Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:99:98
Extra
PDB:
ATOM 1 O3' C A 8 52.007 42.626 98.876 1.00 50.89 O
ATOM 2 P C A 9 53.368 43.478 98.970 1.00 53.02 P
ATOM 3 OP1 C A 9 52.994 44.754 99.616 1.00 54.61 O
ATOM 4 OP2 C A 9 54.024 43.493 97.641 1.00 53.14 O
ATOM 5 O5' C A 9 54.325 42.680 99.964 1.00 50.78 O
ATOM 6 C5' C A 9 53.980 42.505 101.343 1.00 50.85 C
ATOM 7 C4' C A 9 54.987 41.609 102.033 1.00 51.80 C
ATOM 8 O4' C A 9 55.055 40.336 101.329 1.00 51.06 O
ATOM 9 C3' C A 9 56.423 42.125 102.127 1.00 51.38 C
ATOM 10 O3' C A 9 57.013 41.657 103.334 1.00 52.37 O
ATOM 11 C2' C A 9 57.106 41.424 100.961 1.00 51.50 C
ATOM 12 O2' C A 9 58.485 41.228 101.198 1.00 52.80 O
ATOM 13 C1' C A 9 56.388 40.075 100.949 1.00 51.37 C
ATOM 14 N1 C A 9 56.383 39.455 99.616 1.00 51.39 N
ATOM 15 C2 C A 9 57.128 38.285 99.400 1.00 51.54 C
ATOM 16 O2 C A 9 57.714 37.749 100.356 1.00 51.93 O
ATOM 17 N3 C A 9 57.180 37.764 98.156 1.00 50.29 N
ATOM 18 C4 C A 9 56.514 38.347 97.159 1.00 50.05 C
ATOM 19 N4 C A 9 56.613 37.814 95.945 1.00 51.22 N
ATOM 20 C5 C A 9 55.719 39.507 97.360 1.00 50.90 C
ATOM 21 C6 C A 9 55.681 40.023 98.590 1.00 51.30 C
ATOM 22 P A A 10 56.994 42.580 104.643 1.00 52.46 P
ATOM 23 OP1 A A 10 55.629 43.129 104.820 1.00 53.18 O
ATOM 24 OP2 A A 10 58.147 43.502 104.564 1.00 54.22 O
ATOM 25 O5' A A 10 57.263 41.553 105.827 1.00 53.22 O
TER
ATOM 1 O3' G B 7 52.292 38.686 93.866 1.00 52.85 O
ATOM 2 P C B 8 53.247 39.835 94.459 1.00 52.04 P
ATOM 3 OP1 C B 8 52.951 41.048 93.662 1.00 50.93 O
ATOM 4 OP2 C B 8 54.634 39.325 94.522 1.00 52.23 O
ATOM 5 O5' C B 8 52.718 40.053 95.948 1.00 50.69 O
ATOM 6 C5' C B 8 51.544 40.848 96.194 1.00 50.35 C
ATOM 7 C4' C B 8 51.101 40.729 97.635 1.00 51.53 C
ATOM 8 O4' C B 8 50.906 39.329 97.972 1.00 51.78 O
ATOM 9 C3' C B 8 52.063 41.215 98.705 1.00 52.56 C
ATOM 10 O3' C B 8 52.007 42.626 98.876 1.00 50.89 O
ATOM 11 C2' C B 8 51.539 40.498 99.945 1.00 52.97 C
ATOM 12 O2' C B 8 50.416 41.120 100.528 1.00 56.09 O
ATOM 13 C1' C B 8 51.109 39.150 99.363 1.00 51.31 C
ATOM 14 N1 C B 8 52.117 38.101 99.578 1.00 51.80 N
ATOM 15 C2 C B 8 52.123 37.422 100.810 1.00 52.66 C
ATOM 16 O2 C B 8 51.270 37.714 101.661 1.00 53.44 O
ATOM 17 N3 C B 8 53.054 36.471 101.037 1.00 50.68 N
ATOM 18 C4 C B 8 53.950 36.184 100.094 1.00 51.33 C
ATOM 19 N4 C B 8 54.851 35.248 100.362 1.00 53.49 N
ATOM 20 C5 C B 8 53.962 36.849 98.831 1.00 51.38 C
ATOM 21 C6 C B 8 53.038 37.791 98.617 1.00 50.99 C
