Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0886:0885
Extra
PDB:
ATOM 1 O3' G A 885 59.146 104.197 77.271 1.00 28.23 O
ATOM 2 P C A 886 58.004 104.910 78.129 1.00 28.64 P
ATOM 3 OP1 C A 886 57.838 104.143 79.385 1.00 29.41 O
ATOM 4 OP2 C A 886 56.852 105.107 77.230 1.00 27.35 O
ATOM 5 O5' C A 886 58.604 106.339 78.471 1.00 30.47 O
ATOM 6 C5' C A 886 59.444 106.532 79.625 1.00 31.55 C
ATOM 7 C4' C A 886 59.690 108.004 79.849 1.00 31.66 C
ATOM 8 O4' C A 886 60.433 108.546 78.728 1.00 31.73 O
ATOM 9 C3' C A 886 58.450 108.876 79.916 1.00 31.18 C
ATOM 10 O3' C A 886 57.856 108.841 81.209 1.00 30.61 O
ATOM 11 C2' C A 886 59.023 110.242 79.581 1.00 30.93 C
ATOM 12 O2' C A 886 59.718 110.796 80.684 1.00 28.86 O
ATOM 13 C1' C A 886 60.027 109.879 78.486 1.00 30.24 C
ATOM 14 N1 C A 886 59.493 109.960 77.111 1.00 30.32 N
ATOM 15 C2 C A 886 59.164 111.221 76.578 1.00 31.02 C
ATOM 16 O2 C A 886 59.326 112.227 77.271 1.00 31.12 O
ATOM 17 N3 C A 886 58.682 111.304 75.317 1.00 31.20 N
ATOM 18 C4 C A 886 58.536 110.198 74.585 1.00 31.53 C
ATOM 19 N4 C A 886 58.074 110.332 73.342 1.00 30.57 N
ATOM 20 C5 C A 886 58.860 108.904 75.097 1.00 31.76 C
ATOM 21 C6 C A 886 59.326 108.832 76.354 1.00 30.62 C
ATOM 22 P U A 887 56.271 108.637 81.354 1.00 30.53 P
ATOM 23 OP1 U A 887 56.054 108.081 82.709 1.00 26.66 O
ATOM 24 OP2 U A 887 55.787 107.887 80.161 1.00 29.12 O
ATOM 25 O5' U A 887 55.692 110.119 81.339 1.00 29.84 O
TER
ATOM 1 O3' A B 884 60.382 106.390 72.086 1.00 34.59 O
ATOM 2 P G B 885 58.780 106.291 72.135 1.00 34.22 P
ATOM 3 OP1 G B 885 58.361 105.141 71.298 1.00 32.00 O
ATOM 4 OP2 G B 885 58.228 107.638 71.864 1.00 32.37 O
ATOM 5 O5' G B 885 58.492 105.962 73.660 1.00 31.90 O
ATOM 6 C5' G B 885 57.740 104.812 74.038 1.00 30.45 C
ATOM 7 C4' G B 885 58.545 103.949 74.973 1.00 28.24 C
ATOM 8 O4' G B 885 59.426 103.079 74.223 1.00 27.95 O
ATOM 9 C3' G B 885 59.426 104.679 75.982 1.00 28.05 C
ATOM 10 O3' G B 885 59.146 104.197 77.271 1.00 28.23 O
ATOM 11 C2' G B 885 60.843 104.297 75.556 1.00 29.26 C
ATOM 12 O2' G B 885 61.756 104.213 76.631 1.00 28.85 O
ATOM 13 C1' G B 885 60.623 102.922 74.940 1.00 28.99 C
ATOM 14 N9 G B 885 61.685 102.552 74.009 1.00 30.62 N
ATOM 15 C8 G B 885 61.991 103.154 72.813 1.00 30.85 C
ATOM 16 N7 G B 885 63.035 102.631 72.230 1.00 29.85 N
ATOM 17 C5 G B 885 63.440 101.623 73.090 1.00 30.08 C
ATOM 18 C6 G B 885 64.529 100.739 73.004 1.00 30.36 C
ATOM 19 O6 G B 885 65.392 100.678 72.138 1.00 33.26 O
ATOM 20 N1 G B 885 64.568 99.863 74.075 1.00 31.70 N
ATOM 21 C2 G B 885 63.675 99.845 75.110 1.00 34.55 C
ATOM 22 N2 G B 885 63.878 98.910 76.055 1.00 35.90 N
ATOM 23 N3 G B 885 62.656 100.682 75.216 1.00 33.92 N
ATOM 24 C4 G B 885 62.603 101.542 74.178 1.00 31.29 C
