Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:190:188
Extra
PDB:
ATOM 1 O3' G A 89 35.104 -41.407 86.726 1.00 36.86 O
ATOM 2 P C A 90 35.969 -42.482 85.997 1.00 42.51 P
ATOM 3 OP1 C A 90 35.676 -42.336 84.567 1.00 42.32 O
ATOM 4 OP2 C A 90 35.688 -43.769 86.641 1.00 42.85 O
ATOM 5 O5' C A 90 37.456 -42.047 86.302 1.00 42.46 O
ATOM 6 C5' C A 90 38.288 -42.910 87.032 1.00 42.72 C
ATOM 7 C4' C A 90 39.647 -43.070 86.438 1.00 42.70 C
ATOM 8 O4' C A 90 40.561 -43.323 87.535 1.00 42.90 O
ATOM 9 C3' C A 90 39.795 -44.262 85.516 1.00 42.85 C
ATOM 10 O3' C A 90 40.940 -44.083 84.689 1.00 42.74 O
ATOM 11 C2' C A 90 40.079 -45.382 86.502 1.00 43.21 C
ATOM 12 O2' C A 90 40.714 -46.505 85.923 1.00 43.41 O
ATOM 13 C1' C A 90 40.992 -44.665 87.502 1.00 43.19 C
ATOM 14 N1 C A 90 40.963 -45.192 88.896 1.00 43.49 N
ATOM 15 C2 C A 90 41.873 -46.179 89.209 1.00 43.78 C
ATOM 16 O2 C A 90 42.580 -46.601 88.301 1.00 43.77 O
ATOM 17 N3 C A 90 41.960 -46.677 90.460 1.00 44.07 N
ATOM 18 C4 C A 90 41.203 -46.197 91.436 1.00 44.08 C
ATOM 19 N4 C A 90 41.398 -46.739 92.632 1.00 44.40 N
ATOM 20 C5 C A 90 40.284 -45.140 91.202 1.00 43.79 C
ATOM 21 C6 C A 90 40.218 -44.672 89.926 1.00 43.50 C
ATOM 22 P G A 91 40.766 -43.637 83.167 1.00 36.70 P
ATOM 23 OP1 G A 91 39.447 -44.175 82.697 1.00 36.75 O
ATOM 24 OP2 G A 91 41.989 -44.019 82.447 1.00 36.74 O
ATOM 25 O5' G A 91 40.650 -42.060 83.281 1.00 36.38 O
TER
ATOM 1 O3' C B 87 40.697 -44.082 96.237 1.00 39.77 O
ATOM 2 P G B 88 39.503 -44.147 95.147 1.00 35.44 P
ATOM 3 OP1 G B 88 38.298 -43.650 95.831 1.00 35.43 O
ATOM 4 OP2 G B 88 39.492 -45.518 94.561 1.00 35.63 O
ATOM 5 O5' G B 88 39.929 -43.101 94.049 1.00 35.04 O
ATOM 6 C5' G B 88 39.884 -41.720 94.313 1.00 34.81 C
ATOM 7 C4' G B 88 40.279 -40.954 93.102 1.00 34.46 C
ATOM 8 O4' G B 88 41.659 -41.209 92.775 1.00 34.49 O
ATOM 9 C3' G B 88 39.571 -41.339 91.832 1.00 34.33 C
ATOM 10 O3' G B 88 38.269 -40.846 91.814 1.00 34.21 O
ATOM 11 C2' G B 88 40.458 -40.715 90.785 1.00 34.06 C
ATOM 12 O2' G B 88 40.166 -39.342 90.719 1.00 33.79 O
ATOM 13 C1' G B 88 41.856 -40.898 91.416 1.00 34.23 C
ATOM 14 N9 G B 88 42.626 -41.979 90.789 1.00 34.37 N
ATOM 15 C8 G B 88 42.904 -43.282 91.193 1.00 34.70 C
ATOM 16 N7 G B 88 43.628 -43.999 90.328 1.00 34.75 N
ATOM 17 C5 G B 88 43.847 -43.050 89.305 1.00 34.41 C
ATOM 18 C6 G B 88 44.545 -43.134 88.088 1.00 34.29 C
ATOM 19 O6 G B 88 45.152 -44.079 87.595 1.00 34.45 O
ATOM 20 N1 G B 88 44.505 -41.953 87.396 1.00 33.95 N
ATOM 21 C2 G B 88 43.869 -40.800 87.765 1.00 33.75 C
ATOM 22 N2 G B 88 43.905 -39.766 86.884 1.00 33.44 N
ATOM 23 N3 G B 88 43.198 -40.717 88.900 1.00 33.87 N
ATOM 24 C4 G B 88 43.240 -41.844 89.591 1.00 34.18 C
