Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B60:B59
Extra
PDB:
ATOM 1 O3' G A 59 -2.044 -38.435 3.363 1.00 80.73 O
ATOM 2 P C A 60 -2.894 -37.840 2.152 1.00 42.47 P
ATOM 3 OP1 C A 60 -2.734 -36.410 2.260 1.00 50.50 O
ATOM 4 OP2 C A 60 -4.239 -38.438 2.082 1.00 47.15 O
ATOM 5 O5' C A 60 -2.069 -38.220 0.834 1.00 53.35 O
ATOM 6 C5' C A 60 -2.682 -38.704 -0.396 1.00 45.63 C
ATOM 7 C4' C A 60 -1.538 -39.237 -1.228 1.00 47.11 C
ATOM 8 O4' C A 60 -0.466 -38.251 -1.313 1.00 44.33 O
ATOM 9 C3' C A 60 -0.906 -40.423 -0.496 1.00 42.70 C
ATOM 10 O3' C A 60 -1.589 -41.671 -0.738 1.00 47.57 O
ATOM 11 C2' C A 60 0.511 -40.427 -1.043 1.00 44.97 C
ATOM 12 O2' C A 60 0.660 -41.108 -2.270 1.00 54.65 O
ATOM 13 C1' C A 60 0.779 -38.954 -1.233 1.00 47.48 C
ATOM 14 N1 C A 60 1.679 -38.497 -0.130 1.00 48.27 N
ATOM 15 C2 C A 60 2.931 -39.143 0.002 1.00 47.04 C
ATOM 16 O2 C A 60 3.176 -40.041 -0.817 1.00 44.82 O
ATOM 17 N3 C A 60 3.801 -38.760 0.987 1.00 48.27 N
ATOM 18 C4 C A 60 3.405 -37.768 1.835 1.00 38.12 C
ATOM 19 N4 C A 60 4.201 -37.357 2.826 1.00 41.94 N
ATOM 20 C5 C A 60 2.139 -37.178 1.727 1.00 38.07 C
ATOM 21 C6 C A 60 1.310 -37.530 0.738 1.00 42.10 C
ATOM 22 P C A 61 -1.600 -42.759 0.440 1.00 51.47 P
ATOM 23 OP1 C A 61 -2.675 -43.743 0.211 1.00 53.23 O
ATOM 24 OP2 C A 61 -1.496 -42.093 1.763 1.00 50.62 O
ATOM 25 O5' C A 61 -0.152 -43.395 0.222 1.00 55.07 O
TER
ATOM 1 O3' U B 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 2 P G B 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 3 OP1 G B 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 4 OP2 G B 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 5 O5' G B 59 0.970 -35.935 4.596 1.00 64.46 O
ATOM 6 C5' G B 59 -0.411 -35.984 4.773 1.00 74.29 C
ATOM 7 C4' G B 59 -0.819 -37.393 5.143 1.00 82.39 C
ATOM 8 O4' G B 59 -0.998 -37.387 6.576 1.00 89.68 O
ATOM 9 C3' G B 59 -2.178 -37.775 4.589 1.00 84.39 C
ATOM 10 O3' G B 59 -2.044 -38.435 3.363 1.00 80.73 O
ATOM 11 C2' G B 59 -2.732 -38.683 5.671 1.00 90.96 C
ATOM 12 O2' G B 59 -2.152 -39.980 5.641 1.00 89.23 O
ATOM 13 C1' G B 59 -2.260 -37.939 6.918 1.00 94.75 C
ATOM 14 N9 G B 59 -3.193 -36.949 7.488 1.00101.39 N
ATOM 15 C8 G B 59 -4.127 -37.248 8.446 1.00104.75 C
ATOM 16 N7 G B 59 -4.848 -36.230 8.817 1.00106.86 N
ATOM 17 C5 G B 59 -4.371 -35.163 8.070 1.00106.84 C
ATOM 18 C6 G B 59 -4.779 -33.791 8.064 1.00108.86 C
ATOM 19 O6 G B 59 -5.672 -33.231 8.720 1.00107.64 O
ATOM 20 N1 G B 59 -4.033 -33.026 7.167 1.00109.39 N
ATOM 21 C2 G B 59 -3.019 -33.529 6.378 1.00106.94 C
ATOM 22 N2 G B 59 -2.418 -32.630 5.577 1.00106.23 N
ATOM 23 N3 G B 59 -2.630 -34.812 6.376 1.00103.50 N
