Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKW:A38:A10
Extra
PDB:
ATOM 1 O3' C A 37 18.685 -3.408 16.058 1.00 55.86 O
ATOM 2 P C A 38 17.332 -4.269 16.160 1.00 63.76 P
ATOM 3 OP1 C A 38 17.697 -5.706 16.031 1.00 65.35 O
ATOM 4 OP2 C A 38 16.382 -3.685 15.191 1.00 66.98 O
ATOM 5 O5' C A 38 16.848 -3.965 17.636 1.00 69.19 O
ATOM 6 C5' C A 38 16.607 -2.632 18.050 1.00 68.28 C
ATOM 7 C4' C A 38 17.182 -2.368 19.414 1.00 68.48 C
ATOM 8 O4' C A 38 18.634 -2.352 19.343 1.00 68.22 O
ATOM 9 C3' C A 38 16.828 -1.024 20.024 1.00 69.05 C
ATOM 10 O3' C A 38 15.546 -1.011 20.622 1.00 68.82 O
ATOM 11 C2' C A 38 17.966 -0.795 21.006 1.00 68.01 C
ATOM 12 O2' C A 38 17.780 -1.585 22.170 1.00 70.30 O
ATOM 13 C1' C A 38 19.146 -1.367 20.223 1.00 63.69 C
ATOM 14 N1 C A 38 19.832 -0.332 19.418 1.00 48.53 N
ATOM 15 C2 C A 38 20.396 0.785 20.032 1.00 43.43 C
ATOM 16 O2 C A 38 20.292 0.915 21.257 1.00 44.36 O
ATOM 17 N3 C A 38 21.030 1.706 19.272 1.00 41.17 N
ATOM 18 C4 C A 38 21.099 1.530 17.949 1.00 41.23 C
ATOM 19 N4 C A 38 21.713 2.443 17.208 1.00 41.63 N
ATOM 20 C5 C A 38 20.557 0.396 17.303 1.00 40.42 C
ATOM 21 C6 C A 38 19.937 -0.503 18.071 1.00 43.74 C
ATOM 22 P U A 39 14.478 0.113 20.203 1.00 79.04 P
ATOM 23 OP1 U A 39 13.141 -0.443 20.487 1.00 81.42 O
ATOM 24 OP2 U A 39 14.800 0.531 18.820 1.00 75.54 O
ATOM 25 O5' U A 39 14.791 1.306 21.204 1.00 61.35 O
TER
ATOM 1 O3' A B 9 20.984 2.256 11.864 1.00 48.24 O
ATOM 2 P G B 10 20.730 2.040 13.438 1.00 58.88 P
ATOM 3 OP1 G B 10 19.805 3.110 13.894 1.00 51.32 O
ATOM 4 OP2 G B 10 22.056 1.928 14.086 1.00 58.61 O
ATOM 5 O5' G B 10 19.990 0.631 13.476 1.00 40.04 O
ATOM 6 C5' G B 10 18.995 0.296 12.517 1.00 44.62 C
ATOM 7 C4' G B 10 19.545 -0.574 11.413 1.00 51.89 C
ATOM 8 O4' G B 10 19.900 -1.881 11.952 1.00 56.86 O
ATOM 9 C3' G B 10 18.590 -0.826 10.245 1.00 53.65 C
ATOM 10 O3' G B 10 19.225 -0.505 9.009 1.00 54.31 O
ATOM 11 C2' G B 10 18.293 -2.332 10.307 1.00 55.37 C
ATOM 12 O2' G B 10 18.157 -2.946 9.045 1.00 60.60 O
ATOM 13 C1' G B 10 19.483 -2.897 11.063 1.00 53.90 C
ATOM 14 N9 G B 10 19.164 -4.103 11.847 1.00 52.42 N
ATOM 15 C8 G B 10 18.235 -4.180 12.855 1.00 53.26 C
ATOM 16 N7 G B 10 18.139 -5.365 13.400 1.00 54.56 N
ATOM 17 C5 G B 10 19.063 -6.140 12.716 1.00 54.39 C
ATOM 18 C6 G B 10 19.405 -7.523 12.874 1.00 55.61 C
ATOM 19 O6 G B 10 18.916 -8.339 13.678 1.00 61.12 O
ATOM 20 N1 G B 10 20.400 -7.929 11.983 1.00 44.08 N
ATOM 21 C2 G B 10 20.956 -7.076 11.062 1.00 43.82 C
ATOM 22 N2 G B 10 21.889 -7.588 10.251 1.00 45.50 N
ATOM 23 N3 G B 10 20.649 -5.797 10.919 1.00 45.16 N
ATOM 24 C4 G B 10 19.696 -5.380 11.758 1.00 49.76 C
