Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:A40:A11
Extra
PDB:
ATOM 1 O3' C A 39 3.133 -3.567 23.241 1.00 18.30 O
ATOM 2 P C A 40 3.126 -3.815 21.655 1.00 18.23 P
ATOM 3 OP1 C A 40 3.688 -5.168 21.435 1.00 18.87 O
ATOM 4 OP2 C A 40 3.801 -2.644 21.046 1.00 18.02 O
ATOM 5 O5' C A 40 1.571 -3.812 21.321 1.00 18.81 O
ATOM 6 C5' C A 40 0.857 -2.595 21.117 1.00 19.34 C
ATOM 7 C4' C A 40 -0.622 -2.840 21.245 1.00 20.32 C
ATOM 8 O4' C A 40 -0.910 -3.235 22.608 1.00 19.82 O
ATOM 9 C3' C A 40 -1.519 -1.635 21.016 1.00 21.14 C
ATOM 10 O3' C A 40 -1.777 -1.391 19.648 1.00 21.60 O
ATOM 11 C2' C A 40 -2.764 -1.986 21.823 1.00 21.43 C
ATOM 12 O2' C A 40 -3.546 -2.939 21.117 1.00 22.45 O
ATOM 13 C1' C A 40 -2.144 -2.694 23.024 1.00 20.16 C
ATOM 14 N1 C A 40 -1.871 -1.763 24.137 1.00 19.53 N
ATOM 15 C2 C A 40 -2.933 -1.317 24.924 1.00 19.50 C
ATOM 16 O2 C A 40 -4.078 -1.712 24.661 1.00 19.89 O
ATOM 17 N3 C A 40 -2.685 -0.468 25.946 1.00 19.08 N
ATOM 18 C4 C A 40 -1.438 -0.068 26.194 1.00 18.85 C
ATOM 19 N4 C A 40 -1.237 0.770 27.214 1.00 18.74 N
ATOM 20 C5 C A 40 -0.336 -0.510 25.408 1.00 19.05 C
ATOM 21 C6 C A 40 -0.596 -1.349 24.400 1.00 19.22 C
ATOM 22 P A A 41 -2.169 0.093 19.183 1.00 24.50 P
ATOM 23 OP1 A A 41 -2.273 0.077 17.703 1.00 25.12 O
ATOM 24 OP2 A A 41 -1.189 1.005 19.824 1.00 24.00 O
ATOM 25 O5' A A 41 -3.605 0.282 19.838 1.00 23.40 O
TER
ATOM 1 O3' A B 10 2.252 -0.540 28.579 1.00 18.08 O
ATOM 2 P C B 11 2.455 0.980 28.102 1.00 18.05 P
ATOM 3 OP1 C B 11 1.239 1.730 28.511 1.00 18.35 O
ATOM 4 OP2 C B 11 2.832 0.923 26.667 1.00 17.04 O
ATOM 5 O5' C B 11 3.706 1.414 28.983 1.00 16.95 O
ATOM 6 C5' C B 11 3.548 2.240 30.132 1.00 17.04 C
ATOM 7 C4' C B 11 4.760 2.120 31.012 1.00 17.33 C
ATOM 8 O4' C B 11 4.885 0.757 31.491 1.00 17.84 O
ATOM 9 C3' C B 11 6.091 2.409 30.337 1.00 17.85 C
ATOM 10 O3' C B 11 6.376 3.790 30.221 1.00 18.09 O
ATOM 11 C2' C B 11 7.068 1.641 31.223 1.00 18.36 C
ATOM 12 O2' C B 11 7.300 2.364 32.423 1.00 18.41 O
ATOM 13 C1' C B 11 6.249 0.399 31.576 1.00 18.14 C
ATOM 14 N1 C B 11 6.509 -0.712 30.635 1.00 17.88 N
ATOM 15 C2 C B 11 7.681 -1.461 30.780 1.00 18.08 C
ATOM 16 O2 C B 11 8.468 -1.174 31.694 1.00 18.07 O
ATOM 17 N3 C B 11 7.927 -2.475 29.920 1.00 18.09 N
ATOM 18 C4 C B 11 7.056 -2.754 28.949 1.00 18.17 C
ATOM 19 N4 C B 11 7.338 -3.766 28.123 1.00 18.01 N
ATOM 20 C5 C B 11 5.854 -2.008 28.780 1.00 17.51 C
ATOM 21 C6 C B 11 5.624 -1.007 29.636 1.00 17.47 C