ATOM 24 C4 G B 59 -3.343 -35.585 7.245 1.00103.90 C
ATOM 25 P C B 60 -2.894 -37.840 2.152 1.00 42.47 P
ATOM 26 OP1 C B 60 -2.734 -36.410 2.260 1.00 50.50 O
ATOM 27 OP2 C B 60 -4.239 -38.438 2.082 1.00 47.15 O
ATOM 28 O5' C B 60 -2.069 -38.220 0.834 1.00 53.35 O
TER
ATOM 2 P C A 60 -2.894 -37.840 2.152 1.00 42.47 P
ATOM 3 OP1 C A 60 -2.734 -36.410 2.260 1.00 50.50 O
ATOM 4 OP2 C A 60 -4.239 -38.438 2.082 1.00 47.15 O
ATOM 5 O5' C A 60 -2.069 -38.220 0.834 1.00 53.35 O
ATOM 6 C5' C A 60 -2.682 -38.704 -0.396 1.00 45.63 C
ATOM 7 C4' C A 60 -1.538 -39.237 -1.228 1.00 47.11 C
ATOM 8 O4' C A 60 -0.466 -38.251 -1.313 1.00 44.33 O
ATOM 9 C3' C A 60 -0.906 -40.423 -0.496 1.00 42.70 C
ATOM 10 O3' C A 60 -1.589 -41.671 -0.738 1.00 47.57 O
ATOM 11 C2' C A 60 0.511 -40.427 -1.043 1.00 44.97 C
ATOM 12 O2' C A 60 0.660 -41.108 -2.270 1.00 54.65 O
ATOM 13 C1' C A 60 0.779 -38.954 -1.233 1.00 47.48 C
ATOM 14 N1 C A 60 1.679 -38.497 -0.130 1.00 48.27 N
ATOM 15 C2 C A 60 2.931 -39.143 0.002 1.00 47.04 C
ATOM 16 O2 C A 60 3.176 -40.041 -0.817 1.00 44.82 O
ATOM 17 N3 C A 60 3.801 -38.760 0.987 1.00 48.27 N
ATOM 18 C4 C A 60 3.405 -37.768 1.835 1.00 38.12 C
ATOM 19 N4 C A 60 4.201 -37.357 2.826 1.00 41.94 N
ATOM 20 C5 C A 60 2.139 -37.178 1.727 1.00 38.07 C
ATOM 21 C6 C A 60 1.310 -37.530 0.738 1.00 42.10 C
ATOM 22 P C A 61 -1.600 -42.759 0.440 1.00 51.47 P
ATOM 23 OP1 C A 61 -2.675 -43.743 0.211 1.00 53.23 O
ATOM 24 OP2 C A 61 -1.496 -42.093 1.763 1.00 50.62 O
ATOM 25 O5' C A 61 -0.152 -43.395 0.222 1.00 55.07 O
TER
ATOM 1 O3' U B 58 0.999 -33.446 4.405 1.00 42.97 O
ATOM 2 P G B 59 1.804 -34.705 5.097 1.00 60.70 P
ATOM 3 OP1 G B 59 1.632 -34.654 6.540 1.00 57.22 O
ATOM 4 OP2 G B 59 3.170 -34.828 4.588 1.00 60.77 O
ATOM 5 O5' G B 59 0.970 -35.935 4.596 1.00 64.46 O
ATOM 6 C5' G B 59 -0.411 -35.984 4.773 1.00 74.29 C
ATOM 7 C4' G B 59 -0.819 -37.393 5.143 1.00 82.39 C
ATOM 8 O4' G B 59 -0.998 -37.387 6.576 1.00 89.68 O
ATOM 9 C3' G B 59 -2.178 -37.775 4.589 1.00 84.39 C
ATOM 10 O3' G B 59 -2.044 -38.435 3.363 1.00 80.73 O
ATOM 11 C2' G B 59 -2.732 -38.683 5.671 1.00 90.96 C
ATOM 12 O2' G B 59 -2.152 -39.980 5.641 1.00 89.23 O
ATOM 13 C1' G B 59 -2.260 -37.939 6.918 1.00 94.75 C
ATOM 14 N9 G B 59 -3.193 -36.949 7.488 1.00101.39 N
ATOM 15 C8 G B 59 -4.127 -37.248 8.446 1.00104.75 C
ATOM 16 N7 G B 59 -4.848 -36.230 8.817 1.00106.86 N
ATOM 17 C5 G B 59 -4.371 -35.163 8.070 1.00106.84 C
ATOM 18 C6 G B 59 -4.779 -33.791 8.064 1.00108.86 C
ATOM 19 O6 G B 59 -5.672 -33.231 8.720 1.00107.64 O
ATOM 20 N1 G B 59 -4.033 -33.026 7.167 1.00109.39 N
ATOM 21 C2 G B 59 -3.019 -33.529 6.378 1.00106.94 C
ATOM 22 N2 G B 59 -2.418 -32.630 5.577 1.00106.23 N
