Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0330:0329
Extra
PDB:
ATOM 1 O3' C A 329 12.550 139.387 29.234 1.00 47.60 O
ATOM 2 P C A 330 11.512 140.572 29.553 1.00 48.68 P
ATOM 3 OP1 C A 330 10.844 140.342 30.858 1.00 46.08 O
ATOM 4 OP2 C A 330 10.682 140.742 28.341 1.00 49.35 O
ATOM 5 O5' C A 330 12.461 141.840 29.676 1.00 47.21 O
ATOM 6 C5' C A 330 11.922 143.150 29.887 1.00 48.67 C
ATOM 7 C4' C A 330 12.867 143.964 30.737 1.00 50.39 C
ATOM 8 O4' C A 330 12.779 143.554 32.129 1.00 51.27 O
ATOM 9 C3' C A 330 14.338 143.792 30.405 1.00 49.37 C
ATOM 10 O3' C A 330 14.718 144.546 29.267 1.00 49.63 O
ATOM 11 C2' C A 330 15.000 144.260 31.689 1.00 49.82 C
ATOM 12 O2' C A 330 14.966 145.666 31.814 1.00 47.24 O
ATOM 13 C1' C A 330 14.059 143.658 32.735 1.00 51.68 C
ATOM 14 N1 C A 330 14.473 142.319 33.219 1.00 52.88 N
ATOM 15 C2 C A 330 15.374 142.232 34.302 1.00 52.82 C
ATOM 16 O2 C A 330 15.810 143.277 34.819 1.00 50.43 O
ATOM 17 N3 C A 330 15.746 141.010 34.753 1.00 52.37 N
ATOM 18 C4 C A 330 15.266 139.909 34.175 1.00 53.19 C
ATOM 19 N4 C A 330 15.654 138.730 34.662 1.00 54.02 N
ATOM 20 C5 C A 330 14.362 139.966 33.074 1.00 53.19 C
ATOM 21 C6 C A 330 13.994 141.178 32.635 1.00 52.62 C
ATOM 22 P C A 331 15.704 143.893 28.181 1.00 51.22 P
ATOM 23 OP1 C A 331 15.633 144.693 26.931 1.00 52.15 O
ATOM 24 OP2 C A 331 15.414 142.436 28.139 1.00 51.17 O
ATOM 25 O5' C A 331 17.153 144.079 28.815 1.00 50.22 O
TER
ATOM 1 O3' A B 328 15.697 134.722 31.658 1.00 46.62 O
ATOM 2 P C B 329 15.066 136.080 32.227 1.00 49.18 P
ATOM 3 OP1 C B 329 16.125 137.117 32.252 1.00 49.42 O
ATOM 4 OP2 C B 329 14.336 135.755 33.469 1.00 48.78 O
ATOM 5 O5' C B 329 13.996 136.494 31.123 1.00 51.99 O
ATOM 6 C5' C B 329 14.411 136.808 29.776 1.00 52.30 C
ATOM 7 C4' C B 329 13.208 137.071 28.901 1.00 52.90 C
ATOM 8 O4' C B 329 12.475 135.839 28.686 1.00 54.67 O
ATOM 9 C3' C B 329 12.170 138.035 29.455 1.00 52.45 C
ATOM 10 O3' C B 329 12.550 139.387 29.234 1.00 47.60 O
ATOM 11 C2' C B 329 10.923 137.645 28.673 1.00 53.94 C
ATOM 12 O2' C B 329 10.916 138.181 27.366 1.00 56.08 O
ATOM 13 C1' C B 329 11.090 136.128 28.578 1.00 54.73 C
ATOM 14 N1 C B 329 10.360 135.394 29.625 1.00 56.54 N
ATOM 15 C2 C B 329 8.971 135.297 29.527 1.00 57.21 C
ATOM 16 O2 C B 329 8.398 135.858 28.585 1.00 59.57 O
ATOM 17 N3 C B 329 8.288 134.601 30.461 1.00 57.21 N
ATOM 18 C4 C B 329 8.940 134.026 31.469 1.00 56.30 C
ATOM 19 N4 C B 329 8.228 133.347 32.365 1.00 56.92 N
ATOM 20 C5 C B 329 10.352 134.121 31.604 1.00 57.69 C
ATOM 21 C6 C B 329 11.018 134.809 30.670 1.00 57.22 C