ATOM 22 P C B 12 7.270 4.327 28.997 1.00 18.26 P
ATOM 23 OP1 C B 12 7.170 5.805 29.026 1.00 18.35 O
ATOM 24 OP2 C B 12 6.852 3.599 27.774 1.00 18.90 O
ATOM 25 O5' C B 12 8.720 3.850 29.437 1.00 18.41 O
TER
ATOM 2 P C A 40 3.126 -3.815 21.655 1.00 18.23 P
ATOM 3 OP1 C A 40 3.688 -5.168 21.435 1.00 18.87 O
ATOM 4 OP2 C A 40 3.801 -2.644 21.046 1.00 18.02 O
ATOM 5 O5' C A 40 1.571 -3.812 21.321 1.00 18.81 O
ATOM 6 C5' C A 40 0.857 -2.595 21.117 1.00 19.34 C
ATOM 7 C4' C A 40 -0.622 -2.840 21.245 1.00 20.32 C
ATOM 8 O4' C A 40 -0.910 -3.235 22.608 1.00 19.82 O
ATOM 9 C3' C A 40 -1.519 -1.635 21.016 1.00 21.14 C
ATOM 10 O3' C A 40 -1.777 -1.391 19.648 1.00 21.60 O
ATOM 11 C2' C A 40 -2.764 -1.986 21.823 1.00 21.43 C
ATOM 12 O2' C A 40 -3.546 -2.939 21.117 1.00 22.45 O
ATOM 13 C1' C A 40 -2.144 -2.694 23.024 1.00 20.16 C
ATOM 14 N1 C A 40 -1.871 -1.763 24.137 1.00 19.53 N
ATOM 15 C2 C A 40 -2.933 -1.317 24.924 1.00 19.50 C
ATOM 16 O2 C A 40 -4.078 -1.712 24.661 1.00 19.89 O
ATOM 17 N3 C A 40 -2.685 -0.468 25.946 1.00 19.08 N
ATOM 18 C4 C A 40 -1.438 -0.068 26.194 1.00 18.85 C
ATOM 19 N4 C A 40 -1.237 0.770 27.214 1.00 18.74 N
ATOM 20 C5 C A 40 -0.336 -0.510 25.408 1.00 19.05 C
ATOM 21 C6 C A 40 -0.596 -1.349 24.400 1.00 19.22 C
ATOM 22 P A A 41 -2.169 0.093 19.183 1.00 24.50 P
ATOM 23 OP1 A A 41 -2.273 0.077 17.703 1.00 25.12 O
ATOM 24 OP2 A A 41 -1.189 1.005 19.824 1.00 24.00 O
ATOM 25 O5' A A 41 -3.605 0.282 19.838 1.00 23.40 O
TER
ATOM 1 O3' A B 10 2.252 -0.540 28.579 1.00 18.08 O
ATOM 2 P C B 11 2.455 0.980 28.102 1.00 18.05 P
ATOM 3 OP1 C B 11 1.239 1.730 28.511 1.00 18.35 O
ATOM 4 OP2 C B 11 2.832 0.923 26.667 1.00 17.04 O
ATOM 5 O5' C B 11 3.706 1.414 28.983 1.00 16.95 O
ATOM 6 C5' C B 11 3.548 2.240 30.132 1.00 17.04 C
ATOM 7 C4' C B 11 4.760 2.120 31.012 1.00 17.33 C
ATOM 8 O4' C B 11 4.885 0.757 31.491 1.00 17.84 O
ATOM 9 C3' C B 11 6.091 2.409 30.337 1.00 17.85 C
ATOM 10 O3' C B 11 6.376 3.790 30.221 1.00 18.09 O
ATOM 11 C2' C B 11 7.068 1.641 31.223 1.00 18.36 C
ATOM 12 O2' C B 11 7.300 2.364 32.423 1.00 18.41 O
ATOM 13 C1' C B 11 6.249 0.399 31.576 1.00 18.14 C
ATOM 14 N1 C B 11 6.509 -0.712 30.635 1.00 17.88 N
ATOM 15 C2 C B 11 7.681 -1.461 30.780 1.00 18.08 C
ATOM 16 O2 C B 11 8.468 -1.174 31.694 1.00 18.07 O
ATOM 17 N3 C B 11 7.927 -2.475 29.920 1.00 18.09 N
ATOM 18 C4 C B 11 7.056 -2.754 28.949 1.00 18.17 C
ATOM 19 N4 C B 11 7.338 -3.766 28.123 1.00 18.01 N