ATOM 25 P G B 89 37.163 -41.384 90.775 1.00 37.39 P
ATOM 26 OP1 G B 89 35.954 -41.779 91.567 1.00 37.58 O
ATOM 27 OP2 G B 89 37.776 -42.374 89.899 1.00 37.46 O
ATOM 28 O5' G B 89 36.884 -40.052 90.015 1.00 37.02 O
TER
ATOM 2 P C A 90 35.969 -42.482 85.997 1.00 42.51 P
ATOM 3 OP1 C A 90 35.676 -42.336 84.567 1.00 42.32 O
ATOM 4 OP2 C A 90 35.688 -43.769 86.641 1.00 42.85 O
ATOM 5 O5' C A 90 37.456 -42.047 86.302 1.00 42.46 O
ATOM 6 C5' C A 90 38.288 -42.910 87.032 1.00 42.72 C
ATOM 7 C4' C A 90 39.647 -43.070 86.438 1.00 42.70 C
ATOM 8 O4' C A 90 40.561 -43.323 87.535 1.00 42.90 O
ATOM 9 C3' C A 90 39.795 -44.262 85.516 1.00 42.85 C
ATOM 10 O3' C A 90 40.940 -44.083 84.689 1.00 42.74 O
ATOM 11 C2' C A 90 40.079 -45.382 86.502 1.00 43.21 C
ATOM 12 O2' C A 90 40.714 -46.505 85.923 1.00 43.41 O
ATOM 13 C1' C A 90 40.992 -44.665 87.502 1.00 43.19 C
ATOM 14 N1 C A 90 40.963 -45.192 88.896 1.00 43.49 N
ATOM 15 C2 C A 90 41.873 -46.179 89.209 1.00 43.78 C
ATOM 16 O2 C A 90 42.580 -46.601 88.301 1.00 43.77 O
ATOM 17 N3 C A 90 41.960 -46.677 90.460 1.00 44.07 N
ATOM 18 C4 C A 90 41.203 -46.197 91.436 1.00 44.08 C
ATOM 19 N4 C A 90 41.398 -46.739 92.632 1.00 44.40 N
ATOM 20 C5 C A 90 40.284 -45.140 91.202 1.00 43.79 C
ATOM 21 C6 C A 90 40.218 -44.672 89.926 1.00 43.50 C
ATOM 22 P G A 91 40.766 -43.637 83.167 1.00 36.70 P
ATOM 23 OP1 G A 91 39.447 -44.175 82.697 1.00 36.75 O
ATOM 24 OP2 G A 91 41.989 -44.019 82.447 1.00 36.74 O
ATOM 25 O5' G A 91 40.650 -42.060 83.281 1.00 36.38 O
TER
ATOM 1 O3' C B 87 40.697 -44.082 96.237 1.00 39.77 O
ATOM 2 P G B 88 39.503 -44.147 95.147 1.00 35.44 P
ATOM 3 OP1 G B 88 38.298 -43.650 95.831 1.00 35.43 O
ATOM 4 OP2 G B 88 39.492 -45.518 94.561 1.00 35.63 O
ATOM 5 O5' G B 88 39.929 -43.101 94.049 1.00 35.04 O
ATOM 6 C5' G B 88 39.884 -41.720 94.313 1.00 34.81 C
ATOM 7 C4' G B 88 40.279 -40.954 93.102 1.00 34.46 C
ATOM 8 O4' G B 88 41.659 -41.209 92.775 1.00 34.49 O
ATOM 9 C3' G B 88 39.571 -41.339 91.832 1.00 34.33 C
ATOM 10 O3' G B 88 38.269 -40.846 91.814 1.00 34.21 O
ATOM 11 C2' G B 88 40.458 -40.715 90.785 1.00 34.06 C
ATOM 12 O2' G B 88 40.166 -39.342 90.719 1.00 33.79 O
ATOM 13 C1' G B 88 41.856 -40.898 91.416 1.00 34.23 C
ATOM 14 N9 G B 88 42.626 -41.979 90.789 1.00 34.37 N
ATOM 15 C8 G B 88 42.904 -43.282 91.193 1.00 34.70 C
ATOM 16 N7 G B 88 43.628 -43.999 90.328 1.00 34.75 N
ATOM 17 C5 G B 88 43.847 -43.050 89.305 1.00 34.41 C
ATOM 18 C6 G B 88 44.545 -43.134 88.088 1.00 34.29 C
ATOM 19 O6 G B 88 45.152 -44.079 87.595 1.00 34.45 O
ATOM 20 N1 G B 88 44.505 -41.953 87.396 1.00 33.95 N
ATOM 21 C2 G B 88 43.869 -40.800 87.765 1.00 33.75 C
ATOM 22 N2 G B 88 43.905 -39.766 86.884 1.00 33.44 N
ATOM 23 N3 G B 88 43.198 -40.717 88.900 1.00 33.87 N