ATOM 25 P C B 886 58.004 104.910 78.129 1.00 28.64 P
ATOM 26 OP1 C B 886 57.838 104.143 79.385 1.00 29.41 O
ATOM 27 OP2 C B 886 56.852 105.107 77.230 1.00 27.35 O
ATOM 28 O5' C B 886 58.604 106.339 78.471 1.00 30.47 O
TER
ATOM 2 P C A 886 58.004 104.910 78.129 1.00 28.64 P
ATOM 3 OP1 C A 886 57.838 104.143 79.385 1.00 29.41 O
ATOM 4 OP2 C A 886 56.852 105.107 77.230 1.00 27.35 O
ATOM 5 O5' C A 886 58.604 106.339 78.471 1.00 30.47 O
ATOM 6 C5' C A 886 59.444 106.532 79.625 1.00 31.55 C
ATOM 7 C4' C A 886 59.690 108.004 79.849 1.00 31.66 C
ATOM 8 O4' C A 886 60.433 108.546 78.728 1.00 31.73 O
ATOM 9 C3' C A 886 58.450 108.876 79.916 1.00 31.18 C
ATOM 10 O3' C A 886 57.856 108.841 81.209 1.00 30.61 O
ATOM 11 C2' C A 886 59.023 110.242 79.581 1.00 30.93 C
ATOM 12 O2' C A 886 59.718 110.796 80.684 1.00 28.86 O
ATOM 13 C1' C A 886 60.027 109.879 78.486 1.00 30.24 C
ATOM 14 N1 C A 886 59.493 109.960 77.111 1.00 30.32 N
ATOM 15 C2 C A 886 59.164 111.221 76.578 1.00 31.02 C
ATOM 16 O2 C A 886 59.326 112.227 77.271 1.00 31.12 O
ATOM 17 N3 C A 886 58.682 111.304 75.317 1.00 31.20 N
ATOM 18 C4 C A 886 58.536 110.198 74.585 1.00 31.53 C
ATOM 19 N4 C A 886 58.074 110.332 73.342 1.00 30.57 N
ATOM 20 C5 C A 886 58.860 108.904 75.097 1.00 31.76 C
ATOM 21 C6 C A 886 59.326 108.832 76.354 1.00 30.62 C
ATOM 22 P U A 887 56.271 108.637 81.354 1.00 30.53 P
ATOM 23 OP1 U A 887 56.054 108.081 82.709 1.00 26.66 O
ATOM 24 OP2 U A 887 55.787 107.887 80.161 1.00 29.12 O
ATOM 25 O5' U A 887 55.692 110.119 81.339 1.00 29.84 O
TER
ATOM 1 O3' A B 884 60.382 106.390 72.086 1.00 34.59 O
ATOM 2 P G B 885 58.780 106.291 72.135 1.00 34.22 P
ATOM 3 OP1 G B 885 58.361 105.141 71.298 1.00 32.00 O
ATOM 4 OP2 G B 885 58.228 107.638 71.864 1.00 32.37 O
ATOM 5 O5' G B 885 58.492 105.962 73.660 1.00 31.90 O
ATOM 6 C5' G B 885 57.740 104.812 74.038 1.00 30.45 C
ATOM 7 C4' G B 885 58.545 103.949 74.973 1.00 28.24 C
ATOM 8 O4' G B 885 59.426 103.079 74.223 1.00 27.95 O
ATOM 9 C3' G B 885 59.426 104.679 75.982 1.00 28.05 C
ATOM 10 O3' G B 885 59.146 104.197 77.271 1.00 28.23 O
ATOM 11 C2' G B 885 60.843 104.297 75.556 1.00 29.26 C
ATOM 12 O2' G B 885 61.756 104.213 76.631 1.00 28.85 O
ATOM 13 C1' G B 885 60.623 102.922 74.940 1.00 28.99 C
ATOM 14 N9 G B 885 61.685 102.552 74.009 1.00 30.62 N
ATOM 15 C8 G B 885 61.991 103.154 72.813 1.00 30.85 C
ATOM 16 N7 G B 885 63.035 102.631 72.230 1.00 29.85 N
ATOM 17 C5 G B 885 63.440 101.623 73.090 1.00 30.08 C
ATOM 18 C6 G B 885 64.529 100.739 73.004 1.00 30.36 C
ATOM 19 O6 G B 885 65.392 100.678 72.138 1.00 33.26 O
ATOM 20 N1 G B 885 64.568 99.863 74.075 1.00 31.70 N
ATOM 21 C2 G B 885 63.675 99.845 75.110 1.00 34.55 C
ATOM 22 N2 G B 885 63.878 98.910 76.055 1.00 35.90 N