ATOM 22 P C B 330 11.512 140.572 29.553 1.00 48.68 P
ATOM 23 OP1 C B 330 10.844 140.342 30.858 1.00 46.08 O
ATOM 24 OP2 C B 330 10.682 140.742 28.341 1.00 49.35 O
ATOM 25 O5' C B 330 12.461 141.840 29.676 1.00 47.21 O
TER
ATOM 2 P C A 330 11.512 140.572 29.553 1.00 48.68 P
ATOM 3 OP1 C A 330 10.844 140.342 30.858 1.00 46.08 O
ATOM 4 OP2 C A 330 10.682 140.742 28.341 1.00 49.35 O
ATOM 5 O5' C A 330 12.461 141.840 29.676 1.00 47.21 O
ATOM 6 C5' C A 330 11.922 143.150 29.887 1.00 48.67 C
ATOM 7 C4' C A 330 12.867 143.964 30.737 1.00 50.39 C
ATOM 8 O4' C A 330 12.779 143.554 32.129 1.00 51.27 O
ATOM 9 C3' C A 330 14.338 143.792 30.405 1.00 49.37 C
ATOM 10 O3' C A 330 14.718 144.546 29.267 1.00 49.63 O
ATOM 11 C2' C A 330 15.000 144.260 31.689 1.00 49.82 C
ATOM 12 O2' C A 330 14.966 145.666 31.814 1.00 47.24 O
ATOM 13 C1' C A 330 14.059 143.658 32.735 1.00 51.68 C
ATOM 14 N1 C A 330 14.473 142.319 33.219 1.00 52.88 N
ATOM 15 C2 C A 330 15.374 142.232 34.302 1.00 52.82 C
ATOM 16 O2 C A 330 15.810 143.277 34.819 1.00 50.43 O
ATOM 17 N3 C A 330 15.746 141.010 34.753 1.00 52.37 N
ATOM 18 C4 C A 330 15.266 139.909 34.175 1.00 53.19 C
ATOM 19 N4 C A 330 15.654 138.730 34.662 1.00 54.02 N
ATOM 20 C5 C A 330 14.362 139.966 33.074 1.00 53.19 C
ATOM 21 C6 C A 330 13.994 141.178 32.635 1.00 52.62 C
ATOM 22 P C A 331 15.704 143.893 28.181 1.00 51.22 P
ATOM 23 OP1 C A 331 15.633 144.693 26.931 1.00 52.15 O
ATOM 24 OP2 C A 331 15.414 142.436 28.139 1.00 51.17 O
ATOM 25 O5' C A 331 17.153 144.079 28.815 1.00 50.22 O
TER
ATOM 1 O3' A B 328 15.697 134.722 31.658 1.00 46.62 O
ATOM 2 P C B 329 15.066 136.080 32.227 1.00 49.18 P
ATOM 3 OP1 C B 329 16.125 137.117 32.252 1.00 49.42 O
ATOM 4 OP2 C B 329 14.336 135.755 33.469 1.00 48.78 O
ATOM 5 O5' C B 329 13.996 136.494 31.123 1.00 51.99 O
ATOM 6 C5' C B 329 14.411 136.808 29.776 1.00 52.30 C
ATOM 7 C4' C B 329 13.208 137.071 28.901 1.00 52.90 C
ATOM 8 O4' C B 329 12.475 135.839 28.686 1.00 54.67 O
ATOM 9 C3' C B 329 12.170 138.035 29.455 1.00 52.45 C
ATOM 10 O3' C B 329 12.550 139.387 29.234 1.00 47.60 O
ATOM 11 C2' C B 329 10.923 137.645 28.673 1.00 53.94 C
ATOM 12 O2' C B 329 10.916 138.181 27.366 1.00 56.08 O
ATOM 13 C1' C B 329 11.090 136.128 28.578 1.00 54.73 C
ATOM 14 N1 C B 329 10.360 135.394 29.625 1.00 56.54 N
ATOM 15 C2 C B 329 8.971 135.297 29.527 1.00 57.21 C
ATOM 16 O2 C B 329 8.398 135.858 28.585 1.00 59.57 O
ATOM 17 N3 C B 329 8.288 134.601 30.461 1.00 57.21 N
ATOM 18 C4 C B 329 8.940 134.026 31.469 1.00 56.30 C
ATOM 19 N4 C B 329 8.228 133.347 32.365 1.00 56.92 N
