Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1I9V:A60:A59
Extra
PDB:
ATOM 1 O3' C A 59 19.693 -7.528 -8.774 1.00 29.75 O
ATOM 2 P C A 60 19.281 -7.359 -10.319 1.00 31.28 P
ATOM 3 OP1 C A 60 20.024 -6.192 -10.860 1.00 31.14 O
ATOM 4 OP2 C A 60 17.782 -7.404 -10.399 1.00 31.28 O
ATOM 5 O5' C A 60 19.820 -8.683 -11.009 1.00 32.67 O
ATOM 6 C5' C A 60 20.724 -8.629 -12.089 1.00 31.98 C
ATOM 7 C4' C A 60 20.653 -9.912 -12.858 1.00 31.91 C
ATOM 8 O4' C A 60 20.868 -10.993 -11.930 1.00 31.52 O
ATOM 9 C3' C A 60 19.308 -10.238 -13.476 1.00 31.90 C
ATOM 10 O3' C A 60 19.175 -9.614 -14.738 1.00 35.58 O
ATOM 11 C2' C A 60 19.406 -11.742 -13.640 1.00 32.04 C
ATOM 12 O2' C A 60 20.177 -12.092 -14.779 1.00 32.12 O
ATOM 13 C1' C A 60 20.127 -12.131 -12.345 1.00 29.91 C
ATOM 14 N1 C A 60 19.234 -12.513 -11.240 1.00 28.15 N
ATOM 15 C2 C A 60 18.363 -13.608 -11.406 1.00 28.50 C
ATOM 16 O2 C A 60 18.356 -14.204 -12.480 1.00 30.43 O
ATOM 17 N3 C A 60 17.545 -13.966 -10.393 1.00 28.04 N
ATOM 18 C4 C A 60 17.552 -13.259 -9.257 1.00 27.77 C
ATOM 19 N4 C A 60 16.716 -13.614 -8.299 1.00 26.13 N
ATOM 20 C5 C A 60 18.424 -12.137 -9.060 1.00 27.46 C
ATOM 21 C6 C A 60 19.241 -11.807 -10.065 1.00 27.55 C
ATOM 22 P A A 61 17.751 -9.040 -15.198 1.00 38.12 P
ATOM 23 OP1 A A 61 18.071 -8.105 -16.299 1.00 37.13 O
ATOM 24 OP2 A A 61 17.077 -8.535 -13.974 1.00 37.87 O
ATOM 25 O5' A A 61 16.952 -10.300 -15.774 1.00 36.10 O
TER
ATOM 1 O3' U B 58 15.566 -10.383 -4.327 1.00 27.70 O
ATOM 2 P C B 59 16.260 -10.984 -5.654 1.00 30.23 P
ATOM 3 OP1 C B 59 15.155 -10.862 -6.597 1.00 29.66 O
ATOM 4 OP2 C B 59 16.821 -12.300 -5.328 1.00 29.06 O
ATOM 5 O5' C B 59 17.393 -9.940 -6.006 1.00 30.03 O
ATOM 6 C5' C B 59 17.038 -8.660 -6.475 1.00 30.53 C
ATOM 7 C4' C B 59 18.264 -7.920 -6.892 1.00 30.92 C
ATOM 8 O4' C B 59 19.133 -7.843 -5.737 1.00 31.73 O
ATOM 9 C3' C B 59 19.089 -8.550 -8.004 1.00 30.49 C
ATOM 10 O3' C B 59 19.693 -7.528 -8.774 1.00 29.75 O
ATOM 11 C2' C B 59 20.171 -9.299 -7.246 1.00 31.39 C
ATOM 12 O2' C B 59 21.385 -9.428 -7.960 1.00 34.48 O
ATOM 13 C1' C B 59 20.392 -8.383 -6.053 1.00 30.78 C
ATOM 14 N1 C B 59 20.852 -9.125 -4.889 1.00 30.62 N
ATOM 15 C2 C B 59 21.952 -8.659 -4.184 1.00 29.00 C
ATOM 16 O2 C B 59 22.511 -7.612 -4.557 1.00 28.12 O
ATOM 17 N3 C B 59 22.379 -9.352 -3.119 1.00 28.02 N
ATOM 18 C4 C B 59 21.753 -10.462 -2.751 1.00 28.06 C
ATOM 19 N4 C B 59 22.220 -11.115 -1.701 1.00 31.34 N
ATOM 20 C5 C B 59 20.622 -10.954 -3.443 1.00 30.44 C
ATOM 21 C6 C B 59 20.206 -10.264 -4.496 1.00 31.10 C
