Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B60:B59
Extra
PDB:
ATOM 1 O3' G A 59 -1.738 38.632 -3.143 1.00 30.34 O
ATOM 2 P C A 60 -2.508 37.597 -2.204 1.00 31.51 P
ATOM 3 OP1 C A 60 -2.320 36.244 -2.773 1.00 35.57 O
ATOM 4 OP2 C A 60 -3.871 38.131 -1.995 1.00 28.46 O
ATOM 5 O5' C A 60 -1.684 37.664 -0.832 1.00 32.43 O
ATOM 6 C5' C A 60 -2.253 38.260 0.330 1.00 32.57 C
ATOM 7 C4' C A 60 -1.212 39.056 1.097 1.00 32.40 C
ATOM 8 O4' C A 60 -0.038 38.242 1.341 1.00 32.16 O
ATOM 9 C3' C A 60 -0.684 40.267 0.345 1.00 30.27 C
ATOM 10 O3' C A 60 -1.544 41.374 0.550 1.00 31.35 O
ATOM 11 C2' C A 60 0.674 40.475 1.003 1.00 34.03 C
ATOM 12 O2' C A 60 0.583 41.149 2.244 1.00 37.00 O
ATOM 13 C1' C A 60 1.130 39.034 1.208 1.00 34.15 C
ATOM 14 N1 C A 60 1.937 38.525 0.067 1.00 33.64 N
ATOM 15 C2 C A 60 3.228 39.027 -0.127 1.00 36.22 C
ATOM 16 O2 C A 60 3.667 39.878 0.657 1.00 36.20 O
ATOM 17 N3 C A 60 3.962 38.564 -1.167 1.00 31.60 N
ATOM 18 C4 C A 60 3.451 37.646 -1.990 1.00 32.33 C
ATOM 19 N4 C A 60 4.217 37.225 -3.001 1.00 29.84 N
ATOM 20 C5 C A 60 2.136 37.124 -1.811 1.00 28.51 C
ATOM 21 C6 C A 60 1.420 37.588 -0.780 1.00 32.93 C
ATOM 22 P C A 61 -1.642 42.523 -0.561 1.00 31.40 P
ATOM 23 OP1 C A 61 -2.712 43.446 -0.134 1.00 29.04 O
ATOM 24 OP2 C A 61 -1.702 41.894 -1.898 1.00 32.27 O
ATOM 25 O5' C A 61 -0.241 43.277 -0.431 1.00 35.04 O
TER
ATOM 1 O3' U B 58 1.126 33.504 -4.570 1.00 30.02 O
ATOM 2 P G B 59 2.050 34.687 -5.129 1.00 32.22 P
ATOM 3 OP1 G B 59 1.973 34.650 -6.604 1.00 35.10 O
ATOM 4 OP2 G B 59 3.371 34.612 -4.463 1.00 29.02 O
ATOM 5 O5' G B 59 1.337 36.011 -4.596 1.00 27.21 O
ATOM 6 C5' G B 59 -0.026 36.319 -4.835 1.00 30.08 C
ATOM 7 C4' G B 59 -0.160 37.829 -4.745 1.00 29.05 C
ATOM 8 O4' G B 59 0.300 38.390 -5.995 1.00 29.91 O
ATOM 9 C3' G B 59 -1.558 38.386 -4.526 1.00 29.32 C
ATOM 10 O3' G B 59 -1.738 38.632 -3.143 1.00 30.34 O
ATOM 11 C2' G B 59 -1.529 39.724 -5.261 1.00 32.19 C
ATOM 12 O2' G B 59 -1.157 40.772 -4.388 1.00 32.29 O
ATOM 13 C1' G B 59 -0.447 39.546 -6.320 1.00 29.37 C
ATOM 14 N9 G B 59 -0.949 39.373 -7.678 1.00 33.67 N
ATOM 15 C8 G B 59 -0.689 40.190 -8.751 1.00 29.77 C
ATOM 16 N7 G B 59 -1.260 39.787 -9.850 1.00 31.21 N
ATOM 17 C5 G B 59 -1.941 38.632 -9.484 1.00 32.78 C
ATOM 18 C6 G B 59 -2.742 37.763 -10.261 1.00 33.52 C
ATOM 19 O6 G B 59 -3.014 37.849 -11.463 1.00 32.19 O
ATOM 20 N1 G B 59 -3.250 36.707 -9.510 1.00 34.85 N
ATOM 21 C2 G B 59 -3.009 36.517 -8.170 1.00 37.64 C
ATOM 22 N2 G B 59 -3.586 35.439 -7.620 1.00 32.18 N
ATOM 23 N3 G B 59 -2.260 37.326 -7.427 1.00 31.14 N
ATOM 24 C4 G B 59 -1.757 38.358 -8.148 1.00 31.41 C
