Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01354:01353
Extra
PDB:
ATOM 1 O3' C A1353 55.904 176.622 82.827 1.00 41.02 O
ATOM 2 P C A1354 56.053 175.852 81.436 1.00 41.22 P
ATOM 3 OP1 C A1354 54.889 174.958 81.270 1.00 41.09 O
ATOM 4 OP2 C A1354 57.418 175.283 81.412 1.00 42.34 O
ATOM 5 O5' C A1354 55.965 177.014 80.353 1.00 40.03 O
ATOM 6 C5' C A1354 56.149 176.731 78.965 1.00 39.91 C
ATOM 7 C4' C A1354 55.766 177.928 78.132 1.00 41.42 C
ATOM 8 O4' C A1354 54.350 178.177 78.272 1.00 41.61 O
ATOM 9 C3' C A1354 56.407 179.255 78.497 1.00 41.50 C
ATOM 10 O3' C A1354 57.708 179.391 77.943 1.00 42.77 O
ATOM 11 C2' C A1354 55.432 180.246 77.880 1.00 43.01 C
ATOM 12 O2' C A1354 55.554 180.360 76.474 1.00 44.86 O
ATOM 13 C1' C A1354 54.102 179.568 78.186 1.00 41.56 C
ATOM 14 N1 C A1354 53.506 180.020 79.454 1.00 41.38 N
ATOM 15 C2 C A1354 52.894 181.276 79.494 1.00 41.71 C
ATOM 16 O2 C A1354 52.940 182.002 78.482 1.00 42.26 O
ATOM 17 N3 C A1354 52.272 181.669 80.631 1.00 40.88 N
ATOM 18 C4 C A1354 52.262 180.868 81.697 1.00 39.38 C
ATOM 19 N4 C A1354 51.600 181.274 82.775 1.00 39.00 N
ATOM 20 C5 C A1354 52.918 179.607 81.697 1.00 39.54 C
ATOM 21 C6 C A1354 53.523 179.226 80.568 1.00 40.33 C
ATOM 22 P C A1355 58.825 180.223 78.739 1.00 44.52 P
ATOM 23 OP1 C A1355 60.106 180.067 77.998 1.00 45.47 O
ATOM 24 OP2 C A1355 58.755 179.849 80.180 1.00 44.14 O
ATOM 25 O5' C A1355 58.369 181.739 78.574 1.00 44.80 O
TER
ATOM 1 O3' A B1352 51.947 178.401 87.174 1.00 47.33 O
ATOM 2 P C B1353 51.615 178.383 85.609 1.00 49.82 P
ATOM 3 OP1 C B1353 51.734 179.777 85.123 1.00 49.70 O
ATOM 4 OP2 C B1353 50.338 177.631 85.404 1.00 46.29 O
ATOM 5 O5' C B1353 52.828 177.562 84.989 1.00 46.51 O
ATOM 6 C5' C B1353 54.162 178.069 85.092 1.00 44.68 C
ATOM 7 C4' C B1353 55.155 176.939 85.090 1.00 43.61 C
ATOM 8 O4' C B1353 54.865 176.036 86.185 1.00 44.49 O
ATOM 9 C3' C B1353 55.150 176.043 83.869 1.00 41.41 C
ATOM 10 O3' C B1353 55.904 176.622 82.827 1.00 41.02 O
ATOM 11 C2' C B1353 55.804 174.780 84.405 1.00 42.86 C
ATOM 12 O2' C B1353 57.212 174.899 84.509 1.00 41.37 O
ATOM 13 C1' C B1353 55.190 174.707 85.804 1.00 43.26 C
ATOM 14 N1 C B1353 53.957 173.897 85.855 1.00 42.79 N
ATOM 15 C2 C B1353 54.053 172.511 85.738 1.00 41.88 C
ATOM 16 O2 C B1353 55.169 171.997 85.578 1.00 44.21 O
ATOM 17 N3 C B1353 52.930 171.766 85.797 1.00 40.82 N
ATOM 18 C4 C B1353 51.749 172.355 85.963 1.00 40.72 C
ATOM 19 N4 C B1353 50.673 171.586 86.029 1.00 42.06 N
ATOM 20 C5 C B1353 51.620 173.763 86.074 1.00 42.02 C
ATOM 21 C6 C B1353 52.736 174.489 86.017 1.00 42.79 C