ATOM 22 P C B 60 19.281 -7.359 -10.319 1.00 31.28 P
ATOM 23 OP1 C B 60 20.024 -6.192 -10.860 1.00 31.14 O
ATOM 24 OP2 C B 60 17.782 -7.404 -10.399 1.00 31.28 O
ATOM 25 O5' C B 60 19.820 -8.683 -11.009 1.00 32.67 O
TER
ATOM 2 P C A 60 19.281 -7.359 -10.319 1.00 31.28 P
ATOM 3 OP1 C A 60 20.024 -6.192 -10.860 1.00 31.14 O
ATOM 4 OP2 C A 60 17.782 -7.404 -10.399 1.00 31.28 O
ATOM 5 O5' C A 60 19.820 -8.683 -11.009 1.00 32.67 O
ATOM 6 C5' C A 60 20.724 -8.629 -12.089 1.00 31.98 C
ATOM 7 C4' C A 60 20.653 -9.912 -12.858 1.00 31.91 C
ATOM 8 O4' C A 60 20.868 -10.993 -11.930 1.00 31.52 O
ATOM 9 C3' C A 60 19.308 -10.238 -13.476 1.00 31.90 C
ATOM 10 O3' C A 60 19.175 -9.614 -14.738 1.00 35.58 O
ATOM 11 C2' C A 60 19.406 -11.742 -13.640 1.00 32.04 C
ATOM 12 O2' C A 60 20.177 -12.092 -14.779 1.00 32.12 O
ATOM 13 C1' C A 60 20.127 -12.131 -12.345 1.00 29.91 C
ATOM 14 N1 C A 60 19.234 -12.513 -11.240 1.00 28.15 N
ATOM 15 C2 C A 60 18.363 -13.608 -11.406 1.00 28.50 C
ATOM 16 O2 C A 60 18.356 -14.204 -12.480 1.00 30.43 O
ATOM 17 N3 C A 60 17.545 -13.966 -10.393 1.00 28.04 N
ATOM 18 C4 C A 60 17.552 -13.259 -9.257 1.00 27.77 C
ATOM 19 N4 C A 60 16.716 -13.614 -8.299 1.00 26.13 N
ATOM 20 C5 C A 60 18.424 -12.137 -9.060 1.00 27.46 C
ATOM 21 C6 C A 60 19.241 -11.807 -10.065 1.00 27.55 C
ATOM 22 P A A 61 17.751 -9.040 -15.198 1.00 38.12 P
ATOM 23 OP1 A A 61 18.071 -8.105 -16.299 1.00 37.13 O
ATOM 24 OP2 A A 61 17.077 -8.535 -13.974 1.00 37.87 O
ATOM 25 O5' A A 61 16.952 -10.300 -15.774 1.00 36.10 O
TER
ATOM 1 O3' U B 58 15.566 -10.383 -4.327 1.00 27.70 O
ATOM 2 P C B 59 16.260 -10.984 -5.654 1.00 30.23 P
ATOM 3 OP1 C B 59 15.155 -10.862 -6.597 1.00 29.66 O
ATOM 4 OP2 C B 59 16.821 -12.300 -5.328 1.00 29.06 O
ATOM 5 O5' C B 59 17.393 -9.940 -6.006 1.00 30.03 O
ATOM 6 C5' C B 59 17.038 -8.660 -6.475 1.00 30.53 C
ATOM 7 C4' C B 59 18.264 -7.920 -6.892 1.00 30.92 C
ATOM 8 O4' C B 59 19.133 -7.843 -5.737 1.00 31.73 O
ATOM 9 C3' C B 59 19.089 -8.550 -8.004 1.00 30.49 C
ATOM 10 O3' C B 59 19.693 -7.528 -8.774 1.00 29.75 O
ATOM 11 C2' C B 59 20.171 -9.299 -7.246 1.00 31.39 C
ATOM 12 O2' C B 59 21.385 -9.428 -7.960 1.00 34.48 O
ATOM 13 C1' C B 59 20.392 -8.383 -6.053 1.00 30.78 C
ATOM 14 N1 C B 59 20.852 -9.125 -4.889 1.00 30.62 N
ATOM 15 C2 C B 59 21.952 -8.659 -4.184 1.00 29.00 C
ATOM 16 O2 C B 59 22.511 -7.612 -4.557 1.00 28.12 O
ATOM 17 N3 C B 59 22.379 -9.352 -3.119 1.00 28.02 N
ATOM 18 C4 C B 59 21.753 -10.462 -2.751 1.00 28.06 C
ATOM 19 N4 C B 59 22.220 -11.115 -1.701 1.00 31.34 N
ATOM 20 C5 C B 59 20.622 -10.954 -3.443 1.00 30.44 C
