Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B40:B11
Extra
PDB:
ATOM 1 O3' C A 39 -22.386 1.063 13.012 1.00 27.12 O
ATOM 2 P C A 40 -21.260 1.451 11.931 1.00 28.77 P
ATOM 3 OP1 C A 40 -21.688 2.695 11.242 1.00 26.69 O
ATOM 4 OP2 C A 40 -21.012 0.229 11.126 1.00 26.71 O
ATOM 5 O5' C A 40 -20.027 1.752 12.889 1.00 27.32 O
ATOM 6 C5' C A 40 -19.223 0.692 13.400 1.00 25.83 C
ATOM 7 C4' C A 40 -18.447 1.157 14.602 1.00 25.89 C
ATOM 8 O4' C A 40 -19.368 1.424 15.688 1.00 25.36 O
ATOM 9 C3' C A 40 -17.489 0.133 15.181 1.00 25.85 C
ATOM 10 O3' C A 40 -16.262 0.105 14.480 1.00 26.24 O
ATOM 11 C2' C A 40 -17.375 0.560 16.641 1.00 25.32 C
ATOM 12 O2' C A 40 -16.522 1.692 16.753 1.00 25.42 O
ATOM 13 C1' C A 40 -18.804 1.021 16.918 1.00 24.67 C
ATOM 14 N1 C A 40 -19.643 -0.065 17.466 1.00 23.97 N
ATOM 15 C2 C A 40 -19.538 -0.387 18.820 1.00 23.66 C
ATOM 16 O2 C A 40 -18.736 0.245 19.522 1.00 24.06 O
ATOM 17 N3 C A 40 -20.306 -1.378 19.326 1.00 23.15 N
ATOM 18 C4 C A 40 -21.155 -2.032 18.534 1.00 23.50 C
ATOM 19 N4 C A 40 -21.896 -3.002 19.074 1.00 23.35 N
ATOM 20 C5 C A 40 -21.285 -1.723 17.151 1.00 24.12 C
ATOM 21 C6 C A 40 -20.518 -0.742 16.664 1.00 24.21 C
ATOM 22 P A A 41 -15.468 -1.280 14.321 1.00 28.66 P
ATOM 23 OP1 A A 41 -14.389 -0.982 13.346 1.00 27.56 O
ATOM 24 OP2 A A 41 -16.456 -2.349 14.013 1.00 26.02 O
ATOM 25 O5' A A 41 -14.874 -1.488 15.783 1.00 24.99 O
TER
ATOM 1 O3' A B 10 -25.348 -2.259 17.093 1.00 27.43 O
ATOM 2 P C B 11 -24.899 -3.755 16.735 1.00 27.32 P
ATOM 3 OP1 C B 11 -24.397 -4.402 17.973 1.00 26.66 O
ATOM 4 OP2 C B 11 -24.000 -3.621 15.562 1.00 26.88 O
ATOM 5 O5' C B 11 -26.290 -4.392 16.300 1.00 29.16 O
ATOM 6 C5' C B 11 -26.936 -5.378 17.102 1.00 29.76 C
ATOM 7 C4' C B 11 -28.382 -5.492 16.701 1.00 30.56 C
ATOM 8 O4' C B 11 -29.035 -4.210 16.884 1.00 29.79 O
ATOM 9 C3' C B 11 -28.633 -5.830 15.242 1.00 31.73 C
ATOM 10 O3' C B 11 -28.513 -7.206 14.950 1.00 32.57 O
ATOM 11 C2' C B 11 -30.033 -5.271 15.012 1.00 31.98 C
ATOM 12 O2' C B 11 -30.996 -6.147 15.580 1.00 31.90 O
ATOM 13 C1' C B 11 -29.987 -4.003 15.862 1.00 30.89 C
ATOM 14 N1 C B 11 -29.570 -2.833 15.059 1.00 30.75 N
ATOM 15 C2 C B 11 -30.503 -2.240 14.205 1.00 31.06 C
ATOM 16 O2 C B 11 -31.647 -2.714 14.150 1.00 31.70 O
ATOM 17 N3 C B 11 -30.136 -1.172 13.463 1.00 30.33 N
ATOM 18 C4 C B 11 -28.896 -0.695 13.555 1.00 30.24 C
ATOM 19 N4 C B 11 -28.577 0.362 12.806 1.00 30.49 N
ATOM 20 C5 C B 11 -27.924 -1.279 14.417 1.00 29.50 C
ATOM 21 C6 C B 11 -28.300 -2.337 15.145 1.00 29.42 C