ATOM 20 C5 C B 329 10.352 134.121 31.604 1.00 57.69 C
ATOM 21 C6 C B 329 11.018 134.809 30.670 1.00 57.22 C
ATOM 22 P C B 330 11.512 140.572 29.553 1.00 48.68 P
ATOM 23 OP1 C B 330 10.844 140.342 30.858 1.00 46.08 O
ATOM 24 OP2 C B 330 10.682 140.742 28.341 1.00 49.35 O
ATOM 25 O5' C B 330 12.461 141.840 29.676 1.00 47.21 O
TER
Atoms:
C2: (15.374,142.232,34.302)
OP1: (10.844,140.342,30.858)
OP2: (10.682,140.742,28.341)
C4: (15.266,139.909,34.175)
O5': (12.461,141.840,29.676)
C3': (14.338,143.792,30.405)
C1': (14.059,143.658,32.735)
O4': (12.779,143.554,32.129)
C5': (11.922,143.150,29.887)
P: (11.512,140.572,29.553)
O2: (15.810,143.277,34.819)
C4': (12.867,143.964,30.737)
C2': (15.000,144.260,31.689)
O2': (14.966,145.666,31.814)
N1: (14.473,142.319,33.219)
N3: (15.746,141.010,34.753)
N4: (15.654,138.730,34.662)
C6: (13.994,141.178,32.635)
C5: (14.362,139.966,33.074)
O3': (14.718,144.546,29.267)
OP1: (10.844,140.342,30.858)
OP2: (10.682,140.742,28.341)
C4: (15.266,139.909,34.175)
O5': (12.461,141.840,29.676)
C3': (14.338,143.792,30.405)
C1': (14.059,143.658,32.735)
O4': (12.779,143.554,32.129)
C5': (11.922,143.150,29.887)
P: (11.512,140.572,29.553)
O2: (15.810,143.277,34.819)
C4': (12.867,143.964,30.737)
C2': (15.000,144.260,31.689)
O2': (14.966,145.666,31.814)
N1: (14.473,142.319,33.219)
N3: (15.746,141.010,34.753)
N4: (15.654,138.730,34.662)
C6: (13.994,141.178,32.635)
C5: (14.362,139.966,33.074)
O3': (14.718,144.546,29.267)
C2: (8.971,135.297,29.527)
OP1: (16.125,137.117,32.252)
OP2: (14.336,135.755,33.469)
C4: (8.940,134.026,31.469)
O5': (13.996,136.494,31.123)
C3': (12.170,138.035,29.455)
C1': (11.090,136.128,28.578)
O4': (12.475,135.839,28.686)
C5': (14.411,136.808,29.776)
P: (15.066,136.080,32.227)
O2: (8.398,135.858,28.585)
C4': (13.208,137.071,28.901)
C2': (10.923,137.645,28.673)
O2': (10.916,138.181,27.366)
N1: (10.360,135.394,29.625)
N3: (8.288,134.601,30.461)
N4: (8.228,133.347,32.365)
C6: (11.018,134.809,30.670)
C5: (10.352,134.121,31.604)
O3': (12.550,139.387,29.234)
OP1: (16.125,137.117,32.252)
OP2: (14.336,135.755,33.469)
C4: (8.940,134.026,31.469)
O5': (13.996,136.494,31.123)
C3': (12.170,138.035,29.455)
C1': (11.090,136.128,28.578)
O4': (12.475,135.839,28.686)
C5': (14.411,136.808,29.776)
P: (15.066,136.080,32.227)
O2: (8.398,135.858,28.585)
C4': (13.208,137.071,28.901)
C2': (10.923,137.645,28.673)
O2': (10.916,138.181,27.366)
N1: (10.360,135.394,29.625)
N3: (8.288,134.601,30.461)
N4: (8.228,133.347,32.365)
C6: (11.018,134.809,30.670)
C5: (10.352,134.121,31.604)
O3': (12.550,139.387,29.234)
Image (generated by PyMOL):