Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0886:0885
Extra
PDB:
ATOM 1 O3' G A 885 59.148 104.019 77.208 1.00 22.86 O
ATOM 2 P C A 886 58.048 104.763 78.103 1.00 24.33 P
ATOM 3 OP1 C A 886 57.872 103.997 79.365 1.00 24.31 O
ATOM 4 OP2 C A 886 56.878 105.038 77.244 1.00 22.84 O
ATOM 5 O5' C A 886 58.717 106.162 78.452 1.00 27.18 O
ATOM 6 C5' C A 886 59.480 106.347 79.663 1.00 27.19 C
ATOM 7 C4' C A 886 59.742 107.817 79.891 1.00 27.32 C
ATOM 8 O4' C A 886 60.498 108.351 78.773 1.00 26.81 O
ATOM 9 C3' C A 886 58.508 108.700 79.961 1.00 26.45 C
ATOM 10 O3' C A 886 57.951 108.681 81.271 1.00 27.04 O
ATOM 11 C2' C A 886 59.077 110.062 79.588 1.00 26.29 C
ATOM 12 O2' C A 886 59.785 110.679 80.647 1.00 24.46 O
ATOM 13 C1' C A 886 60.080 109.675 78.503 1.00 24.93 C
ATOM 14 N1 C A 886 59.532 109.723 77.134 1.00 26.06 N
ATOM 15 C2 C A 886 59.208 110.972 76.578 1.00 27.72 C
ATOM 16 O2 C A 886 59.377 111.990 77.258 1.00 29.09 O
ATOM 17 N3 C A 886 58.721 111.033 75.314 1.00 28.09 N
ATOM 18 C4 C A 886 58.564 109.910 74.606 1.00 29.02 C
ATOM 19 N4 C A 886 58.107 110.016 73.356 1.00 27.27 N
ATOM 20 C5 C A 886 58.878 108.625 75.149 1.00 28.68 C
ATOM 21 C6 C A 886 59.351 108.579 76.405 1.00 26.53 C
ATOM 22 P U A 887 56.372 108.489 81.470 1.00 28.67 P
ATOM 23 OP1 U A 887 56.176 107.992 82.861 1.00 26.15 O
ATOM 24 OP2 U A 887 55.850 107.699 80.324 1.00 28.75 O
ATOM 25 O5' U A 887 55.791 109.971 81.407 1.00 27.15 O
TER
ATOM 1 O3' A B 884 60.414 106.215 72.048 1.00 30.22 O
ATOM 2 P G B 885 58.806 106.137 72.087 1.00 28.86 P
ATOM 3 OP1 G B 885 58.375 105.018 71.221 1.00 28.37 O
ATOM 4 OP2 G B 885 58.240 107.488 71.871 1.00 26.14 O
ATOM 5 O5' G B 885 58.519 105.740 73.595 1.00 26.44 O
ATOM 6 C5' G B 885 57.805 104.547 73.917 1.00 24.45 C
ATOM 7 C4' G B 885 58.594 103.723 74.897 1.00 23.70 C
ATOM 8 O4' G B 885 59.533 102.879 74.184 1.00 24.22 O
ATOM 9 C3' G B 885 59.423 104.508 75.912 1.00 23.40 C
ATOM 10 O3' G B 885 59.148 104.019 77.208 1.00 22.86 O
ATOM 11 C2' G B 885 60.863 104.210 75.483 1.00 23.48 C
ATOM 12 O2' G B 885 61.809 104.213 76.528 1.00 23.75 O
ATOM 13 C1' G B 885 60.726 102.806 74.920 1.00 23.37 C
ATOM 14 N9 G B 885 61.816 102.428 74.025 1.00 24.91 N
ATOM 15 C8 G B 885 62.209 103.061 72.871 1.00 24.18 C
ATOM 16 N7 G B 885 63.254 102.512 72.318 1.00 23.13 N
ATOM 17 C5 G B 885 63.571 101.452 73.155 1.00 23.46 C
ATOM 18 C6 G B 885 64.627 100.514 73.088 1.00 23.41 C
ATOM 19 O6 G B 885 65.545 100.447 72.276 1.00 22.34 O
ATOM 20 N1 G B 885 64.559 99.594 74.119 1.00 25.20 N
ATOM 21 C2 G B 885 63.613 99.584 75.107 1.00 27.53 C
ATOM 22 N2 G B 885 63.718 98.606 76.012 1.00 29.70 N
ATOM 23 N3 G B 885 62.637 100.468 75.200 1.00 27.35 N
ATOM 24 C4 G B 885 62.677 101.369 74.196 1.00 25.29 C
