Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01354:01353
Extra
PDB:
ATOM 1 O3' C A1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 2 P C A1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 3 OP1 C A1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 4 OP2 C A1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 5 O5' C A1354 56.012 177.005 80.399 1.00 36.50 O
ATOM 6 C5' C A1354 56.207 176.746 79.010 1.00 36.12 C
ATOM 7 C4' C A1354 55.779 177.937 78.199 1.00 36.88 C
ATOM 8 O4' C A1354 54.358 178.151 78.373 1.00 36.85 O
ATOM 9 C3' C A1354 56.393 179.268 78.590 1.00 37.55 C
ATOM 10 O3' C A1354 57.688 179.425 78.032 1.00 37.31 O
ATOM 11 C2' C A1354 55.396 180.251 78.000 1.00 38.55 C
ATOM 12 O2' C A1354 55.535 180.384 76.598 1.00 42.16 O
ATOM 13 C1' C A1354 54.078 179.536 78.290 1.00 37.45 C
ATOM 14 N1 C A1354 53.447 179.968 79.547 1.00 37.89 N
ATOM 15 C2 C A1354 52.848 181.231 79.593 1.00 38.85 C
ATOM 16 O2 C A1354 52.898 181.957 78.586 1.00 41.96 O
ATOM 17 N3 C A1354 52.235 181.628 80.728 1.00 37.30 N
ATOM 18 C4 C A1354 52.210 180.823 81.791 1.00 35.81 C
ATOM 19 N4 C A1354 51.576 181.251 82.883 1.00 34.27 N
ATOM 20 C5 C A1354 52.828 179.542 81.779 1.00 35.33 C
ATOM 21 C6 C A1354 53.430 179.158 80.648 1.00 36.53 C
ATOM 22 P C A1355 58.829 180.172 78.877 1.00 39.16 P
ATOM 23 OP1 C A1355 60.119 179.909 78.198 1.00 40.79 O
ATOM 24 OP2 C A1355 58.663 179.814 80.305 1.00 39.96 O
ATOM 25 O5' C A1355 58.493 181.717 78.689 1.00 39.92 O
TER
ATOM 1 O3' A B1352 51.951 178.352 87.200 1.00 41.27 O
ATOM 2 P C B1353 51.577 178.372 85.643 1.00 42.23 P
ATOM 3 OP1 C B1353 51.672 179.780 85.208 1.00 45.26 O
ATOM 4 OP2 C B1353 50.304 177.624 85.437 1.00 41.33 O
ATOM 5 O5' C B1353 52.777 177.588 84.955 1.00 41.20 O
ATOM 6 C5' C B1353 54.118 178.089 85.047 1.00 38.89 C
ATOM 7 C4' C B1353 55.099 176.948 85.097 1.00 38.23 C
ATOM 8 O4' C B1353 54.763 176.060 86.196 1.00 37.81 O
ATOM 9 C3' C B1353 55.103 176.034 83.889 1.00 36.78 C
ATOM 10 O3' C B1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 11 C2' C B1353 55.724 174.767 84.453 1.00 36.80 C
ATOM 12 O2' C B1353 57.124 174.876 84.599 1.00 35.42 O
ATOM 13 C1' C B1353 55.076 174.720 85.835 1.00 36.69 C
ATOM 14 N1 C B1353 53.835 173.920 85.863 1.00 37.42 N
ATOM 15 C2 C B1353 53.928 172.520 85.874 1.00 37.10 C
ATOM 16 O2 C B1353 55.047 171.988 85.806 1.00 38.70 O
ATOM 17 N3 C B1353 52.798 171.786 85.955 1.00 36.32 N
ATOM 18 C4 C B1353 51.615 172.392 86.016 1.00 35.73 C
ATOM 19 N4 C B1353 50.533 171.632 86.129 1.00 36.12 N
ATOM 20 C5 C B1353 51.488 173.807 85.973 1.00 36.67 C
ATOM 21 C6 C B1353 52.610 174.526 85.896 1.00 36.37 C