ATOM 22 P C B1354 56.053 175.852 81.436 1.00 41.22 P
ATOM 23 OP1 C B1354 54.889 174.958 81.270 1.00 41.09 O
ATOM 24 OP2 C B1354 57.418 175.283 81.412 1.00 42.34 O
ATOM 25 O5' C B1354 55.965 177.014 80.353 1.00 40.03 O
TER
ATOM 2 P C A1354 56.053 175.852 81.436 1.00 41.22 P
ATOM 3 OP1 C A1354 54.889 174.958 81.270 1.00 41.09 O
ATOM 4 OP2 C A1354 57.418 175.283 81.412 1.00 42.34 O
ATOM 5 O5' C A1354 55.965 177.014 80.353 1.00 40.03 O
ATOM 6 C5' C A1354 56.149 176.731 78.965 1.00 39.91 C
ATOM 7 C4' C A1354 55.766 177.928 78.132 1.00 41.42 C
ATOM 8 O4' C A1354 54.350 178.177 78.272 1.00 41.61 O
ATOM 9 C3' C A1354 56.407 179.255 78.497 1.00 41.50 C
ATOM 10 O3' C A1354 57.708 179.391 77.943 1.00 42.77 O
ATOM 11 C2' C A1354 55.432 180.246 77.880 1.00 43.01 C
ATOM 12 O2' C A1354 55.554 180.360 76.474 1.00 44.86 O
ATOM 13 C1' C A1354 54.102 179.568 78.186 1.00 41.56 C
ATOM 14 N1 C A1354 53.506 180.020 79.454 1.00 41.38 N
ATOM 15 C2 C A1354 52.894 181.276 79.494 1.00 41.71 C
ATOM 16 O2 C A1354 52.940 182.002 78.482 1.00 42.26 O
ATOM 17 N3 C A1354 52.272 181.669 80.631 1.00 40.88 N
ATOM 18 C4 C A1354 52.262 180.868 81.697 1.00 39.38 C
ATOM 19 N4 C A1354 51.600 181.274 82.775 1.00 39.00 N
ATOM 20 C5 C A1354 52.918 179.607 81.697 1.00 39.54 C
ATOM 21 C6 C A1354 53.523 179.226 80.568 1.00 40.33 C
ATOM 22 P C A1355 58.825 180.223 78.739 1.00 44.52 P
ATOM 23 OP1 C A1355 60.106 180.067 77.998 1.00 45.47 O
ATOM 24 OP2 C A1355 58.755 179.849 80.180 1.00 44.14 O
ATOM 25 O5' C A1355 58.369 181.739 78.574 1.00 44.80 O
TER
ATOM 1 O3' A B1352 51.947 178.401 87.174 1.00 47.33 O
ATOM 2 P C B1353 51.615 178.383 85.609 1.00 49.82 P
ATOM 3 OP1 C B1353 51.734 179.777 85.123 1.00 49.70 O
ATOM 4 OP2 C B1353 50.338 177.631 85.404 1.00 46.29 O
ATOM 5 O5' C B1353 52.828 177.562 84.989 1.00 46.51 O
ATOM 6 C5' C B1353 54.162 178.069 85.092 1.00 44.68 C
ATOM 7 C4' C B1353 55.155 176.939 85.090 1.00 43.61 C
ATOM 8 O4' C B1353 54.865 176.036 86.185 1.00 44.49 O
ATOM 9 C3' C B1353 55.150 176.043 83.869 1.00 41.41 C
ATOM 10 O3' C B1353 55.904 176.622 82.827 1.00 41.02 O
ATOM 11 C2' C B1353 55.804 174.780 84.405 1.00 42.86 C
ATOM 12 O2' C B1353 57.212 174.899 84.509 1.00 41.37 O
ATOM 13 C1' C B1353 55.190 174.707 85.804 1.00 43.26 C
ATOM 14 N1 C B1353 53.957 173.897 85.855 1.00 42.79 N
ATOM 15 C2 C B1353 54.053 172.511 85.738 1.00 41.88 C
ATOM 16 O2 C B1353 55.169 171.997 85.578 1.00 44.21 O
ATOM 17 N3 C B1353 52.930 171.766 85.797 1.00 40.82 N
ATOM 18 C4 C B1353 51.749 172.355 85.963 1.00 40.72 C
ATOM 19 N4 C B1353 50.673 171.586 86.029 1.00 42.06 N
