Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:357:356
Extra
PDB:
ATOM 1 O3' G A 56 13.659 -80.279 17.885 1.00 78.65 O
ATOM 2 P C A 57 14.625 -79.260 17.092 1.00 70.82 P
ATOM 3 OP1 C A 57 15.130 -78.265 18.104 1.00 69.63 O
ATOM 4 OP2 C A 57 13.870 -78.756 15.901 1.00 71.50 O
ATOM 5 O5' C A 57 15.817 -80.203 16.611 1.00 71.31 O
ATOM 6 C5' C A 57 16.601 -80.924 17.541 1.00 70.90 C
ATOM 7 C4' C A 57 17.380 -82.013 16.859 1.00 71.69 C
ATOM 8 O4' C A 57 16.460 -83.030 16.387 1.00 72.66 O
ATOM 9 C3' C A 57 18.154 -81.601 15.611 1.00 72.14 C
ATOM 10 O3' C A 57 19.407 -81.025 15.904 1.00 71.44 O
ATOM 11 C2' C A 57 18.265 -82.905 14.839 1.00 73.24 C
ATOM 12 O2' C A 57 19.318 -83.714 15.371 1.00 73.09 O
ATOM 13 C1' C A 57 16.908 -83.562 15.157 1.00 73.62 C
ATOM 14 N1 C A 57 15.875 -83.264 14.123 1.00 74.35 N
ATOM 15 C2 C A 57 15.861 -83.943 12.901 1.00 75.48 C
ATOM 16 O2 C A 57 16.723 -84.792 12.682 1.00 75.88 O
ATOM 17 N3 C A 57 14.920 -83.650 11.973 1.00 76.13 N
ATOM 18 C4 C A 57 14.004 -82.718 12.231 1.00 75.69 C
ATOM 19 N4 C A 57 13.097 -82.438 11.294 1.00 76.36 N
ATOM 20 C5 C A 57 13.983 -82.013 13.475 1.00 74.55 C
ATOM 21 C6 C A 57 14.923 -82.311 14.375 1.00 73.92 C
ATOM 22 P U A 58 19.885 -79.711 15.115 1.00 83.31 P
ATOM 23 OP1 U A 58 20.993 -79.087 15.905 1.00 82.31 O
ATOM 24 OP2 U A 58 18.656 -78.909 14.826 1.00 83.36 O
ATOM 25 O5' U A 58 20.450 -80.308 13.758 1.00 84.37 O
TER
ATOM 1 O3' A B 55 8.754 -80.887 14.278 1.00 77.04 O
ATOM 2 P G B 56 10.148 -80.401 13.685 1.00 82.10 P
ATOM 3 OP1 G B 56 10.083 -78.928 13.547 1.00 81.52 O
ATOM 4 OP2 G B 56 10.409 -81.219 12.481 1.00 83.21 O
ATOM 5 O5' G B 56 11.160 -80.787 14.847 1.00 81.33 O
ATOM 6 C5' G B 56 10.952 -80.319 16.174 1.00 80.32 C
ATOM 7 C4' G B 56 11.539 -81.259 17.196 1.00 79.99 C
ATOM 8 O4' G B 56 11.113 -82.620 16.927 1.00 80.90 O
ATOM 9 C3' G B 56 13.045 -81.362 17.221 1.00 79.70 C
ATOM 10 O3' G B 56 13.659 -80.279 17.885 1.00 78.65 O
ATOM 11 C2' G B 56 13.262 -82.701 17.919 1.00 79.85 C
ATOM 12 O2' G B 56 13.093 -82.577 19.318 1.00 78.96 O
ATOM 13 C1' G B 56 12.101 -83.526 17.374 1.00 80.84 C
ATOM 14 N9 G B 56 12.532 -84.380 16.248 1.00 81.87 N
ATOM 15 C8 G B 56 12.134 -84.363 14.938 1.00 82.78 C
ATOM 16 N7 G B 56 12.768 -85.253 14.221 1.00 83.55 N
ATOM 17 C5 G B 56 13.633 -85.900 15.087 1.00 83.13 C
ATOM 18 C6 G B 56 14.566 -86.956 14.873 1.00 83.61 C
ATOM 19 O6 G B 56 14.850 -87.583 13.833 1.00 84.55 O
ATOM 20 N1 G B 56 15.220 -87.285 16.051 1.00 82.88 N
ATOM 21 C2 G B 56 15.013 -86.689 17.255 1.00 81.85 C
ATOM 22 N2 G B 56 15.753 -87.157 18.262 1.00 81.29 N
ATOM 23 N3 G B 56 14.161 -85.717 17.464 1.00 81.41 N
ATOM 24 C4 G B 56 13.504 -85.367 16.345 1.00 82.09 C
