Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01398:01397
Extra
PDB:
ATOM 1 O3' G A1397 60.364 167.810 67.769 1.00 48.80 O
ATOM 2 P C A1398 59.122 167.490 66.808 1.00 49.42 P
ATOM 3 OP1 C A1398 59.484 166.241 66.105 1.00 49.07 O
ATOM 4 OP2 C A1398 58.800 168.703 66.021 1.00 50.11 O
ATOM 5 O5' C A1398 57.919 167.180 67.801 1.00 46.73 O
ATOM 6 C5' C A1398 57.726 165.865 68.346 1.00 47.96 C
ATOM 7 C4' C A1398 56.272 165.657 68.669 1.00 49.87 C
ATOM 8 O4' C A1398 55.857 166.622 69.670 1.00 50.39 O
ATOM 9 C3' C A1398 55.350 165.895 67.493 1.00 51.94 C
ATOM 10 O3' C A1398 55.250 164.719 66.705 1.00 56.99 O
ATOM 11 C2' C A1398 54.049 166.322 68.163 1.00 51.16 C
ATOM 12 O2' C A1398 53.290 165.243 68.676 1.00 50.65 O
ATOM 13 C1' C A1398 54.583 167.149 69.334 1.00 50.11 C
ATOM 14 N1 C A1398 54.765 168.584 69.054 1.00 49.65 N
ATOM 15 C2 C A1398 53.681 169.453 69.173 1.00 48.66 C
ATOM 16 O2 C A1398 52.571 168.994 69.473 1.00 47.90 O
ATOM 17 N3 C A1398 53.878 170.778 68.963 1.00 49.73 N
ATOM 18 C4 C A1398 55.100 171.236 68.654 1.00 50.35 C
ATOM 19 N4 C A1398 55.268 172.548 68.499 1.00 50.08 N
ATOM 20 C5 C A1398 56.208 170.369 68.502 1.00 50.80 C
ATOM 21 C6 C A1398 55.999 169.065 68.702 1.00 51.47 C
ATOM 22 P U A1399 55.192 164.838 65.105 1.00 61.40 P
ATOM 23 OP1 U A1399 55.167 163.455 64.551 1.00 57.95 O
ATOM 24 OP2 U A1399 56.256 165.791 64.663 1.00 60.15 O
ATOM 25 O5' U A1399 53.774 165.511 64.850 1.00 60.19 O
TER
ATOM 1 O3' A B1396 59.477 173.719 70.057 1.00 44.73 O
ATOM 2 P G B1397 59.333 173.210 68.545 1.00 47.83 P
ATOM 3 OP1 G B1397 60.347 173.883 67.707 1.00 48.50 O
ATOM 4 OP2 G B1397 57.895 173.262 68.158 1.00 48.30 O
ATOM 5 O5' G B1397 59.741 171.682 68.610 1.00 47.89 O
ATOM 6 C5' G B1397 61.093 171.300 68.838 1.00 48.71 C
ATOM 7 C4' G B1397 61.341 169.919 68.287 1.00 48.50 C
ATOM 8 O4' G B1397 62.585 169.434 68.850 1.00 48.66 O
ATOM 9 C3' G B1397 60.296 168.888 68.696 1.00 48.25 C
ATOM 10 O3' G B1397 60.364 167.810 67.769 1.00 48.80 O
ATOM 11 C2' G B1397 60.827 168.424 70.041 1.00 48.13 C
ATOM 12 O2' G B1397 60.286 167.178 70.433 1.00 45.96 O
ATOM 13 C1' G B1397 62.319 168.351 69.719 1.00 49.22 C
ATOM 14 N9 G B1397 63.265 168.398 70.831 1.00 49.59 N
ATOM 15 C8 G B1397 64.321 167.539 71.011 1.00 48.85 C
ATOM 16 N7 G B1397 65.016 167.797 72.078 1.00 49.06 N
ATOM 17 C5 G B1397 64.383 168.892 72.647 1.00 48.56 C
ATOM 18 C6 G B1397 64.690 169.608 73.829 1.00 48.11 C
ATOM 19 O6 G B1397 65.609 169.409 74.632 1.00 46.03 O
ATOM 20 N1 G B1397 63.796 170.652 74.039 1.00 48.60 N
ATOM 21 C2 G B1397 62.748 170.970 73.214 1.00 48.31 C
ATOM 22 N2 G B1397 62.011 172.028 73.587 1.00 46.17 N
ATOM 23 N3 G B1397 62.449 170.304 72.105 1.00 47.89 N
ATOM 24 C4 G B1397 63.302 169.283 71.887 1.00 48.06 C
