Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y63:Y62
Extra
PDB:
ATOM 1 O3' G A 62 10.168 15.621 54.192 1.00 42.82 O
ATOM 2 P C A 63 11.139 15.439 52.932 1.00 41.92 P
ATOM 3 OP1 C A 63 10.520 14.419 52.056 1.00 42.32 O
ATOM 4 OP2 C A 63 12.518 15.251 53.434 1.00 42.56 O
ATOM 5 O5' C A 63 11.071 16.849 52.188 1.00 39.81 O
ATOM 6 C5' C A 63 12.256 17.475 51.721 1.00 36.50 C
ATOM 7 C4' C A 63 12.100 18.979 51.825 1.00 34.30 C
ATOM 8 O4' C A 63 10.813 19.367 51.277 1.00 33.08 O
ATOM 9 C3' C A 63 12.073 19.510 53.249 1.00 33.22 C
ATOM 10 O3' C A 63 13.402 19.698 53.718 1.00 32.70 O
ATOM 11 C2' C A 63 11.328 20.828 53.058 1.00 32.57 C
ATOM 12 O2' C A 63 12.158 21.848 52.538 1.00 32.29 O
ATOM 13 C1' C A 63 10.272 20.443 52.024 1.00 31.95 C
ATOM 14 N1 C A 63 8.968 20.014 52.620 1.00 30.83 N
ATOM 15 C2 C A 63 8.159 20.948 53.282 1.00 30.26 C
ATOM 16 O2 C A 63 8.529 22.124 53.363 1.00 29.14 O
ATOM 17 N3 C A 63 6.983 20.536 53.818 1.00 30.08 N
ATOM 18 C4 C A 63 6.610 19.258 53.713 1.00 30.45 C
ATOM 19 N4 C A 63 5.444 18.898 54.260 1.00 30.82 N
ATOM 20 C5 C A 63 7.419 18.294 53.043 1.00 30.46 C
ATOM 21 C6 C A 63 8.575 18.711 52.518 1.00 30.67 C
ATOM 22 P C A 64 13.752 19.556 55.275 1.00 32.93 P
ATOM 23 OP1 C A 64 15.225 19.633 55.401 1.00 32.75 O
ATOM 24 OP2 C A 64 13.014 18.395 55.821 1.00 32.97 O
ATOM 25 O5' C A 64 13.106 20.868 55.914 1.00 32.01 O
TER
ATOM 1 O3' U B 61 4.875 14.428 52.498 1.00 33.04 O
ATOM 2 P G B 62 5.040 14.960 53.999 1.00 35.32 P
ATOM 3 OP1 G B 62 4.569 13.886 54.901 1.00 36.12 O
ATOM 4 OP2 G B 62 4.434 16.304 54.080 1.00 35.22 O
ATOM 5 O5' G B 62 6.624 15.124 54.168 1.00 37.88 O
ATOM 6 C5' G B 62 7.168 15.521 55.425 1.00 41.08 C
ATOM 7 C4' G B 62 8.461 14.786 55.737 1.00 43.16 C
ATOM 8 O4' G B 62 8.169 13.460 56.252 1.00 44.76 O
ATOM 9 C3' G B 62 9.370 14.504 54.551 1.00 43.71 C
ATOM 10 O3' G B 62 10.168 15.621 54.192 1.00 42.82 O
ATOM 11 C2' G B 62 10.240 13.400 55.131 1.00 44.80 C
ATOM 12 O2' G B 62 11.198 13.899 56.045 1.00 45.69 O
ATOM 13 C1' G B 62 9.193 12.562 55.855 1.00 45.56 C
ATOM 14 N9 G B 62 8.629 11.521 54.999 1.00 46.35 N
ATOM 15 C8 G B 62 7.342 11.439 54.523 1.00 46.76 C
ATOM 16 N7 G B 62 7.131 10.394 53.771 1.00 46.95 N
ATOM 17 C5 G B 62 8.358 9.743 53.741 1.00 47.06 C
ATOM 18 C6 G B 62 8.742 8.549 53.084 1.00 47.07 C
ATOM 19 O6 G B 62 8.046 7.809 52.376 1.00 46.86 O
ATOM 20 N1 G B 62 10.081 8.237 53.313 1.00 47.27 N
ATOM 21 C2 G B 62 10.941 8.988 54.081 1.00 47.10 C
ATOM 22 N2 G B 62 12.199 8.535 54.191 1.00 46.71 N
ATOM 23 N3 G B 62 10.591 10.107 54.703 1.00 47.03 N
ATOM 24 C4 G B 62 9.291 10.425 54.489 1.00 46.76 C