ATOM 25 P C B 60 -2.508 37.597 -2.204 1.00 31.51 P
ATOM 26 OP1 C B 60 -2.320 36.244 -2.773 1.00 35.57 O
ATOM 27 OP2 C B 60 -3.871 38.131 -1.995 1.00 28.46 O
ATOM 28 O5' C B 60 -1.684 37.664 -0.832 1.00 32.43 O
TER
ATOM 2 P C A 60 -2.508 37.597 -2.204 1.00 31.51 P
ATOM 3 OP1 C A 60 -2.320 36.244 -2.773 1.00 35.57 O
ATOM 4 OP2 C A 60 -3.871 38.131 -1.995 1.00 28.46 O
ATOM 5 O5' C A 60 -1.684 37.664 -0.832 1.00 32.43 O
ATOM 6 C5' C A 60 -2.253 38.260 0.330 1.00 32.57 C
ATOM 7 C4' C A 60 -1.212 39.056 1.097 1.00 32.40 C
ATOM 8 O4' C A 60 -0.038 38.242 1.341 1.00 32.16 O
ATOM 9 C3' C A 60 -0.684 40.267 0.345 1.00 30.27 C
ATOM 10 O3' C A 60 -1.544 41.374 0.550 1.00 31.35 O
ATOM 11 C2' C A 60 0.674 40.475 1.003 1.00 34.03 C
ATOM 12 O2' C A 60 0.583 41.149 2.244 1.00 37.00 O
ATOM 13 C1' C A 60 1.130 39.034 1.208 1.00 34.15 C
ATOM 14 N1 C A 60 1.937 38.525 0.067 1.00 33.64 N
ATOM 15 C2 C A 60 3.228 39.027 -0.127 1.00 36.22 C
ATOM 16 O2 C A 60 3.667 39.878 0.657 1.00 36.20 O
ATOM 17 N3 C A 60 3.962 38.564 -1.167 1.00 31.60 N
ATOM 18 C4 C A 60 3.451 37.646 -1.990 1.00 32.33 C
ATOM 19 N4 C A 60 4.217 37.225 -3.001 1.00 29.84 N
ATOM 20 C5 C A 60 2.136 37.124 -1.811 1.00 28.51 C
ATOM 21 C6 C A 60 1.420 37.588 -0.780 1.00 32.93 C
ATOM 22 P C A 61 -1.642 42.523 -0.561 1.00 31.40 P
ATOM 23 OP1 C A 61 -2.712 43.446 -0.134 1.00 29.04 O
ATOM 24 OP2 C A 61 -1.702 41.894 -1.898 1.00 32.27 O
ATOM 25 O5' C A 61 -0.241 43.277 -0.431 1.00 35.04 O
TER
ATOM 1 O3' U B 58 1.126 33.504 -4.570 1.00 30.02 O
ATOM 2 P G B 59 2.050 34.687 -5.129 1.00 32.22 P
ATOM 3 OP1 G B 59 1.973 34.650 -6.604 1.00 35.10 O
ATOM 4 OP2 G B 59 3.371 34.612 -4.463 1.00 29.02 O
ATOM 5 O5' G B 59 1.337 36.011 -4.596 1.00 27.21 O
ATOM 6 C5' G B 59 -0.026 36.319 -4.835 1.00 30.08 C
ATOM 7 C4' G B 59 -0.160 37.829 -4.745 1.00 29.05 C
ATOM 8 O4' G B 59 0.300 38.390 -5.995 1.00 29.91 O
ATOM 9 C3' G B 59 -1.558 38.386 -4.526 1.00 29.32 C
ATOM 10 O3' G B 59 -1.738 38.632 -3.143 1.00 30.34 O
ATOM 11 C2' G B 59 -1.529 39.724 -5.261 1.00 32.19 C
ATOM 12 O2' G B 59 -1.157 40.772 -4.388 1.00 32.29 O
ATOM 13 C1' G B 59 -0.447 39.546 -6.320 1.00 29.37 C
ATOM 14 N9 G B 59 -0.949 39.373 -7.678 1.00 33.67 N
ATOM 15 C8 G B 59 -0.689 40.190 -8.751 1.00 29.77 C
ATOM 16 N7 G B 59 -1.260 39.787 -9.850 1.00 31.21 N
ATOM 17 C5 G B 59 -1.941 38.632 -9.484 1.00 32.78 C
ATOM 18 C6 G B 59 -2.742 37.763 -10.261 1.00 33.52 C
ATOM 19 O6 G B 59 -3.014 37.849 -11.463 1.00 32.19 O
ATOM 20 N1 G B 59 -3.250 36.707 -9.510 1.00 34.85 N
ATOM 21 C2 G B 59 -3.009 36.517 -8.170 1.00 37.64 C
ATOM 22 N2 G B 59 -3.586 35.439 -7.620 1.00 32.18 N