ATOM 25 P C B1398 59.122 167.490 66.808 1.00 49.42 P
ATOM 26 OP1 C B1398 59.484 166.241 66.105 1.00 49.07 O
ATOM 27 OP2 C B1398 58.800 168.703 66.021 1.00 50.11 O
ATOM 28 O5' C B1398 57.919 167.180 67.801 1.00 46.73 O
TER
ATOM 2 P C A1398 59.122 167.490 66.808 1.00 49.42 P
ATOM 3 OP1 C A1398 59.484 166.241 66.105 1.00 49.07 O
ATOM 4 OP2 C A1398 58.800 168.703 66.021 1.00 50.11 O
ATOM 5 O5' C A1398 57.919 167.180 67.801 1.00 46.73 O
ATOM 6 C5' C A1398 57.726 165.865 68.346 1.00 47.96 C
ATOM 7 C4' C A1398 56.272 165.657 68.669 1.00 49.87 C
ATOM 8 O4' C A1398 55.857 166.622 69.670 1.00 50.39 O
ATOM 9 C3' C A1398 55.350 165.895 67.493 1.00 51.94 C
ATOM 10 O3' C A1398 55.250 164.719 66.705 1.00 56.99 O
ATOM 11 C2' C A1398 54.049 166.322 68.163 1.00 51.16 C
ATOM 12 O2' C A1398 53.290 165.243 68.676 1.00 50.65 O
ATOM 13 C1' C A1398 54.583 167.149 69.334 1.00 50.11 C
ATOM 14 N1 C A1398 54.765 168.584 69.054 1.00 49.65 N
ATOM 15 C2 C A1398 53.681 169.453 69.173 1.00 48.66 C
ATOM 16 O2 C A1398 52.571 168.994 69.473 1.00 47.90 O
ATOM 17 N3 C A1398 53.878 170.778 68.963 1.00 49.73 N
ATOM 18 C4 C A1398 55.100 171.236 68.654 1.00 50.35 C
ATOM 19 N4 C A1398 55.268 172.548 68.499 1.00 50.08 N
ATOM 20 C5 C A1398 56.208 170.369 68.502 1.00 50.80 C
ATOM 21 C6 C A1398 55.999 169.065 68.702 1.00 51.47 C
ATOM 22 P U A1399 55.192 164.838 65.105 1.00 61.40 P
ATOM 23 OP1 U A1399 55.167 163.455 64.551 1.00 57.95 O
ATOM 24 OP2 U A1399 56.256 165.791 64.663 1.00 60.15 O
ATOM 25 O5' U A1399 53.774 165.511 64.850 1.00 60.19 O
TER
ATOM 1 O3' A B1396 59.477 173.719 70.057 1.00 44.73 O
ATOM 2 P G B1397 59.333 173.210 68.545 1.00 47.83 P
ATOM 3 OP1 G B1397 60.347 173.883 67.707 1.00 48.50 O
ATOM 4 OP2 G B1397 57.895 173.262 68.158 1.00 48.30 O
ATOM 5 O5' G B1397 59.741 171.682 68.610 1.00 47.89 O
ATOM 6 C5' G B1397 61.093 171.300 68.838 1.00 48.71 C
ATOM 7 C4' G B1397 61.341 169.919 68.287 1.00 48.50 C
ATOM 8 O4' G B1397 62.585 169.434 68.850 1.00 48.66 O
ATOM 9 C3' G B1397 60.296 168.888 68.696 1.00 48.25 C
ATOM 10 O3' G B1397 60.364 167.810 67.769 1.00 48.80 O
ATOM 11 C2' G B1397 60.827 168.424 70.041 1.00 48.13 C
ATOM 12 O2' G B1397 60.286 167.178 70.433 1.00 45.96 O
ATOM 13 C1' G B1397 62.319 168.351 69.719 1.00 49.22 C
ATOM 14 N9 G B1397 63.265 168.398 70.831 1.00 49.59 N
ATOM 15 C8 G B1397 64.321 167.539 71.011 1.00 48.85 C
ATOM 16 N7 G B1397 65.016 167.797 72.078 1.00 49.06 N
ATOM 17 C5 G B1397 64.383 168.892 72.647 1.00 48.56 C
ATOM 18 C6 G B1397 64.690 169.608 73.829 1.00 48.11 C
ATOM 19 O6 G B1397 65.609 169.409 74.632 1.00 46.03 O
ATOM 20 N1 G B1397 63.796 170.652 74.039 1.00 48.60 N
ATOM 21 C2 G B1397 62.748 170.970 73.214 1.00 48.31 C
ATOM 22 N2 G B1397 62.011 172.028 73.587 1.00 46.17 N