ATOM 20 C5 C B1353 51.620 173.763 86.074 1.00 42.02 C
ATOM 21 C6 C B1353 52.736 174.489 86.017 1.00 42.79 C
ATOM 22 P C B1354 56.053 175.852 81.436 1.00 41.22 P
ATOM 23 OP1 C B1354 54.889 174.958 81.270 1.00 41.09 O
ATOM 24 OP2 C B1354 57.418 175.283 81.412 1.00 42.34 O
ATOM 25 O5' C B1354 55.965 177.014 80.353 1.00 40.03 O
TER
Atoms:
C2: (52.894,181.276,79.494)
OP1: (54.889,174.958,81.270)
OP2: (57.418,175.283,81.412)
C4: (52.262,180.868,81.697)
O5': (55.965,177.014,80.353)
C3': (56.407,179.255,78.497)
C1': (54.102,179.568,78.186)
O4': (54.350,178.177,78.272)
C5': (56.149,176.731,78.965)
P: (56.053,175.852,81.436)
O2: (52.940,182.002,78.482)
C4': (55.766,177.928,78.132)
C2': (55.432,180.246,77.880)
O2': (55.554,180.360,76.474)
N1: (53.506,180.020,79.454)
N3: (52.272,181.669,80.631)
N4: (51.600,181.274,82.775)
C6: (53.523,179.226,80.568)
C5: (52.918,179.607,81.697)
O3': (57.708,179.391,77.943)
OP1: (54.889,174.958,81.270)
OP2: (57.418,175.283,81.412)
C4: (52.262,180.868,81.697)
O5': (55.965,177.014,80.353)
C3': (56.407,179.255,78.497)
C1': (54.102,179.568,78.186)
O4': (54.350,178.177,78.272)
C5': (56.149,176.731,78.965)
P: (56.053,175.852,81.436)
O2: (52.940,182.002,78.482)
C4': (55.766,177.928,78.132)
C2': (55.432,180.246,77.880)
O2': (55.554,180.360,76.474)
N1: (53.506,180.020,79.454)
N3: (52.272,181.669,80.631)
N4: (51.600,181.274,82.775)
C6: (53.523,179.226,80.568)
C5: (52.918,179.607,81.697)
O3': (57.708,179.391,77.943)
C2: (54.053,172.511,85.738)
OP1: (51.734,179.777,85.123)
OP2: (50.338,177.631,85.404)
C4: (51.749,172.355,85.963)
O5': (52.828,177.562,84.989)
C3': (55.150,176.043,83.869)
C1': (55.190,174.707,85.804)
O4': (54.865,176.036,86.185)
C5': (54.162,178.069,85.092)
P: (51.615,178.383,85.609)
O2: (55.169,171.997,85.578)
C4': (55.155,176.939,85.090)
C2': (55.804,174.780,84.405)
O2': (57.212,174.899,84.509)
N1: (53.957,173.897,85.855)
N3: (52.930,171.766,85.797)
N4: (50.673,171.586,86.029)
C6: (52.736,174.489,86.017)
C5: (51.620,173.763,86.074)
O3': (55.904,176.622,82.827)
OP1: (51.734,179.777,85.123)
OP2: (50.338,177.631,85.404)
C4: (51.749,172.355,85.963)
O5': (52.828,177.562,84.989)
C3': (55.150,176.043,83.869)
C1': (55.190,174.707,85.804)
O4': (54.865,176.036,86.185)
C5': (54.162,178.069,85.092)
P: (51.615,178.383,85.609)
O2: (55.169,171.997,85.578)
C4': (55.155,176.939,85.090)
C2': (55.804,174.780,84.405)
O2': (57.212,174.899,84.509)
N1: (53.957,173.897,85.855)
N3: (52.930,171.766,85.797)
N4: (50.673,171.586,86.029)
C6: (52.736,174.489,86.017)
C5: (51.620,173.763,86.074)
O3': (55.904,176.622,82.827)
Image (generated by PyMOL):