ATOM 20 C5 C B 11 5.854 -2.008 28.780 1.00 17.51 C
ATOM 21 C6 C B 11 5.624 -1.007 29.636 1.00 17.47 C
ATOM 22 P C B 12 7.270 4.327 28.997 1.00 18.26 P
ATOM 23 OP1 C B 12 7.170 5.805 29.026 1.00 18.35 O
ATOM 24 OP2 C B 12 6.852 3.599 27.774 1.00 18.90 O
ATOM 25 O5' C B 12 8.720 3.850 29.437 1.00 18.41 O
TER
Atoms:
C2: (-2.933,-1.317,24.924)
OP1: (3.688,-5.168,21.435)
OP2: (3.801,-2.644,21.046)
C4: (-1.438,-0.068,26.194)
O5': (1.571,-3.812,21.321)
C3': (-1.519,-1.635,21.016)
C1': (-2.144,-2.694,23.024)
O4': (-0.910,-3.235,22.608)
C5': (0.857,-2.595,21.117)
P: (3.126,-3.815,21.655)
O2: (-4.078,-1.712,24.661)
C4': (-0.622,-2.840,21.245)
C2': (-2.764,-1.986,21.823)
O2': (-3.546,-2.939,21.117)
N1: (-1.871,-1.763,24.137)
N3: (-2.685,-0.468,25.946)
N4: (-1.237,0.770,27.214)
C6: (-0.596,-1.349,24.400)
C5: (-0.336,-0.510,25.408)
O3': (-1.777,-1.391,19.648)
OP1: (3.688,-5.168,21.435)
OP2: (3.801,-2.644,21.046)
C4: (-1.438,-0.068,26.194)
O5': (1.571,-3.812,21.321)
C3': (-1.519,-1.635,21.016)
C1': (-2.144,-2.694,23.024)
O4': (-0.910,-3.235,22.608)
C5': (0.857,-2.595,21.117)
P: (3.126,-3.815,21.655)
O2: (-4.078,-1.712,24.661)
C4': (-0.622,-2.840,21.245)
C2': (-2.764,-1.986,21.823)
O2': (-3.546,-2.939,21.117)
N1: (-1.871,-1.763,24.137)
N3: (-2.685,-0.468,25.946)
N4: (-1.237,0.770,27.214)
C6: (-0.596,-1.349,24.400)
C5: (-0.336,-0.510,25.408)
O3': (-1.777,-1.391,19.648)
C2: (7.681,-1.461,30.780)
OP1: (1.239,1.730,28.511)
OP2: (2.832,0.923,26.667)
C4: (7.056,-2.754,28.949)
O5': (3.706,1.414,28.983)
C3': (6.091,2.409,30.337)
C1': (6.249,0.399,31.576)
O4': (4.885,0.757,31.491)
C5': (3.548,2.240,30.132)
P: (2.455,0.980,28.102)
O2: (8.468,-1.174,31.694)
C4': (4.760,2.120,31.012)
C2': (7.068,1.641,31.223)
O2': (7.300,2.364,32.423)
N1: (6.509,-0.712,30.635)
N3: (7.927,-2.475,29.920)
N4: (7.338,-3.766,28.123)
C6: (5.624,-1.007,29.636)
C5: (5.854,-2.008,28.780)
O3': (6.376,3.790,30.221)
OP1: (1.239,1.730,28.511)
OP2: (2.832,0.923,26.667)
C4: (7.056,-2.754,28.949)
O5': (3.706,1.414,28.983)
C3': (6.091,2.409,30.337)
C1': (6.249,0.399,31.576)
O4': (4.885,0.757,31.491)
C5': (3.548,2.240,30.132)
P: (2.455,0.980,28.102)
O2: (8.468,-1.174,31.694)
C4': (4.760,2.120,31.012)
C2': (7.068,1.641,31.223)
O2': (7.300,2.364,32.423)
N1: (6.509,-0.712,30.635)
N3: (7.927,-2.475,29.920)
N4: (7.338,-3.766,28.123)
C6: (5.624,-1.007,29.636)
C5: (5.854,-2.008,28.780)
O3': (6.376,3.790,30.221)
Image (generated by PyMOL):