Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0331:0329
Extra
PDB:
ATOM 1 O3' C A 330 14.824 144.547 29.229 1.00 53.56 O
ATOM 2 P C A 331 15.772 143.856 28.132 1.00 54.34 P
ATOM 3 OP1 C A 331 15.720 144.653 26.880 1.00 53.92 O
ATOM 4 OP2 C A 331 15.408 142.414 28.100 1.00 55.10 O
ATOM 5 O5' C A 331 17.232 144.015 28.747 1.00 54.05 O
ATOM 6 C5' C A 331 17.820 145.327 28.909 1.00 52.41 C
ATOM 7 C4' C A 331 19.173 145.229 29.574 1.00 50.10 C
ATOM 8 O4' C A 331 19.031 144.896 30.983 1.00 50.37 O
ATOM 9 C3' C A 331 20.082 144.147 29.030 1.00 47.96 C
ATOM 10 O3' C A 331 20.722 144.534 27.836 1.00 45.35 O
ATOM 11 C2' C A 331 21.053 143.936 30.180 1.00 49.97 C
ATOM 12 O2' C A 331 22.068 144.919 30.249 1.00 50.09 O
ATOM 13 C1' C A 331 20.114 144.062 31.384 1.00 51.91 C
ATOM 14 N1 C A 331 19.579 142.747 31.812 1.00 53.94 N
ATOM 15 C2 C A 331 20.450 141.825 32.417 1.00 54.41 C
ATOM 16 O2 C A 331 21.636 142.142 32.599 1.00 54.68 O
ATOM 17 N3 C A 331 19.976 140.615 32.787 1.00 54.32 N
ATOM 18 C4 C A 331 18.694 140.312 32.590 1.00 54.40 C
ATOM 19 N4 C A 331 18.271 139.112 32.985 1.00 54.36 N
ATOM 20 C5 C A 331 17.787 141.226 31.985 1.00 54.59 C
ATOM 21 C6 C A 331 18.265 142.420 31.616 1.00 54.71 C
ATOM 22 P C A 332 21.300 143.407 26.855 1.00 46.24 P
ATOM 23 OP1 C A 332 21.775 144.085 25.630 1.00 47.82 O
ATOM 24 OP2 C A 332 20.309 142.317 26.746 1.00 46.73 O
ATOM 25 O5' C A 332 22.570 142.836 27.621 1.00 48.01 O
TER
ATOM 1 O3' A B 328 15.745 134.722 31.516 1.00 53.94 O
ATOM 2 P C B 329 15.159 136.085 32.127 1.00 54.55 P
ATOM 3 OP1 C B 329 16.247 137.092 32.142 1.00 53.20 O
ATOM 4 OP2 C B 329 14.451 135.754 33.382 1.00 54.82 O
ATOM 5 O5' C B 329 14.068 136.532 31.059 1.00 56.95 O
ATOM 6 C5' C B 329 14.444 136.816 29.696 1.00 57.80 C
ATOM 7 C4' C B 329 13.218 137.108 28.861 1.00 57.43 C
ATOM 8 O4' C B 329 12.454 135.894 28.652 1.00 57.60 O
ATOM 9 C3' C B 329 12.220 138.089 29.455 1.00 56.55 C
ATOM 10 O3' C B 329 12.640 139.430 29.222 1.00 53.70 O
ATOM 11 C2' C B 329 10.935 137.732 28.720 1.00 57.57 C
ATOM 12 O2' C B 329 10.885 138.293 27.426 1.00 58.33 O
ATOM 13 C1' C B 329 11.075 136.215 28.580 1.00 58.24 C
ATOM 14 N1 C B 329 10.343 135.432 29.590 1.00 58.64 N
ATOM 15 C2 C B 329 8.970 135.239 29.418 1.00 60.54 C
ATOM 16 O2 C B 329 8.404 135.784 28.457 1.00 63.78 O
ATOM 17 N3 C B 329 8.292 134.472 30.301 1.00 59.85 N
ATOM 18 C4 C B 329 8.932 133.921 31.327 1.00 58.50 C
ATOM 19 N4 C B 329 8.233 133.153 32.154 1.00 59.52 N
ATOM 20 C5 C B 329 10.322 134.127 31.547 1.00 59.13 C
ATOM 21 C6 C B 329 10.983 134.883 30.663 1.00 58.49 C
