Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A60:A59
Extra
PDB:
ATOM 1 O3' G A 59 0.196 -37.729 6.240 1.00 29.85 O
ATOM 2 P C A 60 -0.470 -37.437 4.818 1.00 27.69 P
ATOM 3 OP1 C A 60 -0.915 -36.028 4.845 1.00 28.41 O
ATOM 4 OP2 C A 60 -1.442 -38.504 4.490 1.00 26.99 O
ATOM 5 O5' C A 60 0.736 -37.554 3.799 1.00 27.59 O
ATOM 6 C5' C A 60 0.482 -37.902 2.435 1.00 26.88 C
ATOM 7 C4' C A 60 1.699 -38.537 1.839 1.00 26.44 C
ATOM 8 O4' C A 60 2.774 -37.567 1.830 1.00 26.72 O
ATOM 9 C3' C A 60 2.265 -39.699 2.632 1.00 26.69 C
ATOM 10 O3' C A 60 1.605 -40.917 2.368 1.00 26.06 O
ATOM 11 C2' C A 60 3.721 -39.711 2.201 1.00 26.91 C
ATOM 12 O2' C A 60 3.914 -40.327 0.941 1.00 28.76 O
ATOM 13 C1' C A 60 4.007 -38.219 2.069 1.00 26.43 C
ATOM 14 N1 C A 60 4.629 -37.662 3.285 1.00 25.38 N
ATOM 15 C2 C A 60 5.869 -38.169 3.680 1.00 26.00 C
ATOM 16 O2 C A 60 6.383 -39.071 3.002 1.00 26.31 O
ATOM 17 N3 C A 60 6.472 -37.672 4.790 1.00 25.62 N
ATOM 18 C4 C A 60 5.872 -36.717 5.503 1.00 25.37 C
ATOM 19 N4 C A 60 6.490 -36.277 6.597 1.00 24.32 N
ATOM 20 C5 C A 60 4.606 -36.177 5.123 1.00 25.64 C
ATOM 21 C6 C A 60 4.024 -36.675 4.017 1.00 25.98 C
ATOM 22 P C A 61 1.654 -42.085 3.465 1.00 26.11 P
ATOM 23 OP1 C A 61 0.851 -43.213 2.925 1.00 25.03 O
ATOM 24 OP2 C A 61 1.329 -41.517 4.796 1.00 25.53 O
ATOM 25 O5' C A 61 3.191 -42.499 3.501 1.00 25.28 O
TER
ATOM 1 O3' U B 58 2.575 -32.626 7.786 1.00 25.23 O
ATOM 2 P G B 59 3.528 -33.632 8.598 1.00 26.86 P
ATOM 3 OP1 G B 59 3.268 -33.381 10.037 1.00 26.96 O
ATOM 4 OP2 G B 59 4.918 -33.555 8.080 1.00 25.88 O
ATOM 5 O5' G B 59 2.998 -35.086 8.241 1.00 27.88 O
ATOM 6 C5' G B 59 1.761 -35.276 7.551 1.00 30.69 C
ATOM 7 C4' G B 59 1.020 -36.439 8.144 1.00 31.65 C
ATOM 8 O4' G B 59 0.406 -36.029 9.396 1.00 33.87 O
ATOM 9 C3' G B 59 -0.162 -36.914 7.329 1.00 32.44 C
ATOM 10 O3' G B 59 0.196 -37.729 6.240 1.00 29.85 O
ATOM 11 C2' G B 59 -1.009 -37.627 8.366 1.00 34.08 C
ATOM 12 O2' G B 59 -0.513 -38.917 8.665 1.00 35.10 O
ATOM 13 C1' G B 59 -0.837 -36.698 9.568 1.00 34.66 C
ATOM 14 N9 G B 59 -1.927 -35.720 9.631 1.00 36.69 N
ATOM 15 C8 G B 59 -3.267 -36.024 9.509 1.00 37.92 C
ATOM 16 N7 G B 59 -4.050 -34.984 9.611 1.00 38.37 N
ATOM 17 C5 G B 59 -3.183 -33.919 9.820 1.00 38.26 C
ATOM 18 C6 G B 59 -3.464 -32.552 10.030 1.00 38.12 C
ATOM 19 O6 G B 59 -4.562 -32.002 10.109 1.00 38.65 O
ATOM 20 N1 G B 59 -2.300 -31.803 10.180 1.00 38.77 N
ATOM 21 C2 G B 59 -1.019 -32.308 10.153 1.00 39.77 C
ATOM 22 N2 G B 59 -0.024 -31.403 10.313 1.00 39.01 N
ATOM 23 N3 G B 59 -0.739 -33.601 9.982 1.00 39.05 N
ATOM 24 C4 G B 59 -1.863 -34.345 9.822 1.00 37.75 C
