Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:6561:6573
Extra
PDB:
ATOM 1 O3' G A 560 231.051 1.267 275.763 1.00 70.18 O
ATOM 2 P C A 561 229.872 0.838 274.753 1.00 79.21 P
ATOM 3 OP1 C A 561 228.662 0.539 275.563 1.00 79.61 O
ATOM 4 OP2 C A 561 230.424 -0.226 273.870 1.00 79.16 O
ATOM 5 O5' C A 561 229.620 2.186 273.938 1.00 78.28 O
ATOM 6 C5' C A 561 230.583 2.703 273.049 1.00 77.79 C
ATOM 7 C4' C A 561 229.927 3.286 271.836 1.00 76.86 C
ATOM 8 O4' C A 561 230.953 3.816 270.977 1.00 76.43 O
ATOM 9 C3' C A 561 229.153 2.299 270.989 1.00 76.61 C
ATOM 10 O3' C A 561 228.191 3.016 270.225 1.00 75.87 O
ATOM 11 C2' C A 561 230.243 1.777 270.054 1.00 76.48 C
ATOM 12 O2' C A 561 229.768 1.217 268.845 1.00 76.01 O
ATOM 13 C1' C A 561 231.055 3.045 269.800 1.00 76.09 C
ATOM 14 N1 C A 561 232.481 2.813 269.575 1.00 76.31 N
ATOM 15 C2 C A 561 233.131 2.837 268.335 1.00 75.85 C
ATOM 16 O2 C A 561 232.547 2.987 267.270 1.00 75.21 O
ATOM 17 N3 C A 561 234.453 2.640 268.292 1.00 76.16 N
ATOM 18 C4 C A 561 235.126 2.457 269.434 1.00 76.90 C
ATOM 19 N4 C A 561 236.451 2.280 269.351 1.00 77.23 N
ATOM 20 C5 C A 561 234.496 2.464 270.718 1.00 77.39 C
ATOM 21 C6 C A 561 233.181 2.657 270.732 1.00 77.07 C
ATOM 22 P C A 562 226.659 3.167 270.706 1.00 59.63 P
ATOM 23 OP1 C A 562 226.120 1.807 270.910 1.00 60.11 O
ATOM 24 OP2 C A 562 225.985 4.064 269.718 1.00 58.79 O
ATOM 25 O5' C A 562 226.785 3.908 272.092 1.00 60.13 O
TER
ATOM 1 O3' G B 572 237.160 3.614 273.909 1.00 62.10 O
ATOM 2 P G B 573 237.500 2.100 273.504 1.00 95.33 P
ATOM 3 OP1 G B 573 238.213 1.520 274.625 1.00 96.31 O
ATOM 4 OP2 G B 573 238.150 2.118 272.187 1.00 94.79 O
ATOM 5 O5' G B 573 236.074 1.445 273.395 1.00 95.12 O
ATOM 6 C5' G B 573 235.147 1.549 274.463 1.00 95.47 C
ATOM 7 C4' G B 573 234.118 0.447 274.403 1.00 95.57 C
ATOM 8 O4' G B 573 233.376 0.531 273.145 1.00 94.69 O
ATOM 9 C3' G B 573 234.676 -0.965 274.384 1.00 96.14 C
ATOM 10 O3' G B 573 235.027 -1.463 275.646 1.00 97.11 O
ATOM 11 C2' G B 573 233.574 -1.741 273.687 1.00 95.79 C
ATOM 12 O2' G B 573 232.429 -1.851 274.527 1.00 96.09 O
ATOM 13 C1' G B 573 233.246 -0.762 272.582 1.00 94.79 C
ATOM 14 N9 G B 573 234.207 -0.873 271.469 1.00 94.44 N
ATOM 15 C8 G B 573 235.588 -0.829 271.489 1.00 94.73 C
ATOM 16 N7 G B 573 236.165 -0.947 270.332 1.00 94.32 N
ATOM 17 C5 G B 573 235.088 -1.064 269.481 1.00 93.70 C
ATOM 18 C6 G B 573 235.076 -1.224 268.076 1.00 93.09 C
ATOM 19 O6 G B 573 236.052 -1.283 267.305 1.00 92.98 O
ATOM 20 N1 G B 573 233.763 -1.316 267.593 1.00 92.63 N
ATOM 21 C2 G B 573 232.628 -1.260 268.384 1.00 92.76 C
ATOM 22 N2 G B 573 231.451 -1.374 267.758 1.00 92.31 N
ATOM 23 N3 G B 573 232.629 -1.104 269.704 1.00 93.33 N
ATOM 24 C4 G B 573 233.887 -1.016 270.164 1.00 93.77 C