ATOM 22 P C B 330 11.610 140.642 29.433 1.00 52.00 P
ATOM 23 OP1 C B 330 10.746 140.379 30.605 1.00 51.41 O
ATOM 24 OP2 C B 330 10.992 140.896 28.124 1.00 54.71 O
ATOM 25 O5' C B 330 12.562 141.872 29.743 1.00 51.41 O
TER
ATOM 2 P C A 331 15.772 143.856 28.132 1.00 54.34 P
ATOM 3 OP1 C A 331 15.720 144.653 26.880 1.00 53.92 O
ATOM 4 OP2 C A 331 15.408 142.414 28.100 1.00 55.10 O
ATOM 5 O5' C A 331 17.232 144.015 28.747 1.00 54.05 O
ATOM 6 C5' C A 331 17.820 145.327 28.909 1.00 52.41 C
ATOM 7 C4' C A 331 19.173 145.229 29.574 1.00 50.10 C
ATOM 8 O4' C A 331 19.031 144.896 30.983 1.00 50.37 O
ATOM 9 C3' C A 331 20.082 144.147 29.030 1.00 47.96 C
ATOM 10 O3' C A 331 20.722 144.534 27.836 1.00 45.35 O
ATOM 11 C2' C A 331 21.053 143.936 30.180 1.00 49.97 C
ATOM 12 O2' C A 331 22.068 144.919 30.249 1.00 50.09 O
ATOM 13 C1' C A 331 20.114 144.062 31.384 1.00 51.91 C
ATOM 14 N1 C A 331 19.579 142.747 31.812 1.00 53.94 N
ATOM 15 C2 C A 331 20.450 141.825 32.417 1.00 54.41 C
ATOM 16 O2 C A 331 21.636 142.142 32.599 1.00 54.68 O
ATOM 17 N3 C A 331 19.976 140.615 32.787 1.00 54.32 N
ATOM 18 C4 C A 331 18.694 140.312 32.590 1.00 54.40 C
ATOM 19 N4 C A 331 18.271 139.112 32.985 1.00 54.36 N
ATOM 20 C5 C A 331 17.787 141.226 31.985 1.00 54.59 C
ATOM 21 C6 C A 331 18.265 142.420 31.616 1.00 54.71 C
ATOM 22 P C A 332 21.300 143.407 26.855 1.00 46.24 P
ATOM 23 OP1 C A 332 21.775 144.085 25.630 1.00 47.82 O
ATOM 24 OP2 C A 332 20.309 142.317 26.746 1.00 46.73 O
ATOM 25 O5' C A 332 22.570 142.836 27.621 1.00 48.01 O
TER
ATOM 1 O3' A B 328 15.745 134.722 31.516 1.00 53.94 O
ATOM 2 P C B 329 15.159 136.085 32.127 1.00 54.55 P
ATOM 3 OP1 C B 329 16.247 137.092 32.142 1.00 53.20 O
ATOM 4 OP2 C B 329 14.451 135.754 33.382 1.00 54.82 O
ATOM 5 O5' C B 329 14.068 136.532 31.059 1.00 56.95 O
ATOM 6 C5' C B 329 14.444 136.816 29.696 1.00 57.80 C
ATOM 7 C4' C B 329 13.218 137.108 28.861 1.00 57.43 C
ATOM 8 O4' C B 329 12.454 135.894 28.652 1.00 57.60 O
ATOM 9 C3' C B 329 12.220 138.089 29.455 1.00 56.55 C
ATOM 10 O3' C B 329 12.640 139.430 29.222 1.00 53.70 O
ATOM 11 C2' C B 329 10.935 137.732 28.720 1.00 57.57 C
ATOM 12 O2' C B 329 10.885 138.293 27.426 1.00 58.33 O
ATOM 13 C1' C B 329 11.075 136.215 28.580 1.00 58.24 C
ATOM 14 N1 C B 329 10.343 135.432 29.590 1.00 58.64 N
ATOM 15 C2 C B 329 8.970 135.239 29.418 1.00 60.54 C
ATOM 16 O2 C B 329 8.404 135.784 28.457 1.00 63.78 O
ATOM 17 N3 C B 329 8.292 134.472 30.301 1.00 59.85 N
ATOM 18 C4 C B 329 8.932 133.921 31.327 1.00 58.50 C
ATOM 19 N4 C B 329 8.233 133.153 32.154 1.00 59.52 N