ATOM 25 P C B 886 58.048 104.763 78.103 1.00 24.33 P
ATOM 26 OP1 C B 886 57.872 103.997 79.365 1.00 24.31 O
ATOM 27 OP2 C B 886 56.878 105.038 77.244 1.00 22.84 O
ATOM 28 O5' C B 886 58.717 106.162 78.452 1.00 27.18 O
TER
ATOM 2 P C A 886 58.048 104.763 78.103 1.00 24.33 P
ATOM 3 OP1 C A 886 57.872 103.997 79.365 1.00 24.31 O
ATOM 4 OP2 C A 886 56.878 105.038 77.244 1.00 22.84 O
ATOM 5 O5' C A 886 58.717 106.162 78.452 1.00 27.18 O
ATOM 6 C5' C A 886 59.480 106.347 79.663 1.00 27.19 C
ATOM 7 C4' C A 886 59.742 107.817 79.891 1.00 27.32 C
ATOM 8 O4' C A 886 60.498 108.351 78.773 1.00 26.81 O
ATOM 9 C3' C A 886 58.508 108.700 79.961 1.00 26.45 C
ATOM 10 O3' C A 886 57.951 108.681 81.271 1.00 27.04 O
ATOM 11 C2' C A 886 59.077 110.062 79.588 1.00 26.29 C
ATOM 12 O2' C A 886 59.785 110.679 80.647 1.00 24.46 O
ATOM 13 C1' C A 886 60.080 109.675 78.503 1.00 24.93 C
ATOM 14 N1 C A 886 59.532 109.723 77.134 1.00 26.06 N
ATOM 15 C2 C A 886 59.208 110.972 76.578 1.00 27.72 C
ATOM 16 O2 C A 886 59.377 111.990 77.258 1.00 29.09 O
ATOM 17 N3 C A 886 58.721 111.033 75.314 1.00 28.09 N
ATOM 18 C4 C A 886 58.564 109.910 74.606 1.00 29.02 C
ATOM 19 N4 C A 886 58.107 110.016 73.356 1.00 27.27 N
ATOM 20 C5 C A 886 58.878 108.625 75.149 1.00 28.68 C
ATOM 21 C6 C A 886 59.351 108.579 76.405 1.00 26.53 C
ATOM 22 P U A 887 56.372 108.489 81.470 1.00 28.67 P
ATOM 23 OP1 U A 887 56.176 107.992 82.861 1.00 26.15 O
ATOM 24 OP2 U A 887 55.850 107.699 80.324 1.00 28.75 O
ATOM 25 O5' U A 887 55.791 109.971 81.407 1.00 27.15 O
TER
ATOM 1 O3' A B 884 60.414 106.215 72.048 1.00 30.22 O
ATOM 2 P G B 885 58.806 106.137 72.087 1.00 28.86 P
ATOM 3 OP1 G B 885 58.375 105.018 71.221 1.00 28.37 O
ATOM 4 OP2 G B 885 58.240 107.488 71.871 1.00 26.14 O
ATOM 5 O5' G B 885 58.519 105.740 73.595 1.00 26.44 O
ATOM 6 C5' G B 885 57.805 104.547 73.917 1.00 24.45 C
ATOM 7 C4' G B 885 58.594 103.723 74.897 1.00 23.70 C
ATOM 8 O4' G B 885 59.533 102.879 74.184 1.00 24.22 O
ATOM 9 C3' G B 885 59.423 104.508 75.912 1.00 23.40 C
ATOM 10 O3' G B 885 59.148 104.019 77.208 1.00 22.86 O
ATOM 11 C2' G B 885 60.863 104.210 75.483 1.00 23.48 C
ATOM 12 O2' G B 885 61.809 104.213 76.528 1.00 23.75 O
ATOM 13 C1' G B 885 60.726 102.806 74.920 1.00 23.37 C
ATOM 14 N9 G B 885 61.816 102.428 74.025 1.00 24.91 N
ATOM 15 C8 G B 885 62.209 103.061 72.871 1.00 24.18 C
ATOM 16 N7 G B 885 63.254 102.512 72.318 1.00 23.13 N
ATOM 17 C5 G B 885 63.571 101.452 73.155 1.00 23.46 C
ATOM 18 C6 G B 885 64.627 100.514 73.088 1.00 23.41 C
ATOM 19 O6 G B 885 65.545 100.447 72.276 1.00 22.34 O
ATOM 20 N1 G B 885 64.559 99.594 74.119 1.00 25.20 N
ATOM 21 C2 G B 885 63.613 99.584 75.107 1.00 27.53 C
ATOM 22 N2 G B 885 63.718 98.606 76.012 1.00 29.70 N