ATOM 25 P C B 63 11.139 15.439 52.932 1.00 41.92 P
ATOM 26 OP1 C B 63 10.520 14.419 52.056 1.00 42.32 O
ATOM 27 OP2 C B 63 12.518 15.251 53.434 1.00 42.56 O
ATOM 28 O5' C B 63 11.071 16.849 52.188 1.00 39.81 O
TER
ATOM 2 P C A 63 11.139 15.439 52.932 1.00 41.92 P
ATOM 3 OP1 C A 63 10.520 14.419 52.056 1.00 42.32 O
ATOM 4 OP2 C A 63 12.518 15.251 53.434 1.00 42.56 O
ATOM 5 O5' C A 63 11.071 16.849 52.188 1.00 39.81 O
ATOM 6 C5' C A 63 12.256 17.475 51.721 1.00 36.50 C
ATOM 7 C4' C A 63 12.100 18.979 51.825 1.00 34.30 C
ATOM 8 O4' C A 63 10.813 19.367 51.277 1.00 33.08 O
ATOM 9 C3' C A 63 12.073 19.510 53.249 1.00 33.22 C
ATOM 10 O3' C A 63 13.402 19.698 53.718 1.00 32.70 O
ATOM 11 C2' C A 63 11.328 20.828 53.058 1.00 32.57 C
ATOM 12 O2' C A 63 12.158 21.848 52.538 1.00 32.29 O
ATOM 13 C1' C A 63 10.272 20.443 52.024 1.00 31.95 C
ATOM 14 N1 C A 63 8.968 20.014 52.620 1.00 30.83 N
ATOM 15 C2 C A 63 8.159 20.948 53.282 1.00 30.26 C
ATOM 16 O2 C A 63 8.529 22.124 53.363 1.00 29.14 O
ATOM 17 N3 C A 63 6.983 20.536 53.818 1.00 30.08 N
ATOM 18 C4 C A 63 6.610 19.258 53.713 1.00 30.45 C
ATOM 19 N4 C A 63 5.444 18.898 54.260 1.00 30.82 N
ATOM 20 C5 C A 63 7.419 18.294 53.043 1.00 30.46 C
ATOM 21 C6 C A 63 8.575 18.711 52.518 1.00 30.67 C
ATOM 22 P C A 64 13.752 19.556 55.275 1.00 32.93 P
ATOM 23 OP1 C A 64 15.225 19.633 55.401 1.00 32.75 O
ATOM 24 OP2 C A 64 13.014 18.395 55.821 1.00 32.97 O
ATOM 25 O5' C A 64 13.106 20.868 55.914 1.00 32.01 O
TER
ATOM 1 O3' U B 61 4.875 14.428 52.498 1.00 33.04 O
ATOM 2 P G B 62 5.040 14.960 53.999 1.00 35.32 P
ATOM 3 OP1 G B 62 4.569 13.886 54.901 1.00 36.12 O
ATOM 4 OP2 G B 62 4.434 16.304 54.080 1.00 35.22 O
ATOM 5 O5' G B 62 6.624 15.124 54.168 1.00 37.88 O
ATOM 6 C5' G B 62 7.168 15.521 55.425 1.00 41.08 C
ATOM 7 C4' G B 62 8.461 14.786 55.737 1.00 43.16 C
ATOM 8 O4' G B 62 8.169 13.460 56.252 1.00 44.76 O
ATOM 9 C3' G B 62 9.370 14.504 54.551 1.00 43.71 C
ATOM 10 O3' G B 62 10.168 15.621 54.192 1.00 42.82 O
ATOM 11 C2' G B 62 10.240 13.400 55.131 1.00 44.80 C
ATOM 12 O2' G B 62 11.198 13.899 56.045 1.00 45.69 O
ATOM 13 C1' G B 62 9.193 12.562 55.855 1.00 45.56 C
ATOM 14 N9 G B 62 8.629 11.521 54.999 1.00 46.35 N
ATOM 15 C8 G B 62 7.342 11.439 54.523 1.00 46.76 C
ATOM 16 N7 G B 62 7.131 10.394 53.771 1.00 46.95 N
ATOM 17 C5 G B 62 8.358 9.743 53.741 1.00 47.06 C
ATOM 18 C6 G B 62 8.742 8.549 53.084 1.00 47.07 C
ATOM 19 O6 G B 62 8.046 7.809 52.376 1.00 46.86 O
ATOM 20 N1 G B 62 10.081 8.237 53.313 1.00 47.27 N
ATOM 21 C2 G B 62 10.941 8.988 54.081 1.00 47.10 C
ATOM 22 N2 G B 62 12.199 8.535 54.191 1.00 46.71 N