ATOM 25 P C B 57 14.625 -79.260 17.092 1.00 70.82 P
ATOM 26 OP1 C B 57 15.130 -78.265 18.104 1.00 69.63 O
ATOM 27 OP2 C B 57 13.870 -78.756 15.901 1.00 71.50 O
ATOM 28 O5' C B 57 15.817 -80.203 16.611 1.00 71.31 O
TER
ATOM 2 P C A 57 14.625 -79.260 17.092 1.00 70.82 P
ATOM 3 OP1 C A 57 15.130 -78.265 18.104 1.00 69.63 O
ATOM 4 OP2 C A 57 13.870 -78.756 15.901 1.00 71.50 O
ATOM 5 O5' C A 57 15.817 -80.203 16.611 1.00 71.31 O
ATOM 6 C5' C A 57 16.601 -80.924 17.541 1.00 70.90 C
ATOM 7 C4' C A 57 17.380 -82.013 16.859 1.00 71.69 C
ATOM 8 O4' C A 57 16.460 -83.030 16.387 1.00 72.66 O
ATOM 9 C3' C A 57 18.154 -81.601 15.611 1.00 72.14 C
ATOM 10 O3' C A 57 19.407 -81.025 15.904 1.00 71.44 O
ATOM 11 C2' C A 57 18.265 -82.905 14.839 1.00 73.24 C
ATOM 12 O2' C A 57 19.318 -83.714 15.371 1.00 73.09 O
ATOM 13 C1' C A 57 16.908 -83.562 15.157 1.00 73.62 C
ATOM 14 N1 C A 57 15.875 -83.264 14.123 1.00 74.35 N
ATOM 15 C2 C A 57 15.861 -83.943 12.901 1.00 75.48 C
ATOM 16 O2 C A 57 16.723 -84.792 12.682 1.00 75.88 O
ATOM 17 N3 C A 57 14.920 -83.650 11.973 1.00 76.13 N
ATOM 18 C4 C A 57 14.004 -82.718 12.231 1.00 75.69 C
ATOM 19 N4 C A 57 13.097 -82.438 11.294 1.00 76.36 N
ATOM 20 C5 C A 57 13.983 -82.013 13.475 1.00 74.55 C
ATOM 21 C6 C A 57 14.923 -82.311 14.375 1.00 73.92 C
ATOM 22 P U A 58 19.885 -79.711 15.115 1.00 83.31 P
ATOM 23 OP1 U A 58 20.993 -79.087 15.905 1.00 82.31 O
ATOM 24 OP2 U A 58 18.656 -78.909 14.826 1.00 83.36 O
ATOM 25 O5' U A 58 20.450 -80.308 13.758 1.00 84.37 O
TER
ATOM 1 O3' A B 55 8.754 -80.887 14.278 1.00 77.04 O
ATOM 2 P G B 56 10.148 -80.401 13.685 1.00 82.10 P
ATOM 3 OP1 G B 56 10.083 -78.928 13.547 1.00 81.52 O
ATOM 4 OP2 G B 56 10.409 -81.219 12.481 1.00 83.21 O
ATOM 5 O5' G B 56 11.160 -80.787 14.847 1.00 81.33 O
ATOM 6 C5' G B 56 10.952 -80.319 16.174 1.00 80.32 C
ATOM 7 C4' G B 56 11.539 -81.259 17.196 1.00 79.99 C
ATOM 8 O4' G B 56 11.113 -82.620 16.927 1.00 80.90 O
ATOM 9 C3' G B 56 13.045 -81.362 17.221 1.00 79.70 C
ATOM 10 O3' G B 56 13.659 -80.279 17.885 1.00 78.65 O
ATOM 11 C2' G B 56 13.262 -82.701 17.919 1.00 79.85 C
ATOM 12 O2' G B 56 13.093 -82.577 19.318 1.00 78.96 O
ATOM 13 C1' G B 56 12.101 -83.526 17.374 1.00 80.84 C
ATOM 14 N9 G B 56 12.532 -84.380 16.248 1.00 81.87 N
ATOM 15 C8 G B 56 12.134 -84.363 14.938 1.00 82.78 C
ATOM 16 N7 G B 56 12.768 -85.253 14.221 1.00 83.55 N
ATOM 17 C5 G B 56 13.633 -85.900 15.087 1.00 83.13 C
ATOM 18 C6 G B 56 14.566 -86.956 14.873 1.00 83.61 C
ATOM 19 O6 G B 56 14.850 -87.583 13.833 1.00 84.55 O
ATOM 20 N1 G B 56 15.220 -87.285 16.051 1.00 82.88 N
ATOM 21 C2 G B 56 15.013 -86.689 17.255 1.00 81.85 C
ATOM 22 N2 G B 56 15.753 -87.157 18.262 1.00 81.29 N
ATOM 23 N3 G B 56 14.161 -85.717 17.464 1.00 81.41 N
