ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A2313:A2312

Extra

PDB:
ATOM 1 O3' G A2312 122.653 -42.542 19.247 1.00 54.50 O
ATOM 2 P C A2313 122.561 -43.076 17.744 1.00 65.74 P
ATOM 3 OP1 C A2313 121.648 -42.167 17.011 1.00 79.72 O
ATOM 4 OP2 C A2313 122.237 -44.521 17.805 1.00 70.94 O
ATOM 5 O5' C A2313 124.044 -42.871 17.240 1.00 58.34 O
ATOM 6 C5' C A2313 124.445 -43.330 15.977 1.00 57.76 C
ATOM 7 C4' C A2313 125.901 -43.655 15.971 1.00 47.93 C
ATOM 8 O4' C A2313 126.345 -43.905 17.315 1.00 39.92 O
ATOM 9 C3' C A2313 126.270 -44.907 15.214 1.00 60.27 C
ATOM 10 O3' C A2313 126.402 -44.664 13.842 1.00 69.59 O
ATOM 11 C2' C A2313 127.549 -45.357 15.881 1.00 46.11 C
ATOM 12 O2' C A2313 128.646 -44.598 15.404 1.00 53.66 O
ATOM 13 C1' C A2313 127.276 -44.967 17.326 1.00 44.36 C
ATOM 14 N1 C A2313 126.701 -46.086 18.102 1.00 40.17 N
ATOM 15 C2 C A2313 127.289 -47.337 18.066 1.00 36.60 C
ATOM 16 O2 C A2313 128.295 -47.507 17.377 1.00 44.49 O
ATOM 17 N3 C A2313 126.740 -48.332 18.793 1.00 43.85 N
ATOM 18 C4 C A2313 125.652 -48.126 19.542 1.00 46.06 C
ATOM 19 N4 C A2313 125.137 -49.132 20.248 1.00 48.51 N
ATOM 20 C5 C A2313 125.031 -46.863 19.607 1.00 45.91 C
ATOM 21 C6 C A2313 125.591 -45.889 18.877 1.00 50.93 C
ATOM 22 P G A2314 125.182 -44.991 12.889 1.00 43.12 P
ATOM 23 OP1 G A2314 125.198 -43.991 11.802 1.00 67.49 O
ATOM 24 OP2 G A2314 123.983 -45.105 13.745 1.00 57.00 O
ATOM 25 O5' G A2314 125.590 -46.426 12.332 1.00 65.01 O
TER

ATOM 1 O3' G B2311 121.687 -46.207 23.475 1.00 41.77 O
ATOM 2 P G B2312 121.701 -46.492 21.914 1.00 44.14 P
ATOM 3 OP1 G B2312 120.295 -46.701 21.480 1.00100.77 O
ATOM 4 OP2 G B2312 122.696 -47.558 21.672 1.00 76.64 O
ATOM 5 O5' G B2312 122.223 -45.131 21.354 1.00 50.60 O
ATOM 6 C5' G B2312 122.138 -43.955 22.136 1.00 55.50 C
ATOM 7 C4' G B2312 123.074 -42.918 21.606 1.00 46.39 C
ATOM 8 O4' G B2312 124.284 -42.922 22.392 1.00 52.51 O
ATOM 9 C3' G B2312 123.516 -43.165 20.180 1.00 45.66 C
ATOM 10 O3' G B2312 122.653 -42.542 19.247 1.00 54.50 O
ATOM 11 C2' G B2312 124.947 -42.654 20.145 1.00 46.48 C
ATOM 12 O2' G B2312 124.968 -41.257 19.923 1.00 59.92 O
ATOM 13 C1' G B2312 125.409 -42.920 21.571 1.00 41.63 C
ATOM 14 N9 G B2312 126.052 -44.219 21.725 1.00 40.33 N
ATOM 15 C8 G B2312 125.552 -45.242 22.482 1.00 46.51 C
ATOM 16 N7 G B2312 126.325 -46.289 22.474 1.00 53.84 N
ATOM 17 C5 G B2312 127.402 -45.906 21.677 1.00 50.58 C
ATOM 18 C6 G B2312 128.569 -46.610 21.303 1.00 45.81 C
ATOM 19 O6 G B2312 128.877 -47.761 21.615 1.00 53.43 O
ATOM 20 N1 G B2312 129.406 -45.852 20.499 1.00 46.17 N
ATOM 21 C2 G B2312 129.135 -44.565 20.101 1.00 47.50 C
ATOM 22 N2 G B2312 130.040 -43.958 19.314 1.00 44.78 N
ATOM 23 N3 G B2312 128.048 -43.897 20.440 1.00 44.44 N
ATOM 24 C4 G B2312 127.241 -44.625 21.220 1.00 44.24 C
ATOM 25 P C B2313 122.561 -43.076 17.744 1.00 65.74 P
ATOM 26 OP1 C B2313 121.648 -42.167 17.011 1.00 79.72 O
ATOM 27 OP2 C B2313 122.237 -44.521 17.805 1.00 70.94 O
ATOM 28 O5' C B2313 124.044 -42.871 17.240 1.00 58.34 O
TER

Atoms:
C2: (127.289,-47.337,18.066)
OP1: (121.648,-42.167,17.011)
OP2: (122.237,-44.521,17.805)
C4: (125.652,-48.126,19.542)
O5': (124.044,-42.871,17.240)
C3': (126.270,-44.907,15.214)
C1': (127.276,-44.967,17.326)
O4': (126.345,-43.905,17.315)
C5': (124.445,-43.330,15.977)
P: (122.561,-43.076,17.744)
O2: (128.295,-47.507,17.377)
C4': (125.901,-43.655,15.971)
C2': (127.549,-45.357,15.881)
O2': (128.646,-44.598,15.404)
N1: (126.701,-46.086,18.102)
N3: (126.740,-48.332,18.793)
N4: (125.137,-49.132,20.248)
C6: (125.591,-45.889,18.877)
C5: (125.031,-46.863,19.607)
O3': (126.402,-44.664,13.842)
OP1: (120.295,-46.701,21.480)
OP2: (122.696,-47.558,21.672)
C3': (123.516,-43.165,20.180)
C1': (125.409,-42.920,21.571)
C5': (122.138,-43.955,22.136)
O6: (128.877,-47.761,21.615)
O4': (124.284,-42.922,22.392)
C8: (125.552,-45.242,22.482)
C2: (129.135,-44.565,20.101)
C6: (128.569,-46.610,21.303)
C5: (127.402,-45.906,21.677)
C4: (127.241,-44.625,21.220)
P: (121.701,-46.492,21.914)
C4': (123.074,-42.918,21.606)
C2': (124.947,-42.654,20.145)
O2': (124.968,-41.257,19.923)
N1: (129.406,-45.852,20.499)
N2: (130.040,-43.958,19.314)
N3: (128.048,-43.897,20.440)
N7: (126.325,-46.289,22.474)
N9: (126.052,-44.219,21.725)
O5': (122.223,-45.131,21.354)
O3': (122.653,-42.542,19.247)
Image (generated by PyMOL):
PyMOL image
show in jmol