Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01354:01353
Extra
PDB:
ATOM 1 O3' C A1353 56.022 176.887 83.046 1.00 41.42 O
ATOM 2 P C A1354 56.137 176.103 81.658 1.00 42.98 P
ATOM 3 OP1 C A1354 54.888 175.336 81.452 1.00 44.31 O
ATOM 4 OP2 C A1354 57.432 175.388 81.666 1.00 43.47 O
ATOM 5 O5' C A1354 56.189 177.276 80.587 1.00 42.62 O
ATOM 6 C5' C A1354 56.336 176.991 79.193 1.00 42.98 C
ATOM 7 C4' C A1354 55.914 178.182 78.379 1.00 43.76 C
ATOM 8 O4' C A1354 54.489 178.378 78.525 1.00 43.65 O
ATOM 9 C3' C A1354 56.512 179.508 78.806 1.00 44.41 C
ATOM 10 O3' C A1354 57.823 179.682 78.277 1.00 46.17 O
ATOM 11 C2' C A1354 55.506 180.504 78.244 1.00 44.99 C
ATOM 12 O2' C A1354 55.641 180.742 76.857 1.00 48.24 O
ATOM 13 C1' C A1354 54.192 179.760 78.475 1.00 43.57 C
ATOM 14 N1 C A1354 53.517 180.151 79.723 1.00 43.27 N
ATOM 15 C2 C A1354 52.942 181.429 79.797 1.00 44.69 C
ATOM 16 O2 C A1354 53.025 182.190 78.809 1.00 44.99 O
ATOM 17 N3 C A1354 52.313 181.802 80.937 1.00 43.23 N
ATOM 18 C4 C A1354 52.242 180.958 81.965 1.00 41.16 C
ATOM 19 N4 C A1354 51.604 181.367 83.056 1.00 40.11 N
ATOM 20 C5 C A1354 52.819 179.657 81.916 1.00 40.74 C
ATOM 21 C6 C A1354 53.441 179.299 80.789 1.00 41.01 C
ATOM 22 P C A1355 58.937 180.447 79.148 1.00 47.34 P
ATOM 23 OP1 C A1355 60.257 180.194 78.515 1.00 47.93 O
ATOM 24 OP2 C A1355 58.728 180.103 80.581 1.00 47.56 O
ATOM 25 O5' C A1355 58.593 181.983 78.936 1.00 45.80 O
TER
ATOM 1 O3' A B1352 52.241 178.494 87.510 1.00 48.27 O
ATOM 2 P C B1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 3 OP1 C B1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 4 OP2 C B1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 5 O5' C B1353 52.958 177.909 85.183 1.00 48.07 O
ATOM 6 C5' C B1353 54.311 178.384 85.298 1.00 44.96 C
ATOM 7 C4' C B1353 55.279 177.227 85.311 1.00 42.84 C
ATOM 8 O4' C B1353 54.963 176.324 86.400 1.00 41.75 O
ATOM 9 C3' C B1353 55.252 176.336 84.089 1.00 41.81 C
ATOM 10 O3' C B1353 56.022 176.887 83.046 1.00 41.42 O
ATOM 11 C2' C B1353 55.867 175.048 84.613 1.00 42.62 C
ATOM 12 O2' C B1353 57.282 175.116 84.693 1.00 43.61 O
ATOM 13 C1' C B1353 55.269 174.990 86.018 1.00 41.56 C
ATOM 14 N1 C B1353 54.041 174.177 86.109 1.00 41.19 N
ATOM 15 C2 C B1353 54.148 172.783 86.128 1.00 42.53 C
ATOM 16 O2 C B1353 55.265 172.265 86.037 1.00 45.38 O
ATOM 17 N3 C B1353 53.031 172.034 86.245 1.00 43.10 N
ATOM 18 C4 C B1353 51.843 172.626 86.340 1.00 42.65 C
ATOM 19 N4 C B1353 50.771 171.856 86.486 1.00 41.36 N
ATOM 20 C5 C B1353 51.701 174.040 86.300 1.00 43.89 C
ATOM 21 C6 C B1353 52.814 174.769 86.185 1.00 42.81 C