ATOM 25 P C B 60 -0.470 -37.437 4.818 1.00 27.69 P
ATOM 26 OP1 C B 60 -0.915 -36.028 4.845 1.00 28.41 O
ATOM 27 OP2 C B 60 -1.442 -38.504 4.490 1.00 26.99 O
ATOM 28 O5' C B 60 0.736 -37.554 3.799 1.00 27.59 O
TER
ATOM 2 P C A 60 -0.470 -37.437 4.818 1.00 27.69 P
ATOM 3 OP1 C A 60 -0.915 -36.028 4.845 1.00 28.41 O
ATOM 4 OP2 C A 60 -1.442 -38.504 4.490 1.00 26.99 O
ATOM 5 O5' C A 60 0.736 -37.554 3.799 1.00 27.59 O
ATOM 6 C5' C A 60 0.482 -37.902 2.435 1.00 26.88 C
ATOM 7 C4' C A 60 1.699 -38.537 1.839 1.00 26.44 C
ATOM 8 O4' C A 60 2.774 -37.567 1.830 1.00 26.72 O
ATOM 9 C3' C A 60 2.265 -39.699 2.632 1.00 26.69 C
ATOM 10 O3' C A 60 1.605 -40.917 2.368 1.00 26.06 O
ATOM 11 C2' C A 60 3.721 -39.711 2.201 1.00 26.91 C
ATOM 12 O2' C A 60 3.914 -40.327 0.941 1.00 28.76 O
ATOM 13 C1' C A 60 4.007 -38.219 2.069 1.00 26.43 C
ATOM 14 N1 C A 60 4.629 -37.662 3.285 1.00 25.38 N
ATOM 15 C2 C A 60 5.869 -38.169 3.680 1.00 26.00 C
ATOM 16 O2 C A 60 6.383 -39.071 3.002 1.00 26.31 O
ATOM 17 N3 C A 60 6.472 -37.672 4.790 1.00 25.62 N
ATOM 18 C4 C A 60 5.872 -36.717 5.503 1.00 25.37 C
ATOM 19 N4 C A 60 6.490 -36.277 6.597 1.00 24.32 N
ATOM 20 C5 C A 60 4.606 -36.177 5.123 1.00 25.64 C
ATOM 21 C6 C A 60 4.024 -36.675 4.017 1.00 25.98 C
ATOM 22 P C A 61 1.654 -42.085 3.465 1.00 26.11 P
ATOM 23 OP1 C A 61 0.851 -43.213 2.925 1.00 25.03 O
ATOM 24 OP2 C A 61 1.329 -41.517 4.796 1.00 25.53 O
ATOM 25 O5' C A 61 3.191 -42.499 3.501 1.00 25.28 O
TER
ATOM 1 O3' U B 58 2.575 -32.626 7.786 1.00 25.23 O
ATOM 2 P G B 59 3.528 -33.632 8.598 1.00 26.86 P
ATOM 3 OP1 G B 59 3.268 -33.381 10.037 1.00 26.96 O
ATOM 4 OP2 G B 59 4.918 -33.555 8.080 1.00 25.88 O
ATOM 5 O5' G B 59 2.998 -35.086 8.241 1.00 27.88 O
ATOM 6 C5' G B 59 1.761 -35.276 7.551 1.00 30.69 C
ATOM 7 C4' G B 59 1.020 -36.439 8.144 1.00 31.65 C
ATOM 8 O4' G B 59 0.406 -36.029 9.396 1.00 33.87 O
ATOM 9 C3' G B 59 -0.162 -36.914 7.329 1.00 32.44 C
ATOM 10 O3' G B 59 0.196 -37.729 6.240 1.00 29.85 O
ATOM 11 C2' G B 59 -1.009 -37.627 8.366 1.00 34.08 C
ATOM 12 O2' G B 59 -0.513 -38.917 8.665 1.00 35.10 O
ATOM 13 C1' G B 59 -0.837 -36.698 9.568 1.00 34.66 C
ATOM 14 N9 G B 59 -1.927 -35.720 9.631 1.00 36.69 N
ATOM 15 C8 G B 59 -3.267 -36.024 9.509 1.00 37.92 C
ATOM 16 N7 G B 59 -4.050 -34.984 9.611 1.00 38.37 N
ATOM 17 C5 G B 59 -3.183 -33.919 9.820 1.00 38.26 C
ATOM 18 C6 G B 59 -3.464 -32.552 10.030 1.00 38.12 C
ATOM 19 O6 G B 59 -4.562 -32.002 10.109 1.00 38.65 O
ATOM 20 N1 G B 59 -2.300 -31.803 10.180 1.00 38.77 N
ATOM 21 C2 G B 59 -1.019 -32.308 10.153 1.00 39.77 C
ATOM 22 N2 G B 59 -0.024 -31.403 10.313 1.00 39.01 N