ATOM 23 N3 G B1397 62.449 170.304 72.105 1.00 47.89 N
ATOM 24 C4 G B1397 63.302 169.283 71.887 1.00 48.06 C
ATOM 25 P C B1398 59.122 167.490 66.808 1.00 49.42 P
ATOM 26 OP1 C B1398 59.484 166.241 66.105 1.00 49.07 O
ATOM 27 OP2 C B1398 58.800 168.703 66.021 1.00 50.11 O
ATOM 28 O5' C B1398 57.919 167.180 67.801 1.00 46.73 O
TER
Atoms:
C2: (53.681,169.453,69.173)
OP1: (59.484,166.241,66.105)
OP2: (58.800,168.703,66.021)
C4: (55.100,171.236,68.654)
O5': (57.919,167.180,67.801)
C3': (55.350,165.895,67.493)
C1': (54.583,167.149,69.334)
O4': (55.857,166.622,69.670)
C5': (57.726,165.865,68.346)
P: (59.122,167.490,66.808)
O2: (52.571,168.994,69.473)
C4': (56.272,165.657,68.669)
C2': (54.049,166.322,68.163)
O2': (53.290,165.243,68.676)
N1: (54.765,168.584,69.054)
N3: (53.878,170.778,68.963)
N4: (55.268,172.548,68.499)
C6: (55.999,169.065,68.702)
C5: (56.208,170.369,68.502)
O3': (55.250,164.719,66.705)
OP1: (59.484,166.241,66.105)
OP2: (58.800,168.703,66.021)
C4: (55.100,171.236,68.654)
O5': (57.919,167.180,67.801)
C3': (55.350,165.895,67.493)
C1': (54.583,167.149,69.334)
O4': (55.857,166.622,69.670)
C5': (57.726,165.865,68.346)
P: (59.122,167.490,66.808)
O2: (52.571,168.994,69.473)
C4': (56.272,165.657,68.669)
C2': (54.049,166.322,68.163)
O2': (53.290,165.243,68.676)
N1: (54.765,168.584,69.054)
N3: (53.878,170.778,68.963)
N4: (55.268,172.548,68.499)
C6: (55.999,169.065,68.702)
C5: (56.208,170.369,68.502)
O3': (55.250,164.719,66.705)
OP1: (60.347,173.883,67.707)
OP2: (57.895,173.262,68.158)
C3': (60.296,168.888,68.696)
C1': (62.319,168.351,69.719)
C5': (61.093,171.300,68.838)
O6: (65.609,169.409,74.632)
O4': (62.585,169.434,68.850)
C8: (64.321,167.539,71.011)
C2: (62.748,170.970,73.214)
C6: (64.690,169.608,73.829)
C5: (64.383,168.892,72.647)
C4: (63.302,169.283,71.887)
P: (59.333,173.210,68.545)
C4': (61.341,169.919,68.287)
C2': (60.827,168.424,70.041)
O2': (60.286,167.178,70.433)
N1: (63.796,170.652,74.039)
N2: (62.011,172.028,73.587)
N3: (62.449,170.304,72.105)
N7: (65.016,167.797,72.078)
N9: (63.265,168.398,70.831)
O5': (59.741,171.682,68.610)
O3': (60.364,167.810,67.769)
OP2: (57.895,173.262,68.158)
C3': (60.296,168.888,68.696)
C1': (62.319,168.351,69.719)
C5': (61.093,171.300,68.838)
O6: (65.609,169.409,74.632)
O4': (62.585,169.434,68.850)
C8: (64.321,167.539,71.011)
C2: (62.748,170.970,73.214)
C6: (64.690,169.608,73.829)
C5: (64.383,168.892,72.647)
C4: (63.302,169.283,71.887)
P: (59.333,173.210,68.545)
C4': (61.341,169.919,68.287)
C2': (60.827,168.424,70.041)
O2': (60.286,167.178,70.433)
N1: (63.796,170.652,74.039)
N2: (62.011,172.028,73.587)
N3: (62.449,170.304,72.105)
N7: (65.016,167.797,72.078)
N9: (63.265,168.398,70.831)
O5': (59.741,171.682,68.610)
O3': (60.364,167.810,67.769)
Image (generated by PyMOL):