ATOM 22 P C B1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 23 OP1 C B1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 24 OP2 C B1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 25 O5' C B1354 56.012 177.005 80.399 1.00 36.50 O
TER
ATOM 2 P C A1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 3 OP1 C A1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 4 OP2 C A1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 5 O5' C A1354 56.012 177.005 80.399 1.00 36.50 O
ATOM 6 C5' C A1354 56.207 176.746 79.010 1.00 36.12 C
ATOM 7 C4' C A1354 55.779 177.937 78.199 1.00 36.88 C
ATOM 8 O4' C A1354 54.358 178.151 78.373 1.00 36.85 O
ATOM 9 C3' C A1354 56.393 179.268 78.590 1.00 37.55 C
ATOM 10 O3' C A1354 57.688 179.425 78.032 1.00 37.31 O
ATOM 11 C2' C A1354 55.396 180.251 78.000 1.00 38.55 C
ATOM 12 O2' C A1354 55.535 180.384 76.598 1.00 42.16 O
ATOM 13 C1' C A1354 54.078 179.536 78.290 1.00 37.45 C
ATOM 14 N1 C A1354 53.447 179.968 79.547 1.00 37.89 N
ATOM 15 C2 C A1354 52.848 181.231 79.593 1.00 38.85 C
ATOM 16 O2 C A1354 52.898 181.957 78.586 1.00 41.96 O
ATOM 17 N3 C A1354 52.235 181.628 80.728 1.00 37.30 N
ATOM 18 C4 C A1354 52.210 180.823 81.791 1.00 35.81 C
ATOM 19 N4 C A1354 51.576 181.251 82.883 1.00 34.27 N
ATOM 20 C5 C A1354 52.828 179.542 81.779 1.00 35.33 C
ATOM 21 C6 C A1354 53.430 179.158 80.648 1.00 36.53 C
ATOM 22 P C A1355 58.829 180.172 78.877 1.00 39.16 P
ATOM 23 OP1 C A1355 60.119 179.909 78.198 1.00 40.79 O
ATOM 24 OP2 C A1355 58.663 179.814 80.305 1.00 39.96 O
ATOM 25 O5' C A1355 58.493 181.717 78.689 1.00 39.92 O
TER
ATOM 1 O3' A B1352 51.951 178.352 87.200 1.00 41.27 O
ATOM 2 P C B1353 51.577 178.372 85.643 1.00 42.23 P
ATOM 3 OP1 C B1353 51.672 179.780 85.208 1.00 45.26 O
ATOM 4 OP2 C B1353 50.304 177.624 85.437 1.00 41.33 O
ATOM 5 O5' C B1353 52.777 177.588 84.955 1.00 41.20 O
ATOM 6 C5' C B1353 54.118 178.089 85.047 1.00 38.89 C
ATOM 7 C4' C B1353 55.099 176.948 85.097 1.00 38.23 C
ATOM 8 O4' C B1353 54.763 176.060 86.196 1.00 37.81 O
ATOM 9 C3' C B1353 55.103 176.034 83.889 1.00 36.78 C
ATOM 10 O3' C B1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 11 C2' C B1353 55.724 174.767 84.453 1.00 36.80 C
ATOM 12 O2' C B1353 57.124 174.876 84.599 1.00 35.42 O
ATOM 13 C1' C B1353 55.076 174.720 85.835 1.00 36.69 C
ATOM 14 N1 C B1353 53.835 173.920 85.863 1.00 37.42 N
ATOM 15 C2 C B1353 53.928 172.520 85.874 1.00 37.10 C
ATOM 16 O2 C B1353 55.047 171.988 85.806 1.00 38.70 O
ATOM 17 N3 C B1353 52.798 171.786 85.955 1.00 36.32 N
ATOM 18 C4 C B1353 51.615 172.392 86.016 1.00 35.73 C
ATOM 19 N4 C B1353 50.533 171.632 86.129 1.00 36.12 N