ATOM 23 N3 G B 62 10.591 10.107 54.703 1.00 47.03 N
ATOM 24 C4 G B 62 9.291 10.425 54.489 1.00 46.76 C
ATOM 25 P C B 63 11.139 15.439 52.932 1.00 41.92 P
ATOM 26 OP1 C B 63 10.520 14.419 52.056 1.00 42.32 O
ATOM 27 OP2 C B 63 12.518 15.251 53.434 1.00 42.56 O
ATOM 28 O5' C B 63 11.071 16.849 52.188 1.00 39.81 O
TER
Atoms:
C2: (8.159,20.948,53.282)
OP1: (10.520,14.419,52.056)
OP2: (12.518,15.251,53.434)
C4: (6.610,19.258,53.713)
O5': (11.071,16.849,52.188)
C3': (12.073,19.510,53.249)
C1': (10.272,20.443,52.024)
O4': (10.813,19.367,51.277)
C5': (12.256,17.475,51.721)
P: (11.139,15.439,52.932)
O2: (8.529,22.124,53.363)
C4': (12.100,18.979,51.825)
C2': (11.328,20.828,53.058)
O2': (12.158,21.848,52.538)
N1: (8.968,20.014,52.620)
N3: (6.983,20.536,53.818)
N4: (5.444,18.898,54.260)
C6: (8.575,18.711,52.518)
C5: (7.419,18.294,53.043)
O3': (13.402,19.698,53.718)
OP1: (10.520,14.419,52.056)
OP2: (12.518,15.251,53.434)
C4: (6.610,19.258,53.713)
O5': (11.071,16.849,52.188)
C3': (12.073,19.510,53.249)
C1': (10.272,20.443,52.024)
O4': (10.813,19.367,51.277)
C5': (12.256,17.475,51.721)
P: (11.139,15.439,52.932)
O2: (8.529,22.124,53.363)
C4': (12.100,18.979,51.825)
C2': (11.328,20.828,53.058)
O2': (12.158,21.848,52.538)
N1: (8.968,20.014,52.620)
N3: (6.983,20.536,53.818)
N4: (5.444,18.898,54.260)
C6: (8.575,18.711,52.518)
C5: (7.419,18.294,53.043)
O3': (13.402,19.698,53.718)
OP1: (4.569,13.886,54.901)
OP2: (4.434,16.304,54.080)
C3': (9.370,14.504,54.551)
C1': (9.193,12.562,55.855)
C5': (7.168,15.521,55.425)
O6: (8.046,7.809,52.376)
O4': (8.169,13.460,56.252)
C8: (7.342,11.439,54.523)
C2: (10.941,8.988,54.081)
C6: (8.742,8.549,53.084)
C5: (8.358,9.743,53.741)
C4: (9.291,10.425,54.489)
P: (5.040,14.960,53.999)
C4': (8.461,14.786,55.737)
C2': (10.240,13.400,55.131)
O2': (11.198,13.899,56.045)
N1: (10.081,8.237,53.313)
N2: (12.199,8.535,54.191)
N3: (10.591,10.107,54.703)
N7: (7.131,10.394,53.771)
N9: (8.629,11.521,54.999)
O5': (6.624,15.124,54.168)
O3': (10.168,15.621,54.192)
OP2: (4.434,16.304,54.080)
C3': (9.370,14.504,54.551)
C1': (9.193,12.562,55.855)
C5': (7.168,15.521,55.425)
O6: (8.046,7.809,52.376)
O4': (8.169,13.460,56.252)
C8: (7.342,11.439,54.523)
C2: (10.941,8.988,54.081)
C6: (8.742,8.549,53.084)
C5: (8.358,9.743,53.741)
C4: (9.291,10.425,54.489)
P: (5.040,14.960,53.999)
C4': (8.461,14.786,55.737)
C2': (10.240,13.400,55.131)
O2': (11.198,13.899,56.045)
N1: (10.081,8.237,53.313)
N2: (12.199,8.535,54.191)
N3: (10.591,10.107,54.703)
N7: (7.131,10.394,53.771)
N9: (8.629,11.521,54.999)
O5': (6.624,15.124,54.168)
O3': (10.168,15.621,54.192)
Image (generated by PyMOL):