ATOM 23 N3 G B 885 62.637 100.468 75.200 1.00 27.35 N
ATOM 24 C4 G B 885 62.677 101.369 74.196 1.00 25.29 C
ATOM 25 P C B 886 58.048 104.763 78.103 1.00 24.33 P
ATOM 26 OP1 C B 886 57.872 103.997 79.365 1.00 24.31 O
ATOM 27 OP2 C B 886 56.878 105.038 77.244 1.00 22.84 O
ATOM 28 O5' C B 886 58.717 106.162 78.452 1.00 27.18 O
TER
Atoms:
C2: (59.208,110.972,76.578)
OP1: (57.872,103.997,79.365)
OP2: (56.878,105.038,77.244)
C4: (58.564,109.910,74.606)
O5': (58.717,106.162,78.452)
C3': (58.508,108.700,79.961)
C1': (60.080,109.675,78.503)
O4': (60.498,108.351,78.773)
C5': (59.480,106.347,79.663)
P: (58.048,104.763,78.103)
O2: (59.377,111.990,77.258)
C4': (59.742,107.817,79.891)
C2': (59.077,110.062,79.588)
O2': (59.785,110.679,80.647)
N1: (59.532,109.723,77.134)
N3: (58.721,111.033,75.314)
N4: (58.107,110.016,73.356)
C6: (59.351,108.579,76.405)
C5: (58.878,108.625,75.149)
O3': (57.951,108.681,81.271)
OP1: (57.872,103.997,79.365)
OP2: (56.878,105.038,77.244)
C4: (58.564,109.910,74.606)
O5': (58.717,106.162,78.452)
C3': (58.508,108.700,79.961)
C1': (60.080,109.675,78.503)
O4': (60.498,108.351,78.773)
C5': (59.480,106.347,79.663)
P: (58.048,104.763,78.103)
O2: (59.377,111.990,77.258)
C4': (59.742,107.817,79.891)
C2': (59.077,110.062,79.588)
O2': (59.785,110.679,80.647)
N1: (59.532,109.723,77.134)
N3: (58.721,111.033,75.314)
N4: (58.107,110.016,73.356)
C6: (59.351,108.579,76.405)
C5: (58.878,108.625,75.149)
O3': (57.951,108.681,81.271)
OP1: (58.375,105.018,71.221)
OP2: (58.240,107.488,71.871)
C3': (59.423,104.508,75.912)
C1': (60.726,102.806,74.920)
C5': (57.805,104.547,73.917)
O6: (65.545,100.447,72.276)
O4': (59.533,102.879,74.184)
C8: (62.209,103.061,72.871)
C2: (63.613,99.584,75.107)
C6: (64.627,100.514,73.088)
C5: (63.571,101.452,73.155)
C4: (62.677,101.369,74.196)
P: (58.806,106.137,72.087)
C4': (58.594,103.723,74.897)
C2': (60.863,104.210,75.483)
O2': (61.809,104.213,76.528)
N1: (64.559,99.594,74.119)
N2: (63.718,98.606,76.012)
N3: (62.637,100.468,75.200)
N7: (63.254,102.512,72.318)
N9: (61.816,102.428,74.025)
O5': (58.519,105.740,73.595)
O3': (59.148,104.019,77.208)
OP2: (58.240,107.488,71.871)
C3': (59.423,104.508,75.912)
C1': (60.726,102.806,74.920)
C5': (57.805,104.547,73.917)
O6: (65.545,100.447,72.276)
O4': (59.533,102.879,74.184)
C8: (62.209,103.061,72.871)
C2: (63.613,99.584,75.107)
C6: (64.627,100.514,73.088)
C5: (63.571,101.452,73.155)
C4: (62.677,101.369,74.196)
P: (58.806,106.137,72.087)
C4': (58.594,103.723,74.897)
C2': (60.863,104.210,75.483)
O2': (61.809,104.213,76.528)
N1: (64.559,99.594,74.119)
N2: (63.718,98.606,76.012)
N3: (62.637,100.468,75.200)
N7: (63.254,102.512,72.318)
N9: (61.816,102.428,74.025)
O5': (58.519,105.740,73.595)
O3': (59.148,104.019,77.208)
Image (generated by PyMOL):