ATOM 24 C4 G B 88 43.240 -41.844 89.591 1.00 34.18 C
ATOM 25 P G B 89 37.163 -41.384 90.775 1.00 37.39 P
ATOM 26 OP1 G B 89 35.954 -41.779 91.567 1.00 37.58 O
ATOM 27 OP2 G B 89 37.776 -42.374 89.899 1.00 37.46 O
ATOM 28 O5' G B 89 36.884 -40.052 90.015 1.00 37.02 O
TER
Atoms:
C2: (41.873,-46.179,89.209)
OP1: (35.676,-42.336,84.567)
OP2: (35.688,-43.769,86.641)
C4: (41.203,-46.197,91.436)
O5': (37.456,-42.047,86.302)
C3': (39.795,-44.262,85.516)
C1': (40.992,-44.665,87.502)
O4': (40.561,-43.323,87.535)
C5': (38.288,-42.910,87.032)
P: (35.969,-42.482,85.997)
O2: (42.580,-46.601,88.301)
C4': (39.647,-43.070,86.438)
C2': (40.079,-45.382,86.502)
O2': (40.714,-46.505,85.923)
N1: (40.963,-45.192,88.896)
N3: (41.960,-46.677,90.460)
N4: (41.398,-46.739,92.632)
C6: (40.218,-44.672,89.926)
C5: (40.284,-45.140,91.202)
O3': (40.940,-44.083,84.689)
OP1: (35.676,-42.336,84.567)
OP2: (35.688,-43.769,86.641)
C4: (41.203,-46.197,91.436)
O5': (37.456,-42.047,86.302)
C3': (39.795,-44.262,85.516)
C1': (40.992,-44.665,87.502)
O4': (40.561,-43.323,87.535)
C5': (38.288,-42.910,87.032)
P: (35.969,-42.482,85.997)
O2: (42.580,-46.601,88.301)
C4': (39.647,-43.070,86.438)
C2': (40.079,-45.382,86.502)
O2': (40.714,-46.505,85.923)
N1: (40.963,-45.192,88.896)
N3: (41.960,-46.677,90.460)
N4: (41.398,-46.739,92.632)
C6: (40.218,-44.672,89.926)
C5: (40.284,-45.140,91.202)
O3': (40.940,-44.083,84.689)
OP1: (38.298,-43.650,95.831)
OP2: (39.492,-45.518,94.561)
C3': (39.571,-41.339,91.832)
C1': (41.856,-40.898,91.416)
C5': (39.884,-41.720,94.313)
O6: (45.152,-44.079,87.595)
O4': (41.659,-41.209,92.775)
C8: (42.904,-43.282,91.193)
C2: (43.869,-40.800,87.765)
C6: (44.545,-43.134,88.088)
C5: (43.847,-43.050,89.305)
C4: (43.240,-41.844,89.591)
P: (39.503,-44.147,95.147)
C4': (40.279,-40.954,93.102)
C2': (40.458,-40.715,90.785)
O2': (40.166,-39.342,90.719)
N1: (44.505,-41.953,87.396)
N2: (43.905,-39.766,86.884)
N3: (43.198,-40.717,88.900)
N7: (43.628,-43.999,90.328)
N9: (42.626,-41.979,90.789)
O5': (39.929,-43.101,94.049)
O3': (38.269,-40.846,91.814)
OP2: (39.492,-45.518,94.561)
C3': (39.571,-41.339,91.832)
C1': (41.856,-40.898,91.416)
C5': (39.884,-41.720,94.313)
O6: (45.152,-44.079,87.595)
O4': (41.659,-41.209,92.775)
C8: (42.904,-43.282,91.193)
C2: (43.869,-40.800,87.765)
C6: (44.545,-43.134,88.088)
C5: (43.847,-43.050,89.305)
C4: (43.240,-41.844,89.591)
P: (39.503,-44.147,95.147)
C4': (40.279,-40.954,93.102)
C2': (40.458,-40.715,90.785)
O2': (40.166,-39.342,90.719)
N1: (44.505,-41.953,87.396)
N2: (43.905,-39.766,86.884)
N3: (43.198,-40.717,88.900)
N7: (43.628,-43.999,90.328)
N9: (42.626,-41.979,90.789)
O5': (39.929,-43.101,94.049)
O3': (38.269,-40.846,91.814)
Image (generated by PyMOL):