ATOM 22 P C B1354 56.137 176.103 81.658 1.00 42.98 P
ATOM 23 OP1 C B1354 54.888 175.336 81.452 1.00 44.31 O
ATOM 24 OP2 C B1354 57.432 175.388 81.666 1.00 43.47 O
ATOM 25 O5' C B1354 56.189 177.276 80.587 1.00 42.62 O
TER
ATOM 2 P C A1354 56.137 176.103 81.658 1.00 42.98 P
ATOM 3 OP1 C A1354 54.888 175.336 81.452 1.00 44.31 O
ATOM 4 OP2 C A1354 57.432 175.388 81.666 1.00 43.47 O
ATOM 5 O5' C A1354 56.189 177.276 80.587 1.00 42.62 O
ATOM 6 C5' C A1354 56.336 176.991 79.193 1.00 42.98 C
ATOM 7 C4' C A1354 55.914 178.182 78.379 1.00 43.76 C
ATOM 8 O4' C A1354 54.489 178.378 78.525 1.00 43.65 O
ATOM 9 C3' C A1354 56.512 179.508 78.806 1.00 44.41 C
ATOM 10 O3' C A1354 57.823 179.682 78.277 1.00 46.17 O
ATOM 11 C2' C A1354 55.506 180.504 78.244 1.00 44.99 C
ATOM 12 O2' C A1354 55.641 180.742 76.857 1.00 48.24 O
ATOM 13 C1' C A1354 54.192 179.760 78.475 1.00 43.57 C
ATOM 14 N1 C A1354 53.517 180.151 79.723 1.00 43.27 N
ATOM 15 C2 C A1354 52.942 181.429 79.797 1.00 44.69 C
ATOM 16 O2 C A1354 53.025 182.190 78.809 1.00 44.99 O
ATOM 17 N3 C A1354 52.313 181.802 80.937 1.00 43.23 N
ATOM 18 C4 C A1354 52.242 180.958 81.965 1.00 41.16 C
ATOM 19 N4 C A1354 51.604 181.367 83.056 1.00 40.11 N
ATOM 20 C5 C A1354 52.819 179.657 81.916 1.00 40.74 C
ATOM 21 C6 C A1354 53.441 179.299 80.789 1.00 41.01 C
ATOM 22 P C A1355 58.937 180.447 79.148 1.00 47.34 P
ATOM 23 OP1 C A1355 60.257 180.194 78.515 1.00 47.93 O
ATOM 24 OP2 C A1355 58.728 180.103 80.581 1.00 47.56 O
ATOM 25 O5' C A1355 58.593 181.983 78.936 1.00 45.80 O
TER
ATOM 1 O3' A B1352 52.241 178.494 87.510 1.00 48.27 O
ATOM 2 P C B1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 3 OP1 C B1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 4 OP2 C B1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 5 O5' C B1353 52.958 177.909 85.183 1.00 48.07 O
ATOM 6 C5' C B1353 54.311 178.384 85.298 1.00 44.96 C
ATOM 7 C4' C B1353 55.279 177.227 85.311 1.00 42.84 C
ATOM 8 O4' C B1353 54.963 176.324 86.400 1.00 41.75 O
ATOM 9 C3' C B1353 55.252 176.336 84.089 1.00 41.81 C
ATOM 10 O3' C B1353 56.022 176.887 83.046 1.00 41.42 O
ATOM 11 C2' C B1353 55.867 175.048 84.613 1.00 42.62 C
ATOM 12 O2' C B1353 57.282 175.116 84.693 1.00 43.61 O
ATOM 13 C1' C B1353 55.269 174.990 86.018 1.00 41.56 C
ATOM 14 N1 C B1353 54.041 174.177 86.109 1.00 41.19 N
ATOM 15 C2 C B1353 54.148 172.783 86.128 1.00 42.53 C
ATOM 16 O2 C B1353 55.265 172.265 86.037 1.00 45.38 O
ATOM 17 N3 C B1353 53.031 172.034 86.245 1.00 43.10 N
ATOM 18 C4 C B1353 51.843 172.626 86.340 1.00 42.65 C
ATOM 19 N4 C B1353 50.771 171.856 86.486 1.00 41.36 N