ATOM 23 N3 G B 59 -2.630 -34.812 6.376 1.00103.50 N
ATOM 24 C4 G B 59 -3.343 -35.585 7.245 1.00103.90 C
ATOM 25 P C B 60 -2.894 -37.840 2.152 1.00 42.47 P
ATOM 26 OP1 C B 60 -2.734 -36.410 2.260 1.00 50.50 O
ATOM 27 OP2 C B 60 -4.239 -38.438 2.082 1.00 47.15 O
ATOM 28 O5' C B 60 -2.069 -38.220 0.834 1.00 53.35 O
TER
Atoms:
C2: (2.931,-39.143,0.002)
OP1: (-2.734,-36.410,2.260)
OP2: (-4.239,-38.438,2.082)
C4: (3.405,-37.768,1.835)
O5': (-2.069,-38.220,0.834)
C3': (-0.906,-40.423,-0.496)
C1': (0.779,-38.954,-1.233)
O4': (-0.466,-38.251,-1.313)
C5': (-2.682,-38.704,-0.396)
P: (-2.894,-37.840,2.152)
O2: (3.176,-40.041,-0.817)
C4': (-1.538,-39.237,-1.228)
C2': (0.511,-40.427,-1.043)
O2': (0.660,-41.108,-2.270)
N1: (1.679,-38.497,-0.130)
N3: (3.801,-38.760,0.987)
N4: (4.201,-37.357,2.826)
C6: (1.310,-37.530,0.738)
C5: (2.139,-37.178,1.727)
O3': (-1.589,-41.671,-0.738)
OP1: (-2.734,-36.410,2.260)
OP2: (-4.239,-38.438,2.082)
C4: (3.405,-37.768,1.835)
O5': (-2.069,-38.220,0.834)
C3': (-0.906,-40.423,-0.496)
C1': (0.779,-38.954,-1.233)
O4': (-0.466,-38.251,-1.313)
C5': (-2.682,-38.704,-0.396)
P: (-2.894,-37.840,2.152)
O2: (3.176,-40.041,-0.817)
C4': (-1.538,-39.237,-1.228)
C2': (0.511,-40.427,-1.043)
O2': (0.660,-41.108,-2.270)
N1: (1.679,-38.497,-0.130)
N3: (3.801,-38.760,0.987)
N4: (4.201,-37.357,2.826)
C6: (1.310,-37.530,0.738)
C5: (2.139,-37.178,1.727)
O3': (-1.589,-41.671,-0.738)
OP1: (1.632,-34.654,6.540)
OP2: (3.170,-34.828,4.588)
C3': (-2.178,-37.775,4.589)
C1': (-2.260,-37.939,6.918)
C5': (-0.411,-35.984,4.773)
O6: (-5.672,-33.231,8.720)
O4': (-0.998,-37.387,6.576)
C8: (-4.127,-37.248,8.446)
C2: (-3.019,-33.529,6.378)
C6: (-4.779,-33.791,8.064)
C5: (-4.371,-35.163,8.070)
C4: (-3.343,-35.585,7.245)
P: (1.804,-34.705,5.097)
C4': (-0.819,-37.393,5.143)
C2': (-2.732,-38.683,5.671)
O2': (-2.152,-39.980,5.641)
N1: (-4.033,-33.026,7.167)
N2: (-2.418,-32.630,5.577)
N3: (-2.630,-34.812,6.376)
N7: (-4.848,-36.230,8.817)
N9: (-3.193,-36.949,7.488)
O5': (0.970,-35.935,4.596)
O3': (-2.044,-38.435,3.363)
OP2: (3.170,-34.828,4.588)
C3': (-2.178,-37.775,4.589)
C1': (-2.260,-37.939,6.918)
C5': (-0.411,-35.984,4.773)
O6: (-5.672,-33.231,8.720)
O4': (-0.998,-37.387,6.576)
C8: (-4.127,-37.248,8.446)
C2: (-3.019,-33.529,6.378)
C6: (-4.779,-33.791,8.064)
C5: (-4.371,-35.163,8.070)
C4: (-3.343,-35.585,7.245)
P: (1.804,-34.705,5.097)
C4': (-0.819,-37.393,5.143)
C2': (-2.732,-38.683,5.671)
O2': (-2.152,-39.980,5.641)
N1: (-4.033,-33.026,7.167)
N2: (-2.418,-32.630,5.577)
N3: (-2.630,-34.812,6.376)
N7: (-4.848,-36.230,8.817)
N9: (-3.193,-36.949,7.488)
O5': (0.970,-35.935,4.596)
O3': (-2.044,-38.435,3.363)
Image (generated by PyMOL):