ATOM 24 C4 G B 56 13.504 -85.367 16.345 1.00 82.09 C
ATOM 25 P C B 57 14.625 -79.260 17.092 1.00 70.82 P
ATOM 26 OP1 C B 57 15.130 -78.265 18.104 1.00 69.63 O
ATOM 27 OP2 C B 57 13.870 -78.756 15.901 1.00 71.50 O
ATOM 28 O5' C B 57 15.817 -80.203 16.611 1.00 71.31 O
TER
Atoms:
C2: (15.861,-83.943,12.901)
OP1: (15.130,-78.265,18.104)
OP2: (13.870,-78.756,15.901)
C4: (14.004,-82.718,12.231)
O5': (15.817,-80.203,16.611)
C3': (18.154,-81.601,15.611)
C1': (16.908,-83.562,15.157)
O4': (16.460,-83.030,16.387)
C5': (16.601,-80.924,17.541)
P: (14.625,-79.260,17.092)
O2: (16.723,-84.792,12.682)
C4': (17.380,-82.013,16.859)
C2': (18.265,-82.905,14.839)
O2': (19.318,-83.714,15.371)
N1: (15.875,-83.264,14.123)
N3: (14.920,-83.650,11.973)
N4: (13.097,-82.438,11.294)
C6: (14.923,-82.311,14.375)
C5: (13.983,-82.013,13.475)
O3': (19.407,-81.025,15.904)
OP1: (15.130,-78.265,18.104)
OP2: (13.870,-78.756,15.901)
C4: (14.004,-82.718,12.231)
O5': (15.817,-80.203,16.611)
C3': (18.154,-81.601,15.611)
C1': (16.908,-83.562,15.157)
O4': (16.460,-83.030,16.387)
C5': (16.601,-80.924,17.541)
P: (14.625,-79.260,17.092)
O2: (16.723,-84.792,12.682)
C4': (17.380,-82.013,16.859)
C2': (18.265,-82.905,14.839)
O2': (19.318,-83.714,15.371)
N1: (15.875,-83.264,14.123)
N3: (14.920,-83.650,11.973)
N4: (13.097,-82.438,11.294)
C6: (14.923,-82.311,14.375)
C5: (13.983,-82.013,13.475)
O3': (19.407,-81.025,15.904)
OP1: (10.083,-78.928,13.547)
OP2: (10.409,-81.219,12.481)
C3': (13.045,-81.362,17.221)
C1': (12.101,-83.526,17.374)
C5': (10.952,-80.319,16.174)
O6: (14.850,-87.583,13.833)
O4': (11.113,-82.620,16.927)
C8: (12.134,-84.363,14.938)
C2: (15.013,-86.689,17.255)
C6: (14.566,-86.956,14.873)
C5: (13.633,-85.900,15.087)
C4: (13.504,-85.367,16.345)
P: (10.148,-80.401,13.685)
C4': (11.539,-81.259,17.196)
C2': (13.262,-82.701,17.919)
O2': (13.093,-82.577,19.318)
N1: (15.220,-87.285,16.051)
N2: (15.753,-87.157,18.262)
N3: (14.161,-85.717,17.464)
N7: (12.768,-85.253,14.221)
N9: (12.532,-84.380,16.248)
O5': (11.160,-80.787,14.847)
O3': (13.659,-80.279,17.885)
OP2: (10.409,-81.219,12.481)
C3': (13.045,-81.362,17.221)
C1': (12.101,-83.526,17.374)
C5': (10.952,-80.319,16.174)
O6: (14.850,-87.583,13.833)
O4': (11.113,-82.620,16.927)
C8: (12.134,-84.363,14.938)
C2: (15.013,-86.689,17.255)
C6: (14.566,-86.956,14.873)
C5: (13.633,-85.900,15.087)
C4: (13.504,-85.367,16.345)
P: (10.148,-80.401,13.685)
C4': (11.539,-81.259,17.196)
C2': (13.262,-82.701,17.919)
O2': (13.093,-82.577,19.318)
N1: (15.220,-87.285,16.051)
N2: (15.753,-87.157,18.262)
N3: (14.161,-85.717,17.464)
N7: (12.768,-85.253,14.221)
N9: (12.532,-84.380,16.248)
O5': (11.160,-80.787,14.847)
O3': (13.659,-80.279,17.885)
Image (generated by PyMOL):