ATOM 20 C5 C B1353 51.488 173.807 85.973 1.00 36.67 C
ATOM 21 C6 C B1353 52.610 174.526 85.896 1.00 36.37 C
ATOM 22 P C B1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 23 OP1 C B1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 24 OP2 C B1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 25 O5' C B1354 56.012 177.005 80.399 1.00 36.50 O
TER
Atoms:
C2: (52.848,181.231,79.593)
OP1: (54.780,175.014,81.258)
OP2: (57.325,175.148,81.430)
C4: (52.210,180.823,81.791)
O5': (56.012,177.005,80.399)
C3': (56.393,179.268,78.590)
C1': (54.078,179.536,78.290)
O4': (54.358,178.151,78.373)
C5': (56.207,176.746,79.010)
P: (56.008,175.817,81.457)
O2: (52.898,181.957,78.586)
C4': (55.779,177.937,78.199)
C2': (55.396,180.251,78.000)
O2': (55.535,180.384,76.598)
N1: (53.447,179.968,79.547)
N3: (52.235,181.628,80.728)
N4: (51.576,181.251,82.883)
C6: (53.430,179.158,80.648)
C5: (52.828,179.542,81.779)
O3': (57.688,179.425,78.032)
OP1: (54.780,175.014,81.258)
OP2: (57.325,175.148,81.430)
C4: (52.210,180.823,81.791)
O5': (56.012,177.005,80.399)
C3': (56.393,179.268,78.590)
C1': (54.078,179.536,78.290)
O4': (54.358,178.151,78.373)
C5': (56.207,176.746,79.010)
P: (56.008,175.817,81.457)
O2: (52.898,181.957,78.586)
C4': (55.779,177.937,78.199)
C2': (55.396,180.251,78.000)
O2': (55.535,180.384,76.598)
N1: (53.447,179.968,79.547)
N3: (52.235,181.628,80.728)
N4: (51.576,181.251,82.883)
C6: (53.430,179.158,80.648)
C5: (52.828,179.542,81.779)
O3': (57.688,179.425,78.032)
C2: (53.928,172.520,85.874)
OP1: (51.672,179.780,85.208)
OP2: (50.304,177.624,85.437)
C4: (51.615,172.392,86.016)
O5': (52.777,177.588,84.955)
C3': (55.103,176.034,83.889)
C1': (55.076,174.720,85.835)
O4': (54.763,176.060,86.196)
C5': (54.118,178.089,85.047)
P: (51.577,178.372,85.643)
O2: (55.047,171.988,85.806)
C4': (55.099,176.948,85.097)
C2': (55.724,174.767,84.453)
O2': (57.124,174.876,84.599)
N1: (53.835,173.920,85.863)
N3: (52.798,171.786,85.955)
N4: (50.533,171.632,86.129)
C6: (52.610,174.526,85.896)
C5: (51.488,173.807,85.973)
O3': (55.892,176.581,82.859)
OP1: (51.672,179.780,85.208)
OP2: (50.304,177.624,85.437)
C4: (51.615,172.392,86.016)
O5': (52.777,177.588,84.955)
C3': (55.103,176.034,83.889)
C1': (55.076,174.720,85.835)
O4': (54.763,176.060,86.196)
C5': (54.118,178.089,85.047)
P: (51.577,178.372,85.643)
O2: (55.047,171.988,85.806)
C4': (55.099,176.948,85.097)
C2': (55.724,174.767,84.453)
O2': (57.124,174.876,84.599)
N1: (53.835,173.920,85.863)
N3: (52.798,171.786,85.955)
N4: (50.533,171.632,86.129)
C6: (52.610,174.526,85.896)
C5: (51.488,173.807,85.973)
O3': (55.892,176.581,82.859)
Image (generated by PyMOL):