ATOM 25 P G B 11 18.462 0.438 7.943 1.00 60.31 P
ATOM 26 OP1 G B 11 18.230 1.746 8.606 1.00 50.43 O
ATOM 27 OP2 G B 11 17.293 -0.323 7.443 1.00 61.41 O
ATOM 28 O5' G B 11 19.530 0.591 6.776 1.00 37.64 O
TER
ATOM 2 P C A 38 17.332 -4.269 16.160 1.00 63.76 P
ATOM 3 OP1 C A 38 17.697 -5.706 16.031 1.00 65.35 O
ATOM 4 OP2 C A 38 16.382 -3.685 15.191 1.00 66.98 O
ATOM 5 O5' C A 38 16.848 -3.965 17.636 1.00 69.19 O
ATOM 6 C5' C A 38 16.607 -2.632 18.050 1.00 68.28 C
ATOM 7 C4' C A 38 17.182 -2.368 19.414 1.00 68.48 C
ATOM 8 O4' C A 38 18.634 -2.352 19.343 1.00 68.22 O
ATOM 9 C3' C A 38 16.828 -1.024 20.024 1.00 69.05 C
ATOM 10 O3' C A 38 15.546 -1.011 20.622 1.00 68.82 O
ATOM 11 C2' C A 38 17.966 -0.795 21.006 1.00 68.01 C
ATOM 12 O2' C A 38 17.780 -1.585 22.170 1.00 70.30 O
ATOM 13 C1' C A 38 19.146 -1.367 20.223 1.00 63.69 C
ATOM 14 N1 C A 38 19.832 -0.332 19.418 1.00 48.53 N
ATOM 15 C2 C A 38 20.396 0.785 20.032 1.00 43.43 C
ATOM 16 O2 C A 38 20.292 0.915 21.257 1.00 44.36 O
ATOM 17 N3 C A 38 21.030 1.706 19.272 1.00 41.17 N
ATOM 18 C4 C A 38 21.099 1.530 17.949 1.00 41.23 C
ATOM 19 N4 C A 38 21.713 2.443 17.208 1.00 41.63 N
ATOM 20 C5 C A 38 20.557 0.396 17.303 1.00 40.42 C
ATOM 21 C6 C A 38 19.937 -0.503 18.071 1.00 43.74 C
ATOM 22 P U A 39 14.478 0.113 20.203 1.00 79.04 P
ATOM 23 OP1 U A 39 13.141 -0.443 20.487 1.00 81.42 O
ATOM 24 OP2 U A 39 14.800 0.531 18.820 1.00 75.54 O
ATOM 25 O5' U A 39 14.791 1.306 21.204 1.00 61.35 O
TER
ATOM 1 O3' A B 9 20.984 2.256 11.864 1.00 48.24 O
ATOM 2 P G B 10 20.730 2.040 13.438 1.00 58.88 P
ATOM 3 OP1 G B 10 19.805 3.110 13.894 1.00 51.32 O
ATOM 4 OP2 G B 10 22.056 1.928 14.086 1.00 58.61 O
ATOM 5 O5' G B 10 19.990 0.631 13.476 1.00 40.04 O
ATOM 6 C5' G B 10 18.995 0.296 12.517 1.00 44.62 C
ATOM 7 C4' G B 10 19.545 -0.574 11.413 1.00 51.89 C
ATOM 8 O4' G B 10 19.900 -1.881 11.952 1.00 56.86 O
ATOM 9 C3' G B 10 18.590 -0.826 10.245 1.00 53.65 C
ATOM 10 O3' G B 10 19.225 -0.505 9.009 1.00 54.31 O
ATOM 11 C2' G B 10 18.293 -2.332 10.307 1.00 55.37 C
ATOM 12 O2' G B 10 18.157 -2.946 9.045 1.00 60.60 O
ATOM 13 C1' G B 10 19.483 -2.897 11.063 1.00 53.90 C
ATOM 14 N9 G B 10 19.164 -4.103 11.847 1.00 52.42 N
ATOM 15 C8 G B 10 18.235 -4.180 12.855 1.00 53.26 C
ATOM 16 N7 G B 10 18.139 -5.365 13.400 1.00 54.56 N
ATOM 17 C5 G B 10 19.063 -6.140 12.716 1.00 54.39 C
ATOM 18 C6 G B 10 19.405 -7.523 12.874 1.00 55.61 C
ATOM 19 O6 G B 10 18.916 -8.339 13.678 1.00 61.12 O
ATOM 20 N1 G B 10 20.400 -7.929 11.983 1.00 44.08 N
ATOM 21 C2 G B 10 20.956 -7.076 11.062 1.00 43.82 C
ATOM 22 N2 G B 10 21.889 -7.588 10.251 1.00 45.50 N