ATOM 22 P C B 9 53.368 43.478 98.970 1.00 53.02 P
ATOM 23 OP1 C B 9 52.994 44.754 99.616 1.00 54.61 O
ATOM 24 OP2 C B 9 54.024 43.493 97.641 1.00 53.14 O
ATOM 25 O5' C B 9 54.325 42.680 99.964 1.00 50.78 O
TER
ATOM 2 P C A 9 53.368 43.478 98.970 1.00 53.02 P
ATOM 3 OP1 C A 9 52.994 44.754 99.616 1.00 54.61 O
ATOM 4 OP2 C A 9 54.024 43.493 97.641 1.00 53.14 O
ATOM 5 O5' C A 9 54.325 42.680 99.964 1.00 50.78 O
ATOM 6 C5' C A 9 53.980 42.505 101.343 1.00 50.85 C
ATOM 7 C4' C A 9 54.987 41.609 102.033 1.00 51.80 C
ATOM 8 O4' C A 9 55.055 40.336 101.329 1.00 51.06 O
ATOM 9 C3' C A 9 56.423 42.125 102.127 1.00 51.38 C
ATOM 10 O3' C A 9 57.013 41.657 103.334 1.00 52.37 O
ATOM 11 C2' C A 9 57.106 41.424 100.961 1.00 51.50 C
ATOM 12 O2' C A 9 58.485 41.228 101.198 1.00 52.80 O
ATOM 13 C1' C A 9 56.388 40.075 100.949 1.00 51.37 C
ATOM 14 N1 C A 9 56.383 39.455 99.616 1.00 51.39 N
ATOM 15 C2 C A 9 57.128 38.285 99.400 1.00 51.54 C
ATOM 16 O2 C A 9 57.714 37.749 100.356 1.00 51.93 O
ATOM 17 N3 C A 9 57.180 37.764 98.156 1.00 50.29 N
ATOM 18 C4 C A 9 56.514 38.347 97.159 1.00 50.05 C
ATOM 19 N4 C A 9 56.613 37.814 95.945 1.00 51.22 N
ATOM 20 C5 C A 9 55.719 39.507 97.360 1.00 50.90 C
ATOM 21 C6 C A 9 55.681 40.023 98.590 1.00 51.30 C
ATOM 22 P A A 10 56.994 42.580 104.643 1.00 52.46 P
ATOM 23 OP1 A A 10 55.629 43.129 104.820 1.00 53.18 O
ATOM 24 OP2 A A 10 58.147 43.502 104.564 1.00 54.22 O
ATOM 25 O5' A A 10 57.263 41.553 105.827 1.00 53.22 O
TER
ATOM 1 O3' G B 7 52.292 38.686 93.866 1.00 52.85 O
ATOM 2 P C B 8 53.247 39.835 94.459 1.00 52.04 P
ATOM 3 OP1 C B 8 52.951 41.048 93.662 1.00 50.93 O
ATOM 4 OP2 C B 8 54.634 39.325 94.522 1.00 52.23 O
ATOM 5 O5' C B 8 52.718 40.053 95.948 1.00 50.69 O
ATOM 6 C5' C B 8 51.544 40.848 96.194 1.00 50.35 C
ATOM 7 C4' C B 8 51.101 40.729 97.635 1.00 51.53 C
ATOM 8 O4' C B 8 50.906 39.329 97.972 1.00 51.78 O
ATOM 9 C3' C B 8 52.063 41.215 98.705 1.00 52.56 C
ATOM 10 O3' C B 8 52.007 42.626 98.876 1.00 50.89 O
ATOM 11 C2' C B 8 51.539 40.498 99.945 1.00 52.97 C
ATOM 12 O2' C B 8 50.416 41.120 100.528 1.00 56.09 O
ATOM 13 C1' C B 8 51.109 39.150 99.363 1.00 51.31 C
ATOM 14 N1 C B 8 52.117 38.101 99.578 1.00 51.80 N
ATOM 15 C2 C B 8 52.123 37.422 100.810 1.00 52.66 C
ATOM 16 O2 C B 8 51.270 37.714 101.661 1.00 53.44 O
ATOM 17 N3 C B 8 53.054 36.471 101.037 1.00 50.68 N
ATOM 18 C4 C B 8 53.950 36.184 100.094 1.00 51.33 C
ATOM 19 N4 C B 8 54.851 35.248 100.362 1.00 53.49 N
ATOM 20 C5 C B 8 53.962 36.849 98.831 1.00 51.38 C
