.334)
OP1: (59.533,166.024,65.665)
OP2: (59.023,168.516,65.840)
C4: (55.101,170.984,68.414)
O5': (57.904,166.873,67.349)
C3': (55.266,165.676,67.130)
C1': (54.614,166.887,69.041)
O4': (55.887,166.331,69.303)
C5': (57.685,165.554,67.890)
P: (59.204,167.201,66.494)
O2: (52.581,168.683,69.004)
C4': (56.234,165.384,68.261)
C2': (54.011,166.103,67.874)
O2': (53.292,164.999,68.385)
N1: (54.800,168.325,68.777)
N3: (53.875,170.498,68.634)
N4: (55.242,172.301,68.278)
C6: (56.047,168.832,68.518)
C5: (56.239,170.141,68.334)
O3': (55.067,164.515,66.334)
OP1: (60.405,173.500,67.562)
OP2: (57.909,172.919,67.803)
C3': (60.300,168.370,68.575)
C1': (62.397,167.934,69.525)
C5': (60.951,170.826,68.774)
O6: (65.491,169.304,74.469)
O4': (62.558,169.072,68.711)
C8: (64.371,167.228,70.913)
C2: (62.684,170.752,72.857)
C6: (64.610,169.453,73.616)
C5: (64.359,168.671,72.469)
C4: (63.305,169.000,71.653)
P: (59.315,172.805,68.291)
C4': (61.274,169.479,68.191)
C2': (60.908,167.860,69.870)
O2': (60.494,166.542,70.162)
N1: (63.704,170.497,73.731)
N2: (61.923,171.818,73.146)
N3: (62.431,170.018,71.781)
N7: (65.023,167.558,71.989)
N9: (63.314,168.055,70.652)
O5': (59.671,171.261,68.324)
O3': (60.362,167.337,67.592)
OP2: (57.909,172.919,67.803)
C3': (60.300,168.370,68.575)
C1': (62.397,167.934,69.525)
C5': (60.951,170.826,68.774)
O6: (65.491,169.304,74.469)
O4': (62.558,169.072,68.711)
C8: (64.371,167.228,70.913)
C2: (62.684,170.752,72.857)
C6: (64.610,169.453,73.616)
C5: (64.359,168.671,72.469)
C4: (63.305,169.000,71.653)
P: (59.315,172.805,68.291)
C4': (61.274,169.479,68.191)
C2': (60.908,167.860,69.870)
O2': (60.494,166.542,70.162)
N1: (63.704,170.497,73.731)
N2: (61.923,171.818,73.146)
N3: (62.431,170.018,71.781)
N7: (65.023,167.558,71.989)
N9: (63.314,168.055,70.652)
O5': (59.671,171.261,68.324)
O3': (60.362,167.337,67.592)
Image (generated by PyMOL):