ATOM 21 C6 C B 59 20.206 -10.264 -4.496 1.00 31.10 C
ATOM 22 P C B 60 19.281 -7.359 -10.319 1.00 31.28 P
ATOM 23 OP1 C B 60 20.024 -6.192 -10.860 1.00 31.14 O
ATOM 24 OP2 C B 60 17.782 -7.404 -10.399 1.00 31.28 O
ATOM 25 O5' C B 60 19.820 -8.683 -11.009 1.00 32.67 O
TER
Atoms:
C2: (18.363,-13.608,-11.406)
OP1: (20.024,-6.192,-10.860)
OP2: (17.782,-7.404,-10.399)
C4: (17.552,-13.259,-9.257)
O5': (19.820,-8.683,-11.009)
C3': (19.308,-10.238,-13.476)
C1': (20.127,-12.131,-12.345)
O4': (20.868,-10.993,-11.930)
C5': (20.724,-8.629,-12.089)
P: (19.281,-7.359,-10.319)
O2: (18.356,-14.204,-12.480)
C4': (20.653,-9.912,-12.858)
C2': (19.406,-11.742,-13.640)
O2': (20.177,-12.092,-14.779)
N1: (19.234,-12.513,-11.240)
N3: (17.545,-13.966,-10.393)
N4: (16.716,-13.614,-8.299)
C6: (19.241,-11.807,-10.065)
C5: (18.424,-12.137,-9.060)
O3': (19.175,-9.614,-14.738)
OP1: (20.024,-6.192,-10.860)
OP2: (17.782,-7.404,-10.399)
C4: (17.552,-13.259,-9.257)
O5': (19.820,-8.683,-11.009)
C3': (19.308,-10.238,-13.476)
C1': (20.127,-12.131,-12.345)
O4': (20.868,-10.993,-11.930)
C5': (20.724,-8.629,-12.089)
P: (19.281,-7.359,-10.319)
O2: (18.356,-14.204,-12.480)
C4': (20.653,-9.912,-12.858)
C2': (19.406,-11.742,-13.640)
O2': (20.177,-12.092,-14.779)
N1: (19.234,-12.513,-11.240)
N3: (17.545,-13.966,-10.393)
N4: (16.716,-13.614,-8.299)
C6: (19.241,-11.807,-10.065)
C5: (18.424,-12.137,-9.060)
O3': (19.175,-9.614,-14.738)
C2: (21.952,-8.659,-4.184)
OP1: (15.155,-10.862,-6.597)
OP2: (16.821,-12.300,-5.328)
C4: (21.753,-10.462,-2.751)
O5': (17.393,-9.940,-6.006)
C3': (19.089,-8.550,-8.004)
C1': (20.392,-8.383,-6.053)
O4': (19.133,-7.843,-5.737)
C5': (17.038,-8.660,-6.475)
P: (16.260,-10.984,-5.654)
O2: (22.511,-7.612,-4.557)
C4': (18.264,-7.920,-6.892)
C2': (20.171,-9.299,-7.246)
O2': (21.385,-9.428,-7.960)
N1: (20.852,-9.125,-4.889)
N3: (22.379,-9.352,-3.119)
N4: (22.220,-11.115,-1.701)
C6: (20.206,-10.264,-4.496)
C5: (20.622,-10.954,-3.443)
O3': (19.693,-7.528,-8.774)
OP1: (15.155,-10.862,-6.597)
OP2: (16.821,-12.300,-5.328)
C4: (21.753,-10.462,-2.751)
O5': (17.393,-9.940,-6.006)
C3': (19.089,-8.550,-8.004)
C1': (20.392,-8.383,-6.053)
O4': (19.133,-7.843,-5.737)
C5': (17.038,-8.660,-6.475)
P: (16.260,-10.984,-5.654)
O2: (22.511,-7.612,-4.557)
C4': (18.264,-7.920,-6.892)
C2': (20.171,-9.299,-7.246)
O2': (21.385,-9.428,-7.960)
N1: (20.852,-9.125,-4.889)
N3: (22.379,-9.352,-3.119)
N4: (22.220,-11.115,-1.701)
C6: (20.206,-10.264,-4.496)
C5: (20.622,-10.954,-3.443)
O3': (19.693,-7.528,-8.774)
Image (generated by PyMOL):