ATOM 21 C6 C B 8 53.038 37.791 98.617 1.00 50.99 C
ATOM 22 P C B 9 53.368 43.478 98.970 1.00 53.02 P
ATOM 23 OP1 C B 9 52.994 44.754 99.616 1.00 54.61 O
ATOM 24 OP2 C B 9 54.024 43.493 97.641 1.00 53.14 O
ATOM 25 O5' C B 9 54.325 42.680 99.964 1.00 50.78 O
TER
Atoms:
C2: (57.128,38.285,99.400)
OP1: (52.994,44.754,99.616)
OP2: (54.024,43.493,97.641)
C4: (56.514,38.347,97.159)
O5': (54.325,42.680,99.964)
C3': (56.423,42.125,102.127)
C1': (56.388,40.075,100.949)
O4': (55.055,40.336,101.329)
C5': (53.980,42.505,101.343)
P: (53.368,43.478,98.970)
O2: (57.714,37.749,100.356)
C4': (54.987,41.609,102.033)
C2': (57.106,41.424,100.961)
O2': (58.485,41.228,101.198)
N1: (56.383,39.455,99.616)
N3: (57.180,37.764,98.156)
N4: (56.613,37.814,95.945)
C6: (55.681,40.023,98.590)
C5: (55.719,39.507,97.360)
O3': (57.013,41.657,103.334)
OP1: (52.994,44.754,99.616)
OP2: (54.024,43.493,97.641)
C4: (56.514,38.347,97.159)
O5': (54.325,42.680,99.964)
C3': (56.423,42.125,102.127)
C1': (56.388,40.075,100.949)
O4': (55.055,40.336,101.329)
C5': (53.980,42.505,101.343)
P: (53.368,43.478,98.970)
O2: (57.714,37.749,100.356)
C4': (54.987,41.609,102.033)
C2': (57.106,41.424,100.961)
O2': (58.485,41.228,101.198)
N1: (56.383,39.455,99.616)
N3: (57.180,37.764,98.156)
N4: (56.613,37.814,95.945)
C6: (55.681,40.023,98.590)
C5: (55.719,39.507,97.360)
O3': (57.013,41.657,103.334)
C2: (52.123,37.422,100.810)
OP1: (52.951,41.048,93.662)
OP2: (54.634,39.325,94.522)
C4: (53.950,36.184,100.094)
O5': (52.718,40.053,95.948)
C3': (52.063,41.215,98.705)
C1': (51.109,39.150,99.363)
O4': (50.906,39.329,97.972)
C5': (51.544,40.848,96.194)
P: (53.247,39.835,94.459)
O2: (51.270,37.714,101.661)
C4': (51.101,40.729,97.635)
C2': (51.539,40.498,99.945)
O2': (50.416,41.120,100.528)
N1: (52.117,38.101,99.578)
N3: (53.054,36.471,101.037)
N4: (54.851,35.248,100.362)
C6: (53.038,37.791,98.617)
C5: (53.962,36.849,98.831)
O3': (52.007,42.626,98.876)
OP1: (52.951,41.048,93.662)
OP2: (54.634,39.325,94.522)
C4: (53.950,36.184,100.094)
O5': (52.718,40.053,95.948)
C3': (52.063,41.215,98.705)
C1': (51.109,39.150,99.363)
O4': (50.906,39.329,97.972)
C5': (51.544,40.848,96.194)
P: (53.247,39.835,94.459)
O2: (51.270,37.714,101.661)
C4': (51.101,40.729,97.635)
C2': (51.539,40.498,99.945)
O2': (50.416,41.120,100.528)
N1: (52.117,38.101,99.578)
N3: (53.054,36.471,101.037)
N4: (54.851,35.248,100.362)
C6: (53.038,37.791,98.617)
C5: (53.962,36.849,98.831)
O3': (52.007,42.626,98.876)
Image (generated by PyMOL):