Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:A60:A59
Extra
PDB:
ATOM 1 O3' G A 59 0.537 17.368 -21.641 1.00 30.26 O
ATOM 2 P C A 60 -0.123 18.357 -22.709 1.00 30.69 P
ATOM 3 OP1 C A 60 -0.125 19.730 -22.158 1.00 33.13 O
ATOM 4 OP2 C A 60 -1.386 17.742 -23.168 1.00 30.36 O
ATOM 5 O5' C A 60 0.942 18.305 -23.904 1.00 30.17 O
ATOM 6 C5' C A 60 0.619 17.627 -25.113 1.00 29.21 C
ATOM 7 C4' C A 60 1.848 16.963 -25.705 1.00 29.23 C
ATOM 8 O4' C A 60 2.935 17.913 -25.829 1.00 31.94 O
ATOM 9 C3' C A 60 2.422 15.853 -24.842 1.00 31.17 C
ATOM 10 O3' C A 60 1.718 14.664 -25.105 1.00 30.33 O
ATOM 11 C2' C A 60 3.856 15.799 -25.354 1.00 33.92 C
ATOM 12 O2' C A 60 3.959 15.168 -26.614 1.00 33.96 O
ATOM 13 C1' C A 60 4.156 17.288 -25.485 1.00 29.69 C
ATOM 14 N1 C A 60 4.664 17.892 -24.222 1.00 31.37 N
ATOM 15 C2 C A 60 5.931 17.529 -23.756 1.00 32.03 C
ATOM 16 O2 C A 60 6.598 16.717 -24.410 1.00 33.27 O
ATOM 17 N3 C A 60 6.391 18.078 -22.604 1.00 29.52 N
ATOM 18 C4 C A 60 5.638 18.952 -21.933 1.00 31.10 C
ATOM 19 N4 C A 60 6.136 19.468 -20.802 1.00 26.14 N
ATOM 20 C5 C A 60 4.343 19.334 -22.394 1.00 27.78 C
ATOM 21 C6 C A 60 3.900 18.785 -23.531 1.00 30.35 C
ATOM 22 P C A 61 1.630 13.522 -23.990 1.00 30.44 P
ATOM 23 OP1 C A 61 0.738 12.484 -24.540 1.00 27.90 O
ATOM 24 OP2 C A 61 1.333 14.136 -22.677 1.00 28.93 O
ATOM 25 O5' C A 61 3.127 12.965 -23.937 1.00 30.88 O
TER
ATOM 1 O3' U B 58 2.712 22.801 -19.910 1.00 29.33 O
ATOM 2 P G B 59 3.629 21.737 -19.141 1.00 30.04 P
ATOM 3 OP1 G B 59 3.337 21.890 -17.700 1.00 27.90 O
ATOM 4 OP2 G B 59 5.018 21.905 -19.619 1.00 29.39 O
ATOM 5 O5' G B 59 3.153 20.301 -19.663 1.00 27.47 O
ATOM 6 C5' G B 59 1.801 19.881 -19.817 1.00 31.21 C
ATOM 7 C4' G B 59 1.816 18.358 -19.852 1.00 27.95 C
ATOM 8 O4' G B 59 2.123 17.889 -18.517 1.00 31.37 O
ATOM 9 C3' G B 59 0.538 17.629 -20.245 1.00 28.61 C
ATOM 10 O3' G B 59 0.537 17.368 -21.641 1.00 30.26 O
ATOM 11 C2' G B 59 0.678 16.294 -19.518 1.00 29.28 C
ATOM 12 O2' G B 59 1.383 15.349 -20.301 1.00 27.21 O
ATOM 13 C1' G B 59 1.528 16.625 -18.298 1.00 28.34 C
ATOM 14 N9 G B 59 0.802 16.696 -17.037 1.00 31.37 N
ATOM 15 C8 G B 59 0.985 15.882 -15.945 1.00 30.36 C
ATOM 16 N7 G B 59 0.208 16.181 -14.943 1.00 28.91 N
ATOM 17 C5 G B 59 -0.534 17.262 -15.399 1.00 28.84 C
ATOM 18 C6 G B 59 -1.539 18.009 -14.748 1.00 32.03 C
ATOM 19 O6 G B 59 -1.976 17.851 -13.604 1.00 31.53 O
ATOM 20 N1 G B 59 -2.043 19.026 -15.556 1.00 30.03 N
ATOM 21 C2 G B 59 -1.623 19.284 -16.839 1.00 36.72 C
ATOM 22 N2 G B 59 -2.227 20.308 -17.462 1.00 34.23 N
ATOM 23 N3 G B 59 -0.680 18.588 -17.467 1.00 32.11 N
ATOM 24 C4 G B 59 -0.181 17.596 -16.688 1.00 28.27 C