ATOM 23 N3 G B 59 -2.260 37.326 -7.427 1.00 31.14 N
ATOM 24 C4 G B 59 -1.757 38.358 -8.148 1.00 31.41 C
ATOM 25 P C B 60 -2.508 37.597 -2.204 1.00 31.51 P
ATOM 26 OP1 C B 60 -2.320 36.244 -2.773 1.00 35.57 O
ATOM 27 OP2 C B 60 -3.871 38.131 -1.995 1.00 28.46 O
ATOM 28 O5' C B 60 -1.684 37.664 -0.832 1.00 32.43 O
TER
Atoms:
C2: (3.228,39.027,-0.127)
OP1: (-2.320,36.244,-2.773)
OP2: (-3.871,38.131,-1.995)
C4: (3.451,37.646,-1.990)
O5': (-1.684,37.664,-0.832)
C3': (-0.684,40.267,0.345)
C1': (1.130,39.034,1.208)
O4': (-0.038,38.242,1.341)
C5': (-2.253,38.260,0.330)
P: (-2.508,37.597,-2.204)
O2: (3.667,39.878,0.657)
C4': (-1.212,39.056,1.097)
C2': (0.674,40.475,1.003)
O2': (0.583,41.149,2.244)
N1: (1.937,38.525,0.067)
N3: (3.962,38.564,-1.167)
N4: (4.217,37.225,-3.001)
C6: (1.420,37.588,-0.780)
C5: (2.136,37.124,-1.811)
O3': (-1.544,41.374,0.550)
OP1: (-2.320,36.244,-2.773)
OP2: (-3.871,38.131,-1.995)
C4: (3.451,37.646,-1.990)
O5': (-1.684,37.664,-0.832)
C3': (-0.684,40.267,0.345)
C1': (1.130,39.034,1.208)
O4': (-0.038,38.242,1.341)
C5': (-2.253,38.260,0.330)
P: (-2.508,37.597,-2.204)
O2: (3.667,39.878,0.657)
C4': (-1.212,39.056,1.097)
C2': (0.674,40.475,1.003)
O2': (0.583,41.149,2.244)
N1: (1.937,38.525,0.067)
N3: (3.962,38.564,-1.167)
N4: (4.217,37.225,-3.001)
C6: (1.420,37.588,-0.780)
C5: (2.136,37.124,-1.811)
O3': (-1.544,41.374,0.550)
OP1: (1.973,34.650,-6.604)
OP2: (3.371,34.612,-4.463)
C3': (-1.558,38.386,-4.526)
C1': (-0.447,39.546,-6.320)
C5': (-0.026,36.319,-4.835)
O6: (-3.014,37.849,-11.463)
O4': (0.300,38.390,-5.995)
C8: (-0.689,40.190,-8.751)
C2: (-3.009,36.517,-8.170)
C6: (-2.742,37.763,-10.261)
C5: (-1.941,38.632,-9.484)
C4: (-1.757,38.358,-8.148)
P: (2.050,34.687,-5.129)
C4': (-0.160,37.829,-4.745)
C2': (-1.529,39.724,-5.261)
O2': (-1.157,40.772,-4.388)
N1: (-3.250,36.707,-9.510)
N2: (-3.586,35.439,-7.620)
N3: (-2.260,37.326,-7.427)
N7: (-1.260,39.787,-9.850)
N9: (-0.949,39.373,-7.678)
O5': (1.337,36.011,-4.596)
O3': (-1.738,38.632,-3.143)
OP2: (3.371,34.612,-4.463)
C3': (-1.558,38.386,-4.526)
C1': (-0.447,39.546,-6.320)
C5': (-0.026,36.319,-4.835)
O6: (-3.014,37.849,-11.463)
O4': (0.300,38.390,-5.995)
C8: (-0.689,40.190,-8.751)
C2: (-3.009,36.517,-8.170)
C6: (-2.742,37.763,-10.261)
C5: (-1.941,38.632,-9.484)
C4: (-1.757,38.358,-8.148)
P: (2.050,34.687,-5.129)
C4': (-0.160,37.829,-4.745)
C2': (-1.529,39.724,-5.261)
O2': (-1.157,40.772,-4.388)
N1: (-3.250,36.707,-9.510)
N2: (-3.586,35.439,-7.620)
N3: (-2.260,37.326,-7.427)
N7: (-1.260,39.787,-9.850)
N9: (-0.949,39.373,-7.678)
O5': (1.337,36.011,-4.596)
O3': (-1.738,38.632,-3.143)
Image (generated by PyMOL):