ATOM 25 P U B 574 235.957 -2.750 275.727 1.00125.49 P
ATOM 26 OP1 U B 574 236.302 -3.128 274.331 1.00124.90 O
ATOM 27 OP2 U B 574 235.250 -3.731 276.579 1.00126.19 O
ATOM 28 O5' U B 574 237.249 -2.205 276.477 1.00126.04 O
TER
ATOM 2 P C A 561 229.872 0.838 274.753 1.00 79.21 P
ATOM 3 OP1 C A 561 228.662 0.539 275.563 1.00 79.61 O
ATOM 4 OP2 C A 561 230.424 -0.226 273.870 1.00 79.16 O
ATOM 5 O5' C A 561 229.620 2.186 273.938 1.00 78.28 O
ATOM 6 C5' C A 561 230.583 2.703 273.049 1.00 77.79 C
ATOM 7 C4' C A 561 229.927 3.286 271.836 1.00 76.86 C
ATOM 8 O4' C A 561 230.953 3.816 270.977 1.00 76.43 O
ATOM 9 C3' C A 561 229.153 2.299 270.989 1.00 76.61 C
ATOM 10 O3' C A 561 228.191 3.016 270.225 1.00 75.87 O
ATOM 11 C2' C A 561 230.243 1.777 270.054 1.00 76.48 C
ATOM 12 O2' C A 561 229.768 1.217 268.845 1.00 76.01 O
ATOM 13 C1' C A 561 231.055 3.045 269.800 1.00 76.09 C
ATOM 14 N1 C A 561 232.481 2.813 269.575 1.00 76.31 N
ATOM 15 C2 C A 561 233.131 2.837 268.335 1.00 75.85 C
ATOM 16 O2 C A 561 232.547 2.987 267.270 1.00 75.21 O
ATOM 17 N3 C A 561 234.453 2.640 268.292 1.00 76.16 N
ATOM 18 C4 C A 561 235.126 2.457 269.434 1.00 76.90 C
ATOM 19 N4 C A 561 236.451 2.280 269.351 1.00 77.23 N
ATOM 20 C5 C A 561 234.496 2.464 270.718 1.00 77.39 C
ATOM 21 C6 C A 561 233.181 2.657 270.732 1.00 77.07 C
ATOM 22 P C A 562 226.659 3.167 270.706 1.00 59.63 P
ATOM 23 OP1 C A 562 226.120 1.807 270.910 1.00 60.11 O
ATOM 24 OP2 C A 562 225.985 4.064 269.718 1.00 58.79 O
ATOM 25 O5' C A 562 226.785 3.908 272.092 1.00 60.13 O
TER
ATOM 1 O3' G B 572 237.160 3.614 273.909 1.00 62.10 O
ATOM 2 P G B 573 237.500 2.100 273.504 1.00 95.33 P
ATOM 3 OP1 G B 573 238.213 1.520 274.625 1.00 96.31 O
ATOM 4 OP2 G B 573 238.150 2.118 272.187 1.00 94.79 O
ATOM 5 O5' G B 573 236.074 1.445 273.395 1.00 95.12 O
ATOM 6 C5' G B 573 235.147 1.549 274.463 1.00 95.47 C
ATOM 7 C4' G B 573 234.118 0.447 274.403 1.00 95.57 C
ATOM 8 O4' G B 573 233.376 0.531 273.145 1.00 94.69 O
ATOM 9 C3' G B 573 234.676 -0.965 274.384 1.00 96.14 C
ATOM 10 O3' G B 573 235.027 -1.463 275.646 1.00 97.11 O
ATOM 11 C2' G B 573 233.574 -1.741 273.687 1.00 95.79 C
ATOM 12 O2' G B 573 232.429 -1.851 274.527 1.00 96.09 O
ATOM 13 C1' G B 573 233.246 -0.762 272.582 1.00 94.79 C
ATOM 14 N9 G B 573 234.207 -0.873 271.469 1.00 94.44 N
ATOM 15 C8 G B 573 235.588 -0.829 271.489 1.00 94.73 C
ATOM 16 N7 G B 573 236.165 -0.947 270.332 1.00 94.32 N
ATOM 17 C5 G B 573 235.088 -1.064 269.481 1.00 93.70 C
ATOM 18 C6 G B 573 235.076 -1.224 268.076 1.00 93.09 C
ATOM 19 O6 G B 573 236.052 -1.283 267.305 1.00 92.98 O
ATOM 20 N1 G B 573 233.763 -1.316 267.593 1.00 92.63 N
ATOM 21 C2 G B 573 232.628 -1.260 268.384 1.00 92.76 C
ATOM 22 N2 G B 573 231.451 -1.374 267.758 1.00 92.31 N
ATOM 23 N3 G B 573 232.629 -1.104 269.704 1.00 93.33 N