ATOM 25 P C B 60 -0.123 18.357 -22.709 1.00 30.69 P
ATOM 26 OP1 C B 60 -0.125 19.730 -22.158 1.00 33.13 O
ATOM 27 OP2 C B 60 -1.386 17.742 -23.168 1.00 30.36 O
ATOM 28 O5' C B 60 0.942 18.305 -23.904 1.00 30.17 O
TER
ATOM 2 P C A 60 -0.123 18.357 -22.709 1.00 30.69 P
ATOM 3 OP1 C A 60 -0.125 19.730 -22.158 1.00 33.13 O
ATOM 4 OP2 C A 60 -1.386 17.742 -23.168 1.00 30.36 O
ATOM 5 O5' C A 60 0.942 18.305 -23.904 1.00 30.17 O
ATOM 6 C5' C A 60 0.619 17.627 -25.113 1.00 29.21 C
ATOM 7 C4' C A 60 1.848 16.963 -25.705 1.00 29.23 C
ATOM 8 O4' C A 60 2.935 17.913 -25.829 1.00 31.94 O
ATOM 9 C3' C A 60 2.422 15.853 -24.842 1.00 31.17 C
ATOM 10 O3' C A 60 1.718 14.664 -25.105 1.00 30.33 O
ATOM 11 C2' C A 60 3.856 15.799 -25.354 1.00 33.92 C
ATOM 12 O2' C A 60 3.959 15.168 -26.614 1.00 33.96 O
ATOM 13 C1' C A 60 4.156 17.288 -25.485 1.00 29.69 C
ATOM 14 N1 C A 60 4.664 17.892 -24.222 1.00 31.37 N
ATOM 15 C2 C A 60 5.931 17.529 -23.756 1.00 32.03 C
ATOM 16 O2 C A 60 6.598 16.717 -24.410 1.00 33.27 O
ATOM 17 N3 C A 60 6.391 18.078 -22.604 1.00 29.52 N
ATOM 18 C4 C A 60 5.638 18.952 -21.933 1.00 31.10 C
ATOM 19 N4 C A 60 6.136 19.468 -20.802 1.00 26.14 N
ATOM 20 C5 C A 60 4.343 19.334 -22.394 1.00 27.78 C
ATOM 21 C6 C A 60 3.900 18.785 -23.531 1.00 30.35 C
ATOM 22 P C A 61 1.630 13.522 -23.990 1.00 30.44 P
ATOM 23 OP1 C A 61 0.738 12.484 -24.540 1.00 27.90 O
ATOM 24 OP2 C A 61 1.333 14.136 -22.677 1.00 28.93 O
ATOM 25 O5' C A 61 3.127 12.965 -23.937 1.00 30.88 O
TER
ATOM 1 O3' U B 58 2.712 22.801 -19.910 1.00 29.33 O
ATOM 2 P G B 59 3.629 21.737 -19.141 1.00 30.04 P
ATOM 3 OP1 G B 59 3.337 21.890 -17.700 1.00 27.90 O
ATOM 4 OP2 G B 59 5.018 21.905 -19.619 1.00 29.39 O
ATOM 5 O5' G B 59 3.153 20.301 -19.663 1.00 27.47 O
ATOM 6 C5' G B 59 1.801 19.881 -19.817 1.00 31.21 C
ATOM 7 C4' G B 59 1.816 18.358 -19.852 1.00 27.95 C
ATOM 8 O4' G B 59 2.123 17.889 -18.517 1.00 31.37 O
ATOM 9 C3' G B 59 0.538 17.629 -20.245 1.00 28.61 C
ATOM 10 O3' G B 59 0.537 17.368 -21.641 1.00 30.26 O
ATOM 11 C2' G B 59 0.678 16.294 -19.518 1.00 29.28 C
ATOM 12 O2' G B 59 1.383 15.349 -20.301 1.00 27.21 O
ATOM 13 C1' G B 59 1.528 16.625 -18.298 1.00 28.34 C
ATOM 14 N9 G B 59 0.802 16.696 -17.037 1.00 31.37 N
ATOM 15 C8 G B 59 0.985 15.882 -15.945 1.00 30.36 C
ATOM 16 N7 G B 59 0.208 16.181 -14.943 1.00 28.91 N
ATOM 17 C5 G B 59 -0.534 17.262 -15.399 1.00 28.84 C
ATOM 18 C6 G B 59 -1.539 18.009 -14.748 1.00 32.03 C
ATOM 19 O6 G B 59 -1.976 17.851 -13.604 1.00 31.53 O
ATOM 20 N1 G B 59 -2.043 19.026 -15.556 1.00 30.03 N
ATOM 21 C2 G B 59 -1.623 19.284 -16.839 1.00 36.72 C
ATOM 22 N2 G B 59 -2.227 20.308 -17.462 1.00 34.23 N
ATOM 23 N3 G B 59 -0.680 18.588 -17.467 1.00 32.11 N