ATOM 22 P C B 12 -28.092 -7.643 13.464 1.00 34.81 P
ATOM 23 OP1 C B 12 -27.932 -9.119 13.485 1.00 35.53 O
ATOM 24 OP2 C B 12 -26.935 -6.794 13.082 1.00 32.81 O
ATOM 25 O5' C B 12 -29.373 -7.235 12.613 1.00 35.41 O
TER
ATOM 2 P C A 40 -21.260 1.451 11.931 1.00 28.77 P
ATOM 3 OP1 C A 40 -21.688 2.695 11.242 1.00 26.69 O
ATOM 4 OP2 C A 40 -21.012 0.229 11.126 1.00 26.71 O
ATOM 5 O5' C A 40 -20.027 1.752 12.889 1.00 27.32 O
ATOM 6 C5' C A 40 -19.223 0.692 13.400 1.00 25.83 C
ATOM 7 C4' C A 40 -18.447 1.157 14.602 1.00 25.89 C
ATOM 8 O4' C A 40 -19.368 1.424 15.688 1.00 25.36 O
ATOM 9 C3' C A 40 -17.489 0.133 15.181 1.00 25.85 C
ATOM 10 O3' C A 40 -16.262 0.105 14.480 1.00 26.24 O
ATOM 11 C2' C A 40 -17.375 0.560 16.641 1.00 25.32 C
ATOM 12 O2' C A 40 -16.522 1.692 16.753 1.00 25.42 O
ATOM 13 C1' C A 40 -18.804 1.021 16.918 1.00 24.67 C
ATOM 14 N1 C A 40 -19.643 -0.065 17.466 1.00 23.97 N
ATOM 15 C2 C A 40 -19.538 -0.387 18.820 1.00 23.66 C
ATOM 16 O2 C A 40 -18.736 0.245 19.522 1.00 24.06 O
ATOM 17 N3 C A 40 -20.306 -1.378 19.326 1.00 23.15 N
ATOM 18 C4 C A 40 -21.155 -2.032 18.534 1.00 23.50 C
ATOM 19 N4 C A 40 -21.896 -3.002 19.074 1.00 23.35 N
ATOM 20 C5 C A 40 -21.285 -1.723 17.151 1.00 24.12 C
ATOM 21 C6 C A 40 -20.518 -0.742 16.664 1.00 24.21 C
ATOM 22 P A A 41 -15.468 -1.280 14.321 1.00 28.66 P
ATOM 23 OP1 A A 41 -14.389 -0.982 13.346 1.00 27.56 O
ATOM 24 OP2 A A 41 -16.456 -2.349 14.013 1.00 26.02 O
ATOM 25 O5' A A 41 -14.874 -1.488 15.783 1.00 24.99 O
TER
ATOM 1 O3' A B 10 -25.348 -2.259 17.093 1.00 27.43 O
ATOM 2 P C B 11 -24.899 -3.755 16.735 1.00 27.32 P
ATOM 3 OP1 C B 11 -24.397 -4.402 17.973 1.00 26.66 O
ATOM 4 OP2 C B 11 -24.000 -3.621 15.562 1.00 26.88 O
ATOM 5 O5' C B 11 -26.290 -4.392 16.300 1.00 29.16 O
ATOM 6 C5' C B 11 -26.936 -5.378 17.102 1.00 29.76 C
ATOM 7 C4' C B 11 -28.382 -5.492 16.701 1.00 30.56 C
ATOM 8 O4' C B 11 -29.035 -4.210 16.884 1.00 29.79 O
ATOM 9 C3' C B 11 -28.633 -5.830 15.242 1.00 31.73 C
ATOM 10 O3' C B 11 -28.513 -7.206 14.950 1.00 32.57 O
ATOM 11 C2' C B 11 -30.033 -5.271 15.012 1.00 31.98 C
ATOM 12 O2' C B 11 -30.996 -6.147 15.580 1.00 31.90 O
ATOM 13 C1' C B 11 -29.987 -4.003 15.862 1.00 30.89 C
ATOM 14 N1 C B 11 -29.570 -2.833 15.059 1.00 30.75 N
ATOM 15 C2 C B 11 -30.503 -2.240 14.205 1.00 31.06 C
ATOM 16 O2 C B 11 -31.647 -2.714 14.150 1.00 31.70 O
ATOM 17 N3 C B 11 -30.136 -1.172 13.463 1.00 30.33 N
ATOM 18 C4 C B 11 -28.896 -0.695 13.555 1.00 30.24 C
ATOM 19 N4 C B 11 -28.577 0.362 12.806 1.00 30.49 N
ATOM 20 C5 C B 11 -27.924 -1.279 14.417 1.00 29.50 C