ATOM 20 C5 C B1353 51.701 174.040 86.300 1.00 43.89 C
ATOM 21 C6 C B1353 52.814 174.769 86.185 1.00 42.81 C
ATOM 22 P C B1354 56.137 176.103 81.658 1.00 42.98 P
ATOM 23 OP1 C B1354 54.888 175.336 81.452 1.00 44.31 O
ATOM 24 OP2 C B1354 57.432 175.388 81.666 1.00 43.47 O
ATOM 25 O5' C B1354 56.189 177.276 80.587 1.00 42.62 O
TER
Atoms:
C2: (52.942,181.429,79.797)
OP1: (54.888,175.336,81.452)
OP2: (57.432,175.388,81.666)
C4: (52.242,180.958,81.965)
O5': (56.189,177.276,80.587)
C3': (56.512,179.508,78.806)
C1': (54.192,179.760,78.475)
O4': (54.489,178.378,78.525)
C5': (56.336,176.991,79.193)
P: (56.137,176.103,81.658)
O2: (53.025,182.190,78.809)
C4': (55.914,178.182,78.379)
C2': (55.506,180.504,78.244)
O2': (55.641,180.742,76.857)
N1: (53.517,180.151,79.723)
N3: (52.313,181.802,80.937)
N4: (51.604,181.367,83.056)
C6: (53.441,179.299,80.789)
C5: (52.819,179.657,81.916)
O3': (57.823,179.682,78.277)
OP1: (54.888,175.336,81.452)
OP2: (57.432,175.388,81.666)
C4: (52.242,180.958,81.965)
O5': (56.189,177.276,80.587)
C3': (56.512,179.508,78.806)
C1': (54.192,179.760,78.475)
O4': (54.489,178.378,78.525)
C5': (56.336,176.991,79.193)
P: (56.137,176.103,81.658)
O2: (53.025,182.190,78.809)
C4': (55.914,178.182,78.379)
C2': (55.506,180.504,78.244)
O2': (55.641,180.742,76.857)
N1: (53.517,180.151,79.723)
N3: (52.313,181.802,80.937)
N4: (51.604,181.367,83.056)
C6: (53.441,179.299,80.789)
C5: (52.819,179.657,81.916)
O3': (57.823,179.682,78.277)
C2: (54.148,172.783,86.128)
OP1: (51.812,180.064,85.653)
OP2: (50.518,177.856,85.817)
C4: (51.843,172.626,86.340)
O5': (52.958,177.909,85.183)
C3': (55.252,176.336,84.089)
C1': (55.269,174.990,86.018)
O4': (54.963,176.324,86.400)
C5': (54.311,178.384,85.298)
P: (51.783,178.624,85.985)
O2: (55.265,172.265,86.037)
C4': (55.279,177.227,85.311)
C2': (55.867,175.048,84.613)
O2': (57.282,175.116,84.693)
N1: (54.041,174.177,86.109)
N3: (53.031,172.034,86.245)
N4: (50.771,171.856,86.486)
C6: (52.814,174.769,86.185)
C5: (51.701,174.040,86.300)
O3': (56.022,176.887,83.046)
OP1: (51.812,180.064,85.653)
OP2: (50.518,177.856,85.817)
C4: (51.843,172.626,86.340)
O5': (52.958,177.909,85.183)
C3': (55.252,176.336,84.089)
C1': (55.269,174.990,86.018)
O4': (54.963,176.324,86.400)
C5': (54.311,178.384,85.298)
P: (51.783,178.624,85.985)
O2: (55.265,172.265,86.037)
C4': (55.279,177.227,85.311)
C2': (55.867,175.048,84.613)
O2': (57.282,175.116,84.693)
N1: (54.041,174.177,86.109)
N3: (53.031,172.034,86.245)
N4: (50.771,171.856,86.486)
C6: (52.814,174.769,86.185)
C5: (51.701,174.040,86.300)
O3': (56.022,176.887,83.046)
Image (generated by PyMOL):