ATOM 24 C4 G B 59 -0.181 17.596 -16.688 1.00 28.27 C
ATOM 25 P C B 60 -0.123 18.357 -22.709 1.00 30.69 P
ATOM 26 OP1 C B 60 -0.125 19.730 -22.158 1.00 33.13 O
ATOM 27 OP2 C B 60 -1.386 17.742 -23.168 1.00 30.36 O
ATOM 28 O5' C B 60 0.942 18.305 -23.904 1.00 30.17 O
TER
Atoms:
C2: (5.931,17.529,-23.756)
OP1: (-0.125,19.730,-22.158)
OP2: (-1.386,17.742,-23.168)
C4: (5.638,18.952,-21.933)
O5': (0.942,18.305,-23.904)
C3': (2.422,15.853,-24.842)
C1': (4.156,17.288,-25.485)
O4': (2.935,17.913,-25.829)
C5': (0.619,17.627,-25.113)
P: (-0.123,18.357,-22.709)
O2: (6.598,16.717,-24.410)
C4': (1.848,16.963,-25.705)
C2': (3.856,15.799,-25.354)
O2': (3.959,15.168,-26.614)
N1: (4.664,17.892,-24.222)
N3: (6.391,18.078,-22.604)
N4: (6.136,19.468,-20.802)
C6: (3.900,18.785,-23.531)
C5: (4.343,19.334,-22.394)
O3': (1.718,14.664,-25.105)
OP1: (-0.125,19.730,-22.158)
OP2: (-1.386,17.742,-23.168)
C4: (5.638,18.952,-21.933)
O5': (0.942,18.305,-23.904)
C3': (2.422,15.853,-24.842)
C1': (4.156,17.288,-25.485)
O4': (2.935,17.913,-25.829)
C5': (0.619,17.627,-25.113)
P: (-0.123,18.357,-22.709)
O2: (6.598,16.717,-24.410)
C4': (1.848,16.963,-25.705)
C2': (3.856,15.799,-25.354)
O2': (3.959,15.168,-26.614)
N1: (4.664,17.892,-24.222)
N3: (6.391,18.078,-22.604)
N4: (6.136,19.468,-20.802)
C6: (3.900,18.785,-23.531)
C5: (4.343,19.334,-22.394)
O3': (1.718,14.664,-25.105)
OP1: (3.337,21.890,-17.700)
OP2: (5.018,21.905,-19.619)
C3': (0.538,17.629,-20.245)
C1': (1.528,16.625,-18.298)
C5': (1.801,19.881,-19.817)
O6: (-1.976,17.851,-13.604)
O4': (2.123,17.889,-18.517)
C8: (0.985,15.882,-15.945)
C2: (-1.623,19.284,-16.839)
C6: (-1.539,18.009,-14.748)
C5: (-0.534,17.262,-15.399)
C4: (-0.181,17.596,-16.688)
P: (3.629,21.737,-19.141)
C4': (1.816,18.358,-19.852)
C2': (0.678,16.294,-19.518)
O2': (1.383,15.349,-20.301)
N1: (-2.043,19.026,-15.556)
N2: (-2.227,20.308,-17.462)
N3: (-0.680,18.588,-17.467)
N7: (0.208,16.181,-14.943)
N9: (0.802,16.696,-17.037)
O5': (3.153,20.301,-19.663)
O3': (0.537,17.368,-21.641)
OP2: (5.018,21.905,-19.619)
C3': (0.538,17.629,-20.245)
C1': (1.528,16.625,-18.298)
C5': (1.801,19.881,-19.817)
O6: (-1.976,17.851,-13.604)
O4': (2.123,17.889,-18.517)
C8: (0.985,15.882,-15.945)
C2: (-1.623,19.284,-16.839)
C6: (-1.539,18.009,-14.748)
C5: (-0.534,17.262,-15.399)
C4: (-0.181,17.596,-16.688)
P: (3.629,21.737,-19.141)
C4': (1.816,18.358,-19.852)
C2': (0.678,16.294,-19.518)
O2': (1.383,15.349,-20.301)
N1: (-2.043,19.026,-15.556)
N2: (-2.227,20.308,-17.462)
N3: (-0.680,18.588,-17.467)
N7: (0.208,16.181,-14.943)
N9: (0.802,16.696,-17.037)
O5': (3.153,20.301,-19.663)
O3': (0.537,17.368,-21.641)
Image (generated by PyMOL):