ATOM 24 C4 G B 573 233.887 -1.016 270.164 1.00 93.77 C
ATOM 25 P U B 574 235.957 -2.750 275.727 1.00125.49 P
ATOM 26 OP1 U B 574 236.302 -3.128 274.331 1.00124.90 O
ATOM 27 OP2 U B 574 235.250 -3.731 276.579 1.00126.19 O
ATOM 28 O5' U B 574 237.249 -2.205 276.477 1.00126.04 O
TER
Atoms:
C2: (233.131,2.837,268.335)
OP1: (228.662,0.539,275.563)
OP2: (230.424,-0.226,273.870)
C4: (235.126,2.457,269.434)
O5': (229.620,2.186,273.938)
C3': (229.153,2.299,270.989)
C1': (231.055,3.045,269.800)
O4': (230.953,3.816,270.977)
C5': (230.583,2.703,273.049)
P: (229.872,0.838,274.753)
O2: (232.547,2.987,267.270)
C4': (229.927,3.286,271.836)
C2': (230.243,1.777,270.054)
O2': (229.768,1.217,268.845)
N1: (232.481,2.813,269.575)
N3: (234.453,2.640,268.292)
N4: (236.451,2.280,269.351)
C6: (233.181,2.657,270.732)
C5: (234.496,2.464,270.718)
O3': (228.191,3.016,270.225)
OP1: (228.662,0.539,275.563)
OP2: (230.424,-0.226,273.870)
C4: (235.126,2.457,269.434)
O5': (229.620,2.186,273.938)
C3': (229.153,2.299,270.989)
C1': (231.055,3.045,269.800)
O4': (230.953,3.816,270.977)
C5': (230.583,2.703,273.049)
P: (229.872,0.838,274.753)
O2: (232.547,2.987,267.270)
C4': (229.927,3.286,271.836)
C2': (230.243,1.777,270.054)
O2': (229.768,1.217,268.845)
N1: (232.481,2.813,269.575)
N3: (234.453,2.640,268.292)
N4: (236.451,2.280,269.351)
C6: (233.181,2.657,270.732)
C5: (234.496,2.464,270.718)
O3': (228.191,3.016,270.225)
OP1: (238.213,1.520,274.625)
OP2: (238.150,2.118,272.187)
C3': (234.676,-0.965,274.384)
C1': (233.246,-0.762,272.582)
C5': (235.147,1.549,274.463)
O6: (236.052,-1.283,267.305)
O4': (233.376,0.531,273.145)
C8: (235.588,-0.829,271.489)
C2: (232.628,-1.260,268.384)
C6: (235.076,-1.224,268.076)
C5: (235.088,-1.064,269.481)
C4: (233.887,-1.016,270.164)
P: (237.500,2.100,273.504)
C4': (234.118,0.447,274.403)
C2': (233.574,-1.741,273.687)
O2': (232.429,-1.851,274.527)
N1: (233.763,-1.316,267.593)
N2: (231.451,-1.374,267.758)
N3: (232.629,-1.104,269.704)
N7: (236.165,-0.947,270.332)
N9: (234.207,-0.873,271.469)
O5': (236.074,1.445,273.395)
O3': (235.027,-1.463,275.646)
OP2: (238.150,2.118,272.187)
C3': (234.676,-0.965,274.384)
C1': (233.246,-0.762,272.582)
C5': (235.147,1.549,274.463)
O6: (236.052,-1.283,267.305)
O4': (233.376,0.531,273.145)
C8: (235.588,-0.829,271.489)
C2: (232.628,-1.260,268.384)
C6: (235.076,-1.224,268.076)
C5: (235.088,-1.064,269.481)
C4: (233.887,-1.016,270.164)
P: (237.500,2.100,273.504)
C4': (234.118,0.447,274.403)
C2': (233.574,-1.741,273.687)
O2': (232.429,-1.851,274.527)
N1: (233.763,-1.316,267.593)
N2: (231.451,-1.374,267.758)
N3: (232.629,-1.104,269.704)
N7: (236.165,-0.947,270.332)
N9: (234.207,-0.873,271.469)
O5': (236.074,1.445,273.395)
O3': (235.027,-1.463,275.646)
Image (generated by PyMOL):