ATOM 23 N3 G B 59 -0.739 -33.601 9.982 1.00 39.05 N
ATOM 24 C4 G B 59 -1.863 -34.345 9.822 1.00 37.75 C
ATOM 25 P C B 60 -0.470 -37.437 4.818 1.00 27.69 P
ATOM 26 OP1 C B 60 -0.915 -36.028 4.845 1.00 28.41 O
ATOM 27 OP2 C B 60 -1.442 -38.504 4.490 1.00 26.99 O
ATOM 28 O5' C B 60 0.736 -37.554 3.799 1.00 27.59 O
TER
Atoms:
C2: (5.869,-38.169,3.680)
OP1: (-0.915,-36.028,4.845)
OP2: (-1.442,-38.504,4.490)
C4: (5.872,-36.717,5.503)
O5': (0.736,-37.554,3.799)
C3': (2.265,-39.699,2.632)
C1': (4.007,-38.219,2.069)
O4': (2.774,-37.567,1.830)
C5': (0.482,-37.902,2.435)
P: (-0.470,-37.437,4.818)
O2: (6.383,-39.071,3.002)
C4': (1.699,-38.537,1.839)
C2': (3.721,-39.711,2.201)
O2': (3.914,-40.327,0.941)
N1: (4.629,-37.662,3.285)
N3: (6.472,-37.672,4.790)
N4: (6.490,-36.277,6.597)
C6: (4.024,-36.675,4.017)
C5: (4.606,-36.177,5.123)
O3': (1.605,-40.917,2.368)
OP1: (-0.915,-36.028,4.845)
OP2: (-1.442,-38.504,4.490)
C4: (5.872,-36.717,5.503)
O5': (0.736,-37.554,3.799)
C3': (2.265,-39.699,2.632)
C1': (4.007,-38.219,2.069)
O4': (2.774,-37.567,1.830)
C5': (0.482,-37.902,2.435)
P: (-0.470,-37.437,4.818)
O2: (6.383,-39.071,3.002)
C4': (1.699,-38.537,1.839)
C2': (3.721,-39.711,2.201)
O2': (3.914,-40.327,0.941)
N1: (4.629,-37.662,3.285)
N3: (6.472,-37.672,4.790)
N4: (6.490,-36.277,6.597)
C6: (4.024,-36.675,4.017)
C5: (4.606,-36.177,5.123)
O3': (1.605,-40.917,2.368)
OP1: (3.268,-33.381,10.037)
OP2: (4.918,-33.555,8.080)
C3': (-0.162,-36.914,7.329)
C1': (-0.837,-36.698,9.568)
C5': (1.761,-35.276,7.551)
O6: (-4.562,-32.002,10.109)
O4': (0.406,-36.029,9.396)
C8: (-3.267,-36.024,9.509)
C2: (-1.019,-32.308,10.153)
C6: (-3.464,-32.552,10.030)
C5: (-3.183,-33.919,9.820)
C4: (-1.863,-34.345,9.822)
P: (3.528,-33.632,8.598)
C4': (1.020,-36.439,8.144)
C2': (-1.009,-37.627,8.366)
O2': (-0.513,-38.917,8.665)
N1: (-2.300,-31.803,10.180)
N2: (-0.024,-31.403,10.313)
N3: (-0.739,-33.601,9.982)
N7: (-4.050,-34.984,9.611)
N9: (-1.927,-35.720,9.631)
O5': (2.998,-35.086,8.241)
O3': (0.196,-37.729,6.240)
OP2: (4.918,-33.555,8.080)
C3': (-0.162,-36.914,7.329)
C1': (-0.837,-36.698,9.568)
C5': (1.761,-35.276,7.551)
O6: (-4.562,-32.002,10.109)
O4': (0.406,-36.029,9.396)
C8: (-3.267,-36.024,9.509)
C2: (-1.019,-32.308,10.153)
C6: (-3.464,-32.552,10.030)
C5: (-3.183,-33.919,9.820)
C4: (-1.863,-34.345,9.822)
P: (3.528,-33.632,8.598)
C4': (1.020,-36.439,8.144)
C2': (-1.009,-37.627,8.366)
O2': (-0.513,-38.917,8.665)
N1: (-2.300,-31.803,10.180)
N2: (-0.024,-31.403,10.313)
N3: (-0.739,-33.601,9.982)
N7: (-4.050,-34.984,9.611)
N9: (-1.927,-35.720,9.631)
O5': (2.998,-35.086,8.241)
O3': (0.196,-37.729,6.240)
Image (generated by PyMOL):