ATOM 21 C6 C B 11 -28.300 -2.337 15.145 1.00 29.42 C
ATOM 22 P C B 12 -28.092 -7.643 13.464 1.00 34.81 P
ATOM 23 OP1 C B 12 -27.932 -9.119 13.485 1.00 35.53 O
ATOM 24 OP2 C B 12 -26.935 -6.794 13.082 1.00 32.81 O
ATOM 25 O5' C B 12 -29.373 -7.235 12.613 1.00 35.41 O
TER
Atoms:
C2: (-19.538,-0.387,18.820)
OP1: (-21.688,2.695,11.242)
OP2: (-21.012,0.229,11.126)
C4: (-21.155,-2.032,18.534)
O5': (-20.027,1.752,12.889)
C3': (-17.489,0.133,15.181)
C1': (-18.804,1.021,16.918)
O4': (-19.368,1.424,15.688)
C5': (-19.223,0.692,13.400)
P: (-21.260,1.451,11.931)
O2: (-18.736,0.245,19.522)
C4': (-18.447,1.157,14.602)
C2': (-17.375,0.560,16.641)
O2': (-16.522,1.692,16.753)
N1: (-19.643,-0.065,17.466)
N3: (-20.306,-1.378,19.326)
N4: (-21.896,-3.002,19.074)
C6: (-20.518,-0.742,16.664)
C5: (-21.285,-1.723,17.151)
O3': (-16.262,0.105,14.480)
OP1: (-21.688,2.695,11.242)
OP2: (-21.012,0.229,11.126)
C4: (-21.155,-2.032,18.534)
O5': (-20.027,1.752,12.889)
C3': (-17.489,0.133,15.181)
C1': (-18.804,1.021,16.918)
O4': (-19.368,1.424,15.688)
C5': (-19.223,0.692,13.400)
P: (-21.260,1.451,11.931)
O2: (-18.736,0.245,19.522)
C4': (-18.447,1.157,14.602)
C2': (-17.375,0.560,16.641)
O2': (-16.522,1.692,16.753)
N1: (-19.643,-0.065,17.466)
N3: (-20.306,-1.378,19.326)
N4: (-21.896,-3.002,19.074)
C6: (-20.518,-0.742,16.664)
C5: (-21.285,-1.723,17.151)
O3': (-16.262,0.105,14.480)
C2: (-30.503,-2.240,14.205)
OP1: (-24.397,-4.402,17.973)
OP2: (-24.000,-3.621,15.562)
C4: (-28.896,-0.695,13.555)
O5': (-26.290,-4.392,16.300)
C3': (-28.633,-5.830,15.242)
C1': (-29.987,-4.003,15.862)
O4': (-29.035,-4.210,16.884)
C5': (-26.936,-5.378,17.102)
P: (-24.899,-3.755,16.735)
O2: (-31.647,-2.714,14.150)
C4': (-28.382,-5.492,16.701)
C2': (-30.033,-5.271,15.012)
O2': (-30.996,-6.147,15.580)
N1: (-29.570,-2.833,15.059)
N3: (-30.136,-1.172,13.463)
N4: (-28.577,0.362,12.806)
C6: (-28.300,-2.337,15.145)
C5: (-27.924,-1.279,14.417)
O3': (-28.513,-7.206,14.950)
OP1: (-24.397,-4.402,17.973)
OP2: (-24.000,-3.621,15.562)
C4: (-28.896,-0.695,13.555)
O5': (-26.290,-4.392,16.300)
C3': (-28.633,-5.830,15.242)
C1': (-29.987,-4.003,15.862)
O4': (-29.035,-4.210,16.884)
C5': (-26.936,-5.378,17.102)
P: (-24.899,-3.755,16.735)
O2: (-31.647,-2.714,14.150)
C4': (-28.382,-5.492,16.701)
C2': (-30.033,-5.271,15.012)
O2': (-30.996,-6.147,15.580)
N1: (-29.570,-2.833,15.059)
N3: (-30.136,-1.172,13.463)
N4: (-28.577,0.362,12.806)
C6: (-28.300,-2.337,15.145)
C5: (-27.924,-1.279,14.417)
O3': (-28.513,-7.206,14.950)
Image (generated by PyMOL):