ATOM 23 N3 G B 885 62.656 100.682 75.216 1.00 33.92 N
ATOM 24 C4 G B 885 62.603 101.542 74.178 1.00 31.29 C
ATOM 25 P C B 886 58.004 104.910 78.129 1.00 28.64 P
ATOM 26 OP1 C B 886 57.838 104.143 79.385 1.00 29.41 O
ATOM 27 OP2 C B 886 56.852 105.107 77.230 1.00 27.35 O
ATOM 28 O5' C B 886 58.604 106.339 78.471 1.00 30.47 O
TER
Atoms:
C2: (59.164,111.221,76.578)
OP1: (57.838,104.143,79.385)
OP2: (56.852,105.107,77.230)
C4: (58.536,110.198,74.585)
O5': (58.604,106.339,78.471)
C3': (58.450,108.876,79.916)
C1': (60.027,109.879,78.486)
O4': (60.433,108.546,78.728)
C5': (59.444,106.532,79.625)
P: (58.004,104.910,78.129)
O2: (59.326,112.227,77.271)
C4': (59.690,108.004,79.849)
C2': (59.023,110.242,79.581)
O2': (59.718,110.796,80.684)
N1: (59.493,109.960,77.111)
N3: (58.682,111.304,75.317)
N4: (58.074,110.332,73.342)
C6: (59.326,108.832,76.354)
C5: (58.860,108.904,75.097)
O3': (57.856,108.841,81.209)
OP1: (57.838,104.143,79.385)
OP2: (56.852,105.107,77.230)
C4: (58.536,110.198,74.585)
O5': (58.604,106.339,78.471)
C3': (58.450,108.876,79.916)
C1': (60.027,109.879,78.486)
O4': (60.433,108.546,78.728)
C5': (59.444,106.532,79.625)
P: (58.004,104.910,78.129)
O2: (59.326,112.227,77.271)
C4': (59.690,108.004,79.849)
C2': (59.023,110.242,79.581)
O2': (59.718,110.796,80.684)
N1: (59.493,109.960,77.111)
N3: (58.682,111.304,75.317)
N4: (58.074,110.332,73.342)
C6: (59.326,108.832,76.354)
C5: (58.860,108.904,75.097)
O3': (57.856,108.841,81.209)
OP1: (58.361,105.141,71.298)
OP2: (58.228,107.638,71.864)
C3': (59.426,104.679,75.982)
C1': (60.623,102.922,74.940)
C5': (57.740,104.812,74.038)
O6: (65.392,100.678,72.138)
O4': (59.426,103.079,74.223)
C8: (61.991,103.154,72.813)
C2: (63.675,99.845,75.110)
C6: (64.529,100.739,73.004)
C5: (63.440,101.623,73.090)
C4: (62.603,101.542,74.178)
P: (58.780,106.291,72.135)
C4': (58.545,103.949,74.973)
C2': (60.843,104.297,75.556)
O2': (61.756,104.213,76.631)
N1: (64.568,99.863,74.075)
N2: (63.878,98.910,76.055)
N3: (62.656,100.682,75.216)
N7: (63.035,102.631,72.230)
N9: (61.685,102.552,74.009)
O5': (58.492,105.962,73.660)
O3': (59.146,104.197,77.271)
OP2: (58.228,107.638,71.864)
C3': (59.426,104.679,75.982)
C1': (60.623,102.922,74.940)
C5': (57.740,104.812,74.038)
O6: (65.392,100.678,72.138)
O4': (59.426,103.079,74.223)
C8: (61.991,103.154,72.813)
C2: (63.675,99.845,75.110)
C6: (64.529,100.739,73.004)
C5: (63.440,101.623,73.090)
C4: (62.603,101.542,74.178)
P: (58.780,106.291,72.135)
C4': (58.545,103.949,74.973)
C2': (60.843,104.297,75.556)
O2': (61.756,104.213,76.631)
N1: (64.568,99.863,74.075)
N2: (63.878,98.910,76.055)
N3: (62.656,100.682,75.216)
N7: (63.035,102.631,72.230)
N9: (61.685,102.552,74.009)
O5': (58.492,105.962,73.660)
O3': (59.146,104.197,77.271)
Image (generated by PyMOL):