ATOM 20 C5 C B 329 10.322 134.127 31.547 1.00 59.13 C
ATOM 21 C6 C B 329 10.983 134.883 30.663 1.00 58.49 C
ATOM 22 P C B 330 11.610 140.642 29.433 1.00 52.00 P
ATOM 23 OP1 C B 330 10.746 140.379 30.605 1.00 51.41 O
ATOM 24 OP2 C B 330 10.992 140.896 28.124 1.00 54.71 O
ATOM 25 O5' C B 330 12.562 141.872 29.743 1.00 51.41 O
TER
Atoms:
C2: (20.450,141.825,32.417)
OP1: (15.720,144.653,26.880)
OP2: (15.408,142.414,28.100)
C4: (18.694,140.312,32.590)
O5': (17.232,144.015,28.747)
C3': (20.082,144.147,29.030)
C1': (20.114,144.062,31.384)
O4': (19.031,144.896,30.983)
C5': (17.820,145.327,28.909)
P: (15.772,143.856,28.132)
O2: (21.636,142.142,32.599)
C4': (19.173,145.229,29.574)
C2': (21.053,143.936,30.180)
O2': (22.068,144.919,30.249)
N1: (19.579,142.747,31.812)
N3: (19.976,140.615,32.787)
N4: (18.271,139.112,32.985)
C6: (18.265,142.420,31.616)
C5: (17.787,141.226,31.985)
O3': (20.722,144.534,27.836)
OP1: (15.720,144.653,26.880)
OP2: (15.408,142.414,28.100)
C4: (18.694,140.312,32.590)
O5': (17.232,144.015,28.747)
C3': (20.082,144.147,29.030)
C1': (20.114,144.062,31.384)
O4': (19.031,144.896,30.983)
C5': (17.820,145.327,28.909)
P: (15.772,143.856,28.132)
O2: (21.636,142.142,32.599)
C4': (19.173,145.229,29.574)
C2': (21.053,143.936,30.180)
O2': (22.068,144.919,30.249)
N1: (19.579,142.747,31.812)
N3: (19.976,140.615,32.787)
N4: (18.271,139.112,32.985)
C6: (18.265,142.420,31.616)
C5: (17.787,141.226,31.985)
O3': (20.722,144.534,27.836)
C2: (8.970,135.239,29.418)
OP1: (16.247,137.092,32.142)
OP2: (14.451,135.754,33.382)
C4: (8.932,133.921,31.327)
O5': (14.068,136.532,31.059)
C3': (12.220,138.089,29.455)
C1': (11.075,136.215,28.580)
O4': (12.454,135.894,28.652)
C5': (14.444,136.816,29.696)
P: (15.159,136.085,32.127)
O2: (8.404,135.784,28.457)
C4': (13.218,137.108,28.861)
C2': (10.935,137.732,28.720)
O2': (10.885,138.293,27.426)
N1: (10.343,135.432,29.590)
N3: (8.292,134.472,30.301)
N4: (8.233,133.153,32.154)
C6: (10.983,134.883,30.663)
C5: (10.322,134.127,31.547)
O3': (12.640,139.430,29.222)
OP1: (16.247,137.092,32.142)
OP2: (14.451,135.754,33.382)
C4: (8.932,133.921,31.327)
O5': (14.068,136.532,31.059)
C3': (12.220,138.089,29.455)
C1': (11.075,136.215,28.580)
O4': (12.454,135.894,28.652)
C5': (14.444,136.816,29.696)
P: (15.159,136.085,32.127)
O2: (8.404,135.784,28.457)
C4': (13.218,137.108,28.861)
C2': (10.935,137.732,28.720)
O2': (10.885,138.293,27.426)
N1: (10.343,135.432,29.590)
N3: (8.292,134.472,30.301)
N4: (8.233,133.153,32.154)
C6: (10.983,134.883,30.663)
C5: (10.322,134.127,31.547)
O3': (12.640,139.430,29.222)
Image (generated by PyMOL):