ATOM 23 N3 G B 10 20.649 -5.797 10.919 1.00 45.16 N
ATOM 24 C4 G B 10 19.696 -5.380 11.758 1.00 49.76 C
ATOM 25 P G B 11 18.462 0.438 7.943 1.00 60.31 P
ATOM 26 OP1 G B 11 18.230 1.746 8.606 1.00 50.43 O
ATOM 27 OP2 G B 11 17.293 -0.323 7.443 1.00 61.41 O
ATOM 28 O5' G B 11 19.530 0.591 6.776 1.00 37.64 O
TER
Atoms:
C2: (20.396,0.785,20.032)
OP1: (17.697,-5.706,16.031)
OP2: (16.382,-3.685,15.191)
C4: (21.099,1.530,17.949)
O5': (16.848,-3.965,17.636)
C3': (16.828,-1.024,20.024)
C1': (19.146,-1.367,20.223)
O4': (18.634,-2.352,19.343)
C5': (16.607,-2.632,18.050)
P: (17.332,-4.269,16.160)
O2: (20.292,0.915,21.257)
C4': (17.182,-2.368,19.414)
C2': (17.966,-0.795,21.006)
O2': (17.780,-1.585,22.170)
N1: (19.832,-0.332,19.418)
N3: (21.030,1.706,19.272)
N4: (21.713,2.443,17.208)
C6: (19.937,-0.503,18.071)
C5: (20.557,0.396,17.303)
O3': (15.546,-1.011,20.622)
OP1: (17.697,-5.706,16.031)
OP2: (16.382,-3.685,15.191)
C4: (21.099,1.530,17.949)
O5': (16.848,-3.965,17.636)
C3': (16.828,-1.024,20.024)
C1': (19.146,-1.367,20.223)
O4': (18.634,-2.352,19.343)
C5': (16.607,-2.632,18.050)
P: (17.332,-4.269,16.160)
O2: (20.292,0.915,21.257)
C4': (17.182,-2.368,19.414)
C2': (17.966,-0.795,21.006)
O2': (17.780,-1.585,22.170)
N1: (19.832,-0.332,19.418)
N3: (21.030,1.706,19.272)
N4: (21.713,2.443,17.208)
C6: (19.937,-0.503,18.071)
C5: (20.557,0.396,17.303)
O3': (15.546,-1.011,20.622)
OP1: (19.805,3.110,13.894)
OP2: (22.056,1.928,14.086)
C3': (18.590,-0.826,10.245)
C1': (19.483,-2.897,11.063)
C5': (18.995,0.296,12.517)
O6: (18.916,-8.339,13.678)
O4': (19.900,-1.881,11.952)
C8: (18.235,-4.180,12.855)
C2: (20.956,-7.076,11.062)
C6: (19.405,-7.523,12.874)
C5: (19.063,-6.140,12.716)
C4: (19.696,-5.380,11.758)
P: (20.730,2.040,13.438)
C4': (19.545,-0.574,11.413)
C2': (18.293,-2.332,10.307)
O2': (18.157,-2.946,9.045)
N1: (20.400,-7.929,11.983)
N2: (21.889,-7.588,10.251)
N3: (20.649,-5.797,10.919)
N7: (18.139,-5.365,13.400)
N9: (19.164,-4.103,11.847)
O5': (19.990,0.631,13.476)
O3': (19.225,-0.505,9.009)
OP2: (22.056,1.928,14.086)
C3': (18.590,-0.826,10.245)
C1': (19.483,-2.897,11.063)
C5': (18.995,0.296,12.517)
O6: (18.916,-8.339,13.678)
O4': (19.900,-1.881,11.952)
C8: (18.235,-4.180,12.855)
C2: (20.956,-7.076,11.062)
C6: (19.405,-7.523,12.874)
C5: (19.063,-6.140,12.716)
C4: (19.696,-5.380,11.758)
P: (20.730,2.040,13.438)
C4': (19.545,-0.574,11.413)
C2': (18.293,-2.332,10.307)
O2': (18.157,-2.946,9.045)
N1: (20.400,-7.929,11.983)
N2: (21.889,-7.588,10.251)
N3: (20.649,-5.797,10.919)
N7: (18.139,-5.365,13.400)
N9: (19.164,-4.103,11.847)
O5': (19.990,0.631,13.476)
O3': (19.225,-0.505